Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Gm37054-201ENSMUST00000193481 543 ntBASIC2.08□□□□□ -2.08
NefmP08553 Gm44654-201ENSMUST00000208052 329 ntBASIC2.08□□□□□ -2.08
NefmP08553 Gm7495-201ENSMUST00000215099 426 ntBASIC2.08□□□□□ -2.08
NefmP08553 Mir92-2-201ENSMUST00000083679 91 ntBASIC2.08□□□□□ -2.08
NefmP08553 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
NefmP08553 Gm6829-201ENSMUST00000119858 360 ntBASIC2.07□□□□□ -2.08
NefmP08553 Gm11606-201ENSMUST00000120706 617 ntBASIC2.07□□□□□ -2.08
NefmP08553 Gm3027-201ENSMUST00000167579 451 ntBASIC2.07□□□□□ -2.08
NefmP08553 Gm29397-201ENSMUST00000185205 333 ntBASIC2.07□□□□□ -2.08
NefmP08553 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
NefmP08553 Gm16976-205ENSMUST00000227324 226 ntBASIC2.07□□□□□ -2.08
NefmP08553 Gm25579-201ENSMUST00000083407 106 ntBASIC2.07□□□□□ -2.08
NefmP08553 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.07□□□□□ -2.08
NefmP08553 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.07□□□□□ -2.08
NefmP08553 Gm25759-201ENSMUST00000103988 129 ntBASIC2.06□□□□□ -2.08
NefmP08553 Gm22193-201ENSMUST00000116868 76 ntBASIC2.06□□□□□ -2.08
NefmP08553 Gm23169-201ENSMUST00000157157 112 ntBASIC2.06□□□□□ -2.08
NefmP08553 Gm23854-201ENSMUST00000158378 108 ntBASIC2.06□□□□□ -2.08
NefmP08553 Gm24085-201ENSMUST00000175172 116 ntBASIC2.06□□□□□ -2.08
NefmP08553 Gm23090-201ENSMUST00000177331 78 ntBASIC2.06□□□□□ -2.08
NefmP08553 Mir8090-201ENSMUST00000185078 136 ntBASIC2.06□□□□□ -2.08
NefmP08553 Gm37128-201ENSMUST00000192599 232 ntBASIC2.06□□□□□ -2.08
NefmP08553 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC2.06□□□□□ -2.08
NefmP08553 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.06□□□□□ -2.08
NefmP08553 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
NefmP08553 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.05□□□□□ -2.08
NefmP08553 Gm25992-201ENSMUST00000102437 109 ntBASIC2.05□□□□□ -2.08
NefmP08553 Gm25543-201ENSMUST00000122678 312 ntBASIC2.05□□□□□ -2.08
NefmP08553 Gm23170-201ENSMUST00000157158 106 ntBASIC2.05□□□□□ -2.08
NefmP08553 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC2.05□□□□□ -2.08
NefmP08553 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
NefmP08553 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC2.05□□□□□ -2.08
NefmP08553 Gm14797-201ENSMUST00000119378 1480 ntBASIC2.05□□□□□ -2.08
NefmP08553 Gm14296-202ENSMUST00000108931 750 ntBASIC2.04□□□□□ -2.08
NefmP08553 Gm26249-201ENSMUST00000116708 118 ntBASIC2.04□□□□□ -2.08
NefmP08553 Gm12417-201ENSMUST00000119153 403 ntBASIC2.04□□□□□ -2.08
NefmP08553 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC2.04□□□□□ -2.08
NefmP08553 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
NefmP08553 Gm22099-201ENSMUST00000157925 123 ntBASIC2.04□□□□□ -2.08
NefmP08553 Gm24551-201ENSMUST00000158645 92 ntBASIC2.04□□□□□ -2.08
NefmP08553 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC2.04□□□□□ -2.08
NefmP08553 Gm29613-201ENSMUST00000185846 313 ntBASIC2.04□□□□□ -2.08
NefmP08553 Gm29544-201ENSMUST00000188860 313 ntBASIC2.04□□□□□ -2.08
NefmP08553 Gm28848-201ENSMUST00000189984 168 ntBASIC2.04□□□□□ -2.08
NefmP08553 Gm21064-202ENSMUST00000190583 278 ntBASIC2.04□□□□□ -2.08
NefmP08553 Gm28808-201ENSMUST00000190978 313 ntBASIC2.04□□□□□ -2.08
NefmP08553 Gm8125-201ENSMUST00000216602 738 ntBASIC2.04□□□□□ -2.08
NefmP08553 Gm24615-201ENSMUST00000083268 113 ntBASIC2.04□□□□□ -2.08
NefmP08553 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
NefmP08553 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
NefmP08553 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
NefmP08553 Gm28995-201ENSMUST00000186625 261 ntBASIC2.03□□□□□ -2.08
NefmP08553 Gm9156-201ENSMUST00000189660 463 ntBASIC2.03□□□□□ -2.08
NefmP08553 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
NefmP08553 AC147560.1-201ENSMUST00000197528 107 ntBASIC2.03□□□□□ -2.08
NefmP08553 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC2.03□□□□□ -2.08
NefmP08553 Gm25068-201ENSMUST00000103895 110 ntBASIC2.02□□□□□ -2.09
NefmP08553 Gm12433-201ENSMUST00000119659 255 ntBASIC2.02□□□□□ -2.09
NefmP08553 Gm22027-201ENSMUST00000122737 127 ntBASIC2.02□□□□□ -2.09
NefmP08553 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
NefmP08553 Gm44408-201ENSMUST00000200205 66 ntBASIC2.02□□□□□ -2.09
NefmP08553 CT025526.1-201ENSMUST00000217327 267 ntBASIC2.02□□□□□ -2.09
NefmP08553 AC153526.1-201ENSMUST00000219750 190 ntBASIC2.02□□□□□ -2.09
NefmP08553 AC131720.2-201ENSMUST00000220420 431 ntBASIC2.02□□□□□ -2.09
NefmP08553 Snord68-201ENSMUST00000082516 86 ntBASIC2.02□□□□□ -2.09
NefmP08553 Gm23015-201ENSMUST00000104145 128 ntBASIC2.01□□□□□ -2.09
NefmP08553 Gm25773-201ENSMUST00000116718 127 ntBASIC2.01□□□□□ -2.09
NefmP08553 Gm12309-201ENSMUST00000119889 182 ntBASIC2.01□□□□□ -2.09
NefmP08553 Gm25371-201ENSMUST00000158162 101 ntBASIC2.01□□□□□ -2.09
NefmP08553 Gm24005-201ENSMUST00000158459 296 ntBASIC2.01□□□□□ -2.09
NefmP08553 Gm17100-201ENSMUST00000168963 272 ntBASIC2.01□□□□□ -2.09
NefmP08553 Gm44465-201ENSMUST00000199536 114 ntBASIC2.01□□□□□ -2.09
NefmP08553 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.01□□□□□ -2.09
NefmP08553 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC2.01□□□□□ -2.09
NefmP08553 Gm23731-201ENSMUST00000083749 107 ntBASIC2.01□□□□□ -2.09
NefmP08553 Gm24915-201ENSMUST00000157288 78 ntBASIC2□□□□□ -2.09
NefmP08553 Gm25423-201ENSMUST00000157609 107 ntBASIC2□□□□□ -2.09
NefmP08553 Gm24498-201ENSMUST00000158445 102 ntBASIC2□□□□□ -2.09
NefmP08553 Mir3057-201ENSMUST00000175040 91 ntBASIC2□□□□□ -2.09
NefmP08553 Gm29603-201ENSMUST00000186792 334 ntBASIC2□□□□□ -2.09
NefmP08553 Gm43035-201ENSMUST00000197626 517 ntBASIC2□□□□□ -2.09
NefmP08553 Gm45456-201ENSMUST00000210841 243 ntBASIC2□□□□□ -2.09
NefmP08553 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
NefmP08553 Gm26164-201ENSMUST00000083793 104 ntBASIC2□□□□□ -2.09
NefmP08553 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
NefmP08553 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC1.99□□□□□ -2.09
NefmP08553 Gm23191-201ENSMUST00000179147 107 ntBASIC1.99□□□□□ -2.09
NefmP08553 Gm27421-201ENSMUST00000184729 167 ntBASIC1.99□□□□□ -2.09
NefmP08553 Gm20257-202ENSMUST00000188643 130 ntBASIC1.99□□□□□ -2.09
NefmP08553 Gm37162-201ENSMUST00000191708 551 ntBASIC1.99□□□□□ -2.09
NefmP08553 Gm44483-201ENSMUST00000197203 97 ntBASIC1.99□□□□□ -2.09
NefmP08553 Gm44320-201ENSMUST00000199276 86 ntBASIC1.99□□□□□ -2.09
NefmP08553 Gm10092-201ENSMUST00000077110 180 ntBASIC1.99□□□□□ -2.09
NefmP08553 Snord14a-201ENSMUST00000082807 87 ntBASIC1.99□□□□□ -2.09
NefmP08553 Mir340-201ENSMUST00000083483 98 ntBASIC1.99□□□□□ -2.09
NefmP08553 Gm26180-201ENSMUST00000179942 107 ntBASIC1.98□□□□□ -2.09
NefmP08553 Gm27493-201ENSMUST00000184128 78 ntBASIC1.98□□□□□ -2.09
NefmP08553 Mir6419-201ENSMUST00000184784 113 ntBASIC1.98□□□□□ -2.09
NefmP08553 Gm19901-201ENSMUST00000192191 495 ntBASIC1.98□□□□□ -2.09
NefmP08553 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms