Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm22984-201ENSMUST00000122751 122 ntBASIC2.5□□□□□ -2.01
Col3a1P08121 Gm28020-201ENSMUST00000157739 67 ntBASIC2.5□□□□□ -2.01
Col3a1P08121 Gm23342-201ENSMUST00000158958 115 ntBASIC2.5□□□□□ -2.01
Col3a1P08121 Gm22118-201ENSMUST00000175593 171 ntBASIC2.5□□□□□ -2.01
Col3a1P08121 Gm27465-201ENSMUST00000184290 91 ntBASIC2.5□□□□□ -2.01
Col3a1P08121 Gm28453-203ENSMUST00000187041 189 ntBASIC2.5□□□□□ -2.01
Col3a1P08121 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC2.5□□□□□ -2.01
Col3a1P08121 Mir7232-201ENSMUST00000197929 74 ntBASIC2.5□□□□□ -2.01
Col3a1P08121 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.5□□□□□ -2.01
Col3a1P08121 Gm20144-201ENSMUST00000203031 165 ntBASIC2.5□□□□□ -2.01
Col3a1P08121 Gm44076-201ENSMUST00000203072 520 ntBASIC2.5□□□□□ -2.01
Col3a1P08121 Gm44960-201ENSMUST00000207403 141 ntBASIC2.5□□□□□ -2.01
Col3a1P08121 AC134254.5-201ENSMUST00000223436 400 ntBASIC2.5□□□□□ -2.01
Col3a1P08121 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.49□□□□□ -2.01
Col3a1P08121 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.49□□□□□ -2.01
Col3a1P08121 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Col3a1P08121 Mir19b-1-201ENSMUST00000102301 87 ntBASIC2.49□□□□□ -2.01
Col3a1P08121 Gm6897-201ENSMUST00000117714 138 ntBASIC2.49□□□□□ -2.01
Col3a1P08121 Gm15002-201ENSMUST00000118406 452 ntBASIC2.49□□□□□ -2.01
Col3a1P08121 Gm14758-201ENSMUST00000119104 138 ntBASIC2.49□□□□□ -2.01
Col3a1P08121 Gm11572-201ENSMUST00000119164 120 ntBASIC2.49□□□□□ -2.01
Col3a1P08121 Gm11693-201ENSMUST00000119625 565 ntBASIC2.49□□□□□ -2.01
Col3a1P08121 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC2.49□□□□□ -2.01
Col3a1P08121 Gm25720-201ENSMUST00000157503 105 ntBASIC2.49□□□□□ -2.01
Col3a1P08121 Gm25223-201ENSMUST00000158200 110 ntBASIC2.49□□□□□ -2.01
Col3a1P08121 Gm25836-201ENSMUST00000158918 123 ntBASIC2.49□□□□□ -2.01
Col3a1P08121 Gm25071-201ENSMUST00000175232 70 ntBASIC2.49□□□□□ -2.01
Col3a1P08121 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC2.49□□□□□ -2.01
Col3a1P08121 Gm28849-201ENSMUST00000188127 174 ntBASIC2.49□□□□□ -2.01
Col3a1P08121 Gm28330-201ENSMUST00000190353 171 ntBASIC2.49□□□□□ -2.01
Col3a1P08121 Gm37624-201ENSMUST00000193751 219 ntBASIC2.49□□□□□ -2.01
Col3a1P08121 Gm43250-201ENSMUST00000196536 273 ntBASIC2.49□□□□□ -2.01
Col3a1P08121 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC2.49□□□□□ -2.01
Col3a1P08121 AC154994.1-201ENSMUST00000217395 302 ntBASIC2.49□□□□□ -2.01
Col3a1P08121 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.49□□□□□ -2.01
Col3a1P08121 AC101945.1-201ENSMUST00000226734 466 ntBASIC2.49□□□□□ -2.01
Col3a1P08121 Gm26204-201ENSMUST00000082906 107 ntBASIC2.49□□□□□ -2.01
Col3a1P08121 Gm23650-201ENSMUST00000083355 70 ntBASIC2.49□□□□□ -2.01
Col3a1P08121 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Col3a1P08121 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.48□□□□□ -2.01
Col3a1P08121 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
Col3a1P08121 Gm23256-201ENSMUST00000102235 110 ntBASIC2.48□□□□□ -2.01
Col3a1P08121 Gm23060-201ENSMUST00000102345 109 ntBASIC2.48□□□□□ -2.01
Col3a1P08121 Gm22556-201ENSMUST00000157803 100 ntBASIC2.48□□□□□ -2.01
Col3a1P08121 Gm26195-201ENSMUST00000175035 101 ntBASIC2.48□□□□□ -2.01
Col3a1P08121 Gm23355-201ENSMUST00000177614 107 ntBASIC2.48□□□□□ -2.01
Col3a1P08121 Gm25121-201ENSMUST00000179846 79 ntBASIC2.48□□□□□ -2.01
Col3a1P08121 Gm23148-201ENSMUST00000180367 107 ntBASIC2.48□□□□□ -2.01
Col3a1P08121 Gm37162-201ENSMUST00000191708 551 ntBASIC2.48□□□□□ -2.01
Col3a1P08121 Gm37713-201ENSMUST00000191746 198 ntBASIC2.48□□□□□ -2.01
Col3a1P08121 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.48□□□□□ -2.01
Col3a1P08121 Gm37290-201ENSMUST00000195775 339 ntBASIC2.48□□□□□ -2.01
Col3a1P08121 Gm9402-201ENSMUST00000196849 388 ntBASIC2.48□□□□□ -2.01
Col3a1P08121 Gm44324-201ENSMUST00000198517 135 ntBASIC2.48□□□□□ -2.01
Col3a1P08121 Gm44922-201ENSMUST00000206690 90 ntBASIC2.48□□□□□ -2.01
Col3a1P08121 Gm45273-201ENSMUST00000211559 281 ntBASIC2.48□□□□□ -2.01
Col3a1P08121 AC159896.1-201ENSMUST00000215264 215 ntBASIC2.48□□□□□ -2.01
Col3a1P08121 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.48□□□□□ -2.01
Col3a1P08121 Gm23932-201ENSMUST00000082914 107 ntBASIC2.48□□□□□ -2.01
Col3a1P08121 Mir10a-201ENSMUST00000083585 110 ntBASIC2.48□□□□□ -2.01
Col3a1P08121 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.47□□□□□ -2.01
Col3a1P08121 Gm22496-201ENSMUST00000104493 88 ntBASIC2.47□□□□□ -2.01
Col3a1P08121 Gm24482-201ENSMUST00000117005 93 ntBASIC2.47□□□□□ -2.01
Col3a1P08121 Gm23887-201ENSMUST00000122683 172 ntBASIC2.47□□□□□ -2.01
Col3a1P08121 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.47□□□□□ -2.01
Col3a1P08121 Gm22036-201ENSMUST00000157279 215 ntBASIC2.47□□□□□ -2.01
Col3a1P08121 Gm24997-201ENSMUST00000157910 105 ntBASIC2.47□□□□□ -2.01
Col3a1P08121 Gm22766-201ENSMUST00000158372 99 ntBASIC2.47□□□□□ -2.01
Col3a1P08121 Gm25175-201ENSMUST00000178712 79 ntBASIC2.47□□□□□ -2.01
Col3a1P08121 Gm27245-201ENSMUST00000184385 376 ntBASIC2.47□□□□□ -2.01
Col3a1P08121 Mir6372-201ENSMUST00000185114 109 ntBASIC2.47□□□□□ -2.01
Col3a1P08121 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.47□□□□□ -2.01
Col3a1P08121 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Col3a1P08121 Gm5002-201ENSMUST00000207145 223 ntBASIC2.47□□□□□ -2.01
Col3a1P08121 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.47□□□□□ -2.01
Col3a1P08121 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Col3a1P08121 Gm25812-201ENSMUST00000082751 103 ntBASIC2.47□□□□□ -2.01
Col3a1P08121 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Col3a1P08121 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Col3a1P08121 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.47□□□□□ -2.01
Col3a1P08121 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.47□□□□□ -2.01
Col3a1P08121 Gm37879-201ENSMUST00000193112 1995 ntBASIC2.47□□□□□ -2.01
Col3a1P08121 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.46□□□□□ -2.01
Col3a1P08121 Gm25538-201ENSMUST00000101943 107 ntBASIC2.46□□□□□ -2.02
Col3a1P08121 Gm22784-201ENSMUST00000104088 132 ntBASIC2.46□□□□□ -2.02
Col3a1P08121 Gm23109-201ENSMUST00000116867 126 ntBASIC2.46□□□□□ -2.02
Col3a1P08121 Gm11785-201ENSMUST00000120165 601 ntBASIC2.46□□□□□ -2.02
Col3a1P08121 Gm22107-201ENSMUST00000122548 100 ntBASIC2.46□□□□□ -2.02
Col3a1P08121 Gm25321-201ENSMUST00000122558 102 ntBASIC2.46□□□□□ -2.02
Col3a1P08121 Gm24481-201ENSMUST00000157210 102 ntBASIC2.46□□□□□ -2.02
Col3a1P08121 Gm22727-201ENSMUST00000158090 116 ntBASIC2.46□□□□□ -2.02
Col3a1P08121 Mir1927-201ENSMUST00000158579 109 ntBASIC2.46□□□□□ -2.02
Col3a1P08121 Gm17052-201ENSMUST00000165496 289 ntBASIC2.46□□□□□ -2.02
Col3a1P08121 Gm24638-201ENSMUST00000179807 132 ntBASIC2.46□□□□□ -2.02
Col3a1P08121 Gm27476-201ENSMUST00000183366 104 ntBASIC2.46□□□□□ -2.02
Col3a1P08121 Gm5329-201ENSMUST00000186898 463 ntBASIC2.46□□□□□ -2.02
Col3a1P08121 Gm42623-201ENSMUST00000197225 379 ntBASIC2.46□□□□□ -2.02
Col3a1P08121 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.46□□□□□ -2.02
Col3a1P08121 CT485608.1-201ENSMUST00000228759 389 ntBASIC2.46□□□□□ -2.02
Col3a1P08121 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms