Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm22683-201ENSMUST00000082854 137 ntBASIC1.62□□□□□ -2.15
Lire1P11260 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.61□□□□□ -2.15
Lire1P11260 Gm8121-201ENSMUST00000153583 499 ntBASIC1.61□□□□□ -2.15
Lire1P11260 Gm22551-201ENSMUST00000157795 103 ntBASIC1.61□□□□□ -2.15
Lire1P11260 Gm24577-201ENSMUST00000158580 63 ntBASIC1.61□□□□□ -2.15
Lire1P11260 Gm23208-201ENSMUST00000158666 127 ntBASIC1.61□□□□□ -2.15
Lire1P11260 Gm26335-201ENSMUST00000178449 107 ntBASIC1.61□□□□□ -2.15
Lire1P11260 Gm37054-201ENSMUST00000193481 543 ntBASIC1.61□□□□□ -2.15
Lire1P11260 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
Lire1P11260 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Lire1P11260 Mir340-201ENSMUST00000083483 98 ntBASIC1.61□□□□□ -2.15
Lire1P11260 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Lire1P11260 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
Lire1P11260 Gm25832-201ENSMUST00000104140 130 ntBASIC1.6□□□□□ -2.15
Lire1P11260 Gm14287-201ENSMUST00000121060 117 ntBASIC1.6□□□□□ -2.15
Lire1P11260 Gm26038-201ENSMUST00000158151 106 ntBASIC1.6□□□□□ -2.15
Lire1P11260 Gm24668-201ENSMUST00000158935 104 ntBASIC1.6□□□□□ -2.15
Lire1P11260 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.6□□□□□ -2.15
Lire1P11260 Gm28648-201ENSMUST00000190092 343 ntBASIC1.6□□□□□ -2.15
Lire1P11260 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.6□□□□□ -2.15
Lire1P11260 Gm44491-201ENSMUST00000196794 96 ntBASIC1.6□□□□□ -2.15
Lire1P11260 Snord68-201ENSMUST00000082516 86 ntBASIC1.6□□□□□ -2.15
Lire1P11260 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.6□□□□□ -2.15
Lire1P11260 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.15
Lire1P11260 Gm12255-201ENSMUST00000117184 284 ntBASIC1.59□□□□□ -2.15
Lire1P11260 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Lire1P11260 Gm26004-201ENSMUST00000158804 116 ntBASIC1.59□□□□□ -2.15
Lire1P11260 Mir8116-201ENSMUST00000184134 97 ntBASIC1.59□□□□□ -2.15
Lire1P11260 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.59□□□□□ -2.15
Lire1P11260 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.59□□□□□ -2.15
Lire1P11260 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC1.59□□□□□ -2.15
Lire1P11260 Gm5899-201ENSMUST00000071770 270 ntBASIC1.59□□□□□ -2.15
Lire1P11260 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.58□□□□□ -2.16
Lire1P11260 Gm11862-201ENSMUST00000119678 659 ntBASIC1.58□□□□□ -2.16
Lire1P11260 Gm15214-201ENSMUST00000122155 470 ntBASIC1.58□□□□□ -2.16
Lire1P11260 Gm25543-201ENSMUST00000122678 312 ntBASIC1.58□□□□□ -2.16
Lire1P11260 Gm22944-201ENSMUST00000158662 133 ntBASIC1.58□□□□□ -2.16
Lire1P11260 Traj60-201ENSMUST00000167781 54 ntBASIC1.58□□□□□ -2.16
Lire1P11260 Gm27957-201ENSMUST00000184054 127 ntBASIC1.58□□□□□ -2.16
Lire1P11260 Gm29661-201ENSMUST00000186781 315 ntBASIC1.58□□□□□ -2.16
Lire1P11260 Gm29308-201ENSMUST00000188863 315 ntBASIC1.58□□□□□ -2.16
Lire1P11260 Gm26249-201ENSMUST00000116708 118 ntBASIC1.57□□□□□ -2.16
Lire1P11260 Gm12512-201ENSMUST00000119620 217 ntBASIC1.57□□□□□ -2.16
Lire1P11260 Gm11857-201ENSMUST00000119817 324 ntBASIC1.57□□□□□ -2.16
Lire1P11260 Gm27493-201ENSMUST00000184128 78 ntBASIC1.57□□□□□ -2.16
Lire1P11260 Gm27919-201ENSMUST00000185163 107 ntBASIC1.57□□□□□ -2.16
Lire1P11260 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Lire1P11260 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
Lire1P11260 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
Lire1P11260 Gm5001-201ENSMUST00000204361 331 ntBASIC1.57□□□□□ -2.16
Lire1P11260 AC124542.1-201ENSMUST00000205588 908 ntBASIC1.57□□□□□ -2.16
Lire1P11260 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.57□□□□□ -2.16
Lire1P11260 Gm25038-201ENSMUST00000082928 130 ntBASIC1.57□□□□□ -2.16
Lire1P11260 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
Lire1P11260 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Lire1P11260 Gm22761-201ENSMUST00000102278 96 ntBASIC1.56□□□□□ -2.16
Lire1P11260 Gm14293-201ENSMUST00000118528 577 ntBASIC1.56□□□□□ -2.16
Lire1P11260 Gm22663-201ENSMUST00000158721 102 ntBASIC1.56□□□□□ -2.16
Lire1P11260 Gm18588-201ENSMUST00000177308 492 ntBASIC1.56□□□□□ -2.16
Lire1P11260 Gm27248-201ENSMUST00000184004 166 ntBASIC1.56□□□□□ -2.16
Lire1P11260 Gm28794-201ENSMUST00000185276 136 ntBASIC1.56□□□□□ -2.16
Lire1P11260 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.56□□□□□ -2.16
Lire1P11260 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.56□□□□□ -2.16
Lire1P11260 Gm18113-201ENSMUST00000220630 303 ntBASIC1.56□□□□□ -2.16
Lire1P11260 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.56□□□□□ -2.16
Lire1P11260 AC192333.2-201ENSMUST00000224771 196 ntBASIC1.56□□□□□ -2.16
Lire1P11260 Snord96a-201ENSMUST00000082791 81 ntBASIC1.56□□□□□ -2.16
Lire1P11260 Mir148b-201ENSMUST00000083626 97 ntBASIC1.56□□□□□ -2.16
Lire1P11260 Gm26314-201ENSMUST00000083891 107 ntBASIC1.56□□□□□ -2.16
Lire1P11260 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.56□□□□□ -2.16
Lire1P11260 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Lire1P11260 Gm11358-201ENSMUST00000122310 373 ntBASIC1.55□□□□□ -2.16
Lire1P11260 Gm25279-201ENSMUST00000122608 133 ntBASIC1.55□□□□□ -2.16
Lire1P11260 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC1.55□□□□□ -2.16
Lire1P11260 Gm24366-201ENSMUST00000175383 86 ntBASIC1.55□□□□□ -2.16
Lire1P11260 Gm24572-201ENSMUST00000175505 88 ntBASIC1.55□□□□□ -2.16
Lire1P11260 Gm28409-201ENSMUST00000187064 103 ntBASIC1.55□□□□□ -2.16
Lire1P11260 Gm43487-201ENSMUST00000200331 1031 ntBASIC1.55□□□□□ -2.16
Lire1P11260 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1.55□□□□□ -2.16
Lire1P11260 Gm44962-201ENSMUST00000206460 279 ntBASIC1.55□□□□□ -2.16
Lire1P11260 Gm26493-201ENSMUST00000083155 136 ntBASIC1.55□□□□□ -2.16
Lire1P11260 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Lire1P11260 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Lire1P11260 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Lire1P11260 Gm14882-201ENSMUST00000117216 218 ntBASIC1.54□□□□□ -2.16
Lire1P11260 Gm13992-201ENSMUST00000120558 156 ntBASIC1.54□□□□□ -2.16
Lire1P11260 Gm24551-201ENSMUST00000158645 92 ntBASIC1.54□□□□□ -2.16
Lire1P11260 Gm22129-201ENSMUST00000179034 107 ntBASIC1.54□□□□□ -2.16
Lire1P11260 Mir7675-201ENSMUST00000184262 58 ntBASIC1.54□□□□□ -2.16
Lire1P11260 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Lire1P11260 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Lire1P11260 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.54□□□□□ -2.16
Lire1P11260 AC116589.9-201ENSMUST00000221462 908 ntBASIC1.54□□□□□ -2.16
Lire1P11260 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.54□□□□□ -2.16
Lire1P11260 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.16
Lire1P11260 Gm15526-201ENSMUST00000112504 204 ntBASIC1.53□□□□□ -2.16
Lire1P11260 Gm17148-201ENSMUST00000164702 249 ntBASIC1.53□□□□□ -2.16
Lire1P11260 Gm29167-201ENSMUST00000190024 377 ntBASIC1.53□□□□□ -2.16
Lire1P11260 Gm26265-202ENSMUST00000196326 133 ntBASIC1.53□□□□□ -2.16
Lire1P11260 Gm46993-201ENSMUST00000220708 259 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms