Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm25663-201ENSMUST00000157698 135 ntBASIC0.82□□□□□ -2.28
CopeO89079 Gm22654-201ENSMUST00000157874 105 ntBASIC0.82□□□□□ -2.28
CopeO89079 Gm22929-201ENSMUST00000175517 107 ntBASIC0.82□□□□□ -2.28
CopeO89079 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC0.82□□□□□ -2.28
CopeO89079 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
CopeO89079 Gm22572-201ENSMUST00000082985 105 ntBASIC0.82□□□□□ -2.28
CopeO89079 Gm25651-201ENSMUST00000083782 119 ntBASIC0.82□□□□□ -2.28
CopeO89079 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC0.82□□□□□ -2.28
CopeO89079 Mir450-2-201ENSMUST00000102444 69 ntBASIC0.81□□□□□ -2.28
CopeO89079 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC0.81□□□□□ -2.28
CopeO89079 Gm22544-201ENSMUST00000104349 127 ntBASIC0.81□□□□□ -2.28
CopeO89079 Gm15529-201ENSMUST00000121833 994 ntBASIC0.81□□□□□ -2.28
CopeO89079 Gm23535-201ENSMUST00000157542 106 ntBASIC0.81□□□□□ -2.28
CopeO89079 Gm23893-201ENSMUST00000158106 134 ntBASIC0.81□□□□□ -2.28
CopeO89079 Gm23267-201ENSMUST00000178490 132 ntBASIC0.81□□□□□ -2.28
CopeO89079 Snord116l12-201ENSMUST00000179816 94 ntBASIC0.81□□□□□ -2.28
CopeO89079 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.81□□□□□ -2.28
CopeO89079 Gm27659-201ENSMUST00000183472 98 ntBASIC0.81□□□□□ -2.28
CopeO89079 Mir691-201ENSMUST00000199719 78 ntBASIC0.81□□□□□ -2.28
CopeO89079 Gm18696-201ENSMUST00000220103 274 ntBASIC0.81□□□□□ -2.28
CopeO89079 AC156790.3-201ENSMUST00000226200 254 ntBASIC0.81□□□□□ -2.28
CopeO89079 AC133156.1-202ENSMUST00000227284 363 ntBASIC0.81□□□□□ -2.28
CopeO89079 Gm5899-201ENSMUST00000071770 270 ntBASIC0.81□□□□□ -2.28
CopeO89079 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
CopeO89079 Mir743b-201ENSMUST00000104751 77 ntBASIC0.8□□□□□ -2.28
CopeO89079 Gm16242-201ENSMUST00000117741 334 ntBASIC0.8□□□□□ -2.28
CopeO89079 Gm22328-201ENSMUST00000158074 112 ntBASIC0.8□□□□□ -2.28
CopeO89079 Gm27510-201ENSMUST00000158214 64 ntBASIC0.8□□□□□ -2.28
CopeO89079 Gm24942-201ENSMUST00000158328 114 ntBASIC0.8□□□□□ -2.28
CopeO89079 Zfp950-206ENSMUST00000178819 171 ntBASIC0.8□□□□□ -2.28
CopeO89079 Gm27624-201ENSMUST00000185047 177 ntBASIC0.8□□□□□ -2.28
CopeO89079 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC0.8□□□□□ -2.28
CopeO89079 Mir7118-201ENSMUST00000197760 61 ntBASIC0.8□□□□□ -2.28
CopeO89079 Mir3087-201ENSMUST00000199405 56 ntBASIC0.8□□□□□ -2.28
CopeO89079 AC124346.1-201ENSMUST00000218539 364 ntBASIC0.8□□□□□ -2.28
CopeO89079 Gm20102-201ENSMUST00000222445 220 ntBASIC0.8□□□□□ -2.28
CopeO89079 CT025689.4-201ENSMUST00000225926 601 ntBASIC0.8□□□□□ -2.28
CopeO89079 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.8□□□□□ -2.28
CopeO89079 Snord35a-201ENSMUST00000083884 90 ntBASIC0.8□□□□□ -2.28
CopeO89079 Gm22591-201ENSMUST00000104243 106 ntBASIC0.79□□□□□ -2.28
CopeO89079 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC0.79□□□□□ -2.28
CopeO89079 Gm20630-201ENSMUST00000177387 551 ntBASIC0.79□□□□□ -2.28
CopeO89079 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC0.79□□□□□ -2.28
CopeO89079 Gm42834-201ENSMUST00000196845 256 ntBASIC0.79□□□□□ -2.28
CopeO89079 Gm44446-201ENSMUST00000204864 255 ntBASIC0.79□□□□□ -2.28
CopeO89079 AC159297.2-201ENSMUST00000219567 1075 ntBASIC0.79□□□□□ -2.28
CopeO89079 AC159885.1-201ENSMUST00000222221 199 ntBASIC0.79□□□□□ -2.28
CopeO89079 Gm23735-201ENSMUST00000082551 134 ntBASIC0.79□□□□□ -2.28
CopeO89079 Gm26457-201ENSMUST00000082678 78 ntBASIC0.79□□□□□ -2.28
CopeO89079 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.78□□□□□ -2.28
CopeO89079 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
CopeO89079 Gm24338-201ENSMUST00000104205 127 ntBASIC0.78□□□□□ -2.28
CopeO89079 Gm9059-201ENSMUST00000118319 183 ntBASIC0.78□□□□□ -2.28
CopeO89079 Gm22477-201ENSMUST00000122569 316 ntBASIC0.78□□□□□ -2.28
CopeO89079 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CopeO89079 Gm22551-201ENSMUST00000157795 103 ntBASIC0.78□□□□□ -2.28
CopeO89079 Gm22733-201ENSMUST00000158094 91 ntBASIC0.78□□□□□ -2.28
CopeO89079 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC0.78□□□□□ -2.28
CopeO89079 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
CopeO89079 Gm21894-201ENSMUST00000179631 546 ntBASIC0.78□□□□□ -2.28
CopeO89079 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
CopeO89079 Gm27974-201ENSMUST00000183415 105 ntBASIC0.78□□□□□ -2.28
CopeO89079 Gm27326-201ENSMUST00000183504 95 ntBASIC0.78□□□□□ -2.28
CopeO89079 Trbv22-201ENSMUST00000191697 291 ntBASIC0.78□□□□□ -2.28
CopeO89079 Gm38323-201ENSMUST00000192450 210 ntBASIC0.78□□□□□ -2.28
CopeO89079 Gm44301-201ENSMUST00000200362 143 ntBASIC0.78□□□□□ -2.28
CopeO89079 Gm44449-201ENSMUST00000203610 153 ntBASIC0.78□□□□□ -2.28
CopeO89079 Gm19855-201ENSMUST00000210145 249 ntBASIC0.78□□□□□ -2.28
CopeO89079 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC0.78□□□□□ -2.28
CopeO89079 AC192616.3-201ENSMUST00000220797 1124 ntBASIC0.78□□□□□ -2.28
CopeO89079 AC124772.1-201ENSMUST00000221325 151 ntBASIC0.78□□□□□ -2.28
CopeO89079 AC163646.2-201ENSMUST00000227962 141 ntBASIC0.78□□□□□ -2.28
CopeO89079 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
CopeO89079 Mir27b-201ENSMUST00000083541 73 ntBASIC0.78□□□□□ -2.28
CopeO89079 Gm25896-201ENSMUST00000083713 136 ntBASIC0.78□□□□□ -2.28
CopeO89079 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
CopeO89079 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.77□□□□□ -2.29
CopeO89079 Gm25377-201ENSMUST00000104334 129 ntBASIC0.77□□□□□ -2.29
CopeO89079 Gm13457-201ENSMUST00000117885 267 ntBASIC0.77□□□□□ -2.29
CopeO89079 Gm13153-201ENSMUST00000120969 637 ntBASIC0.77□□□□□ -2.29
CopeO89079 Gm23111-201ENSMUST00000122652 105 ntBASIC0.77□□□□□ -2.29
CopeO89079 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.77□□□□□ -2.29
CopeO89079 Gm25054-201ENSMUST00000157370 97 ntBASIC0.77□□□□□ -2.29
CopeO89079 Gm25413-201ENSMUST00000158544 312 ntBASIC0.77□□□□□ -2.29
CopeO89079 Gm2962-201ENSMUST00000159266 336 ntBASIC0.77□□□□□ -2.29
CopeO89079 Gm23967-201ENSMUST00000175062 78 ntBASIC0.77□□□□□ -2.29
CopeO89079 Mir3061-201ENSMUST00000175129 91 ntBASIC0.77□□□□□ -2.29
CopeO89079 Gm23419-201ENSMUST00000175523 84 ntBASIC0.77□□□□□ -2.29
CopeO89079 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CopeO89079 Gm29350-201ENSMUST00000189141 541 ntBASIC0.77□□□□□ -2.29
CopeO89079 Gm44320-201ENSMUST00000199276 86 ntBASIC0.77□□□□□ -2.29
CopeO89079 Gm43993-201ENSMUST00000203972 247 ntBASIC0.77□□□□□ -2.29
CopeO89079 AC153968.2-201ENSMUST00000215579 1140 ntBASIC0.77□□□□□ -2.29
CopeO89079 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.77□□□□□ -2.29
CopeO89079 Mir293-201ENSMUST00000104841 80 ntBASIC0.76□□□□□ -2.29
CopeO89079 Gm11891-201ENSMUST00000121241 619 ntBASIC0.76□□□□□ -2.29
CopeO89079 Gm23106-201ENSMUST00000157554 101 ntBASIC0.76□□□□□ -2.29
CopeO89079 Gm24726-201ENSMUST00000158232 121 ntBASIC0.76□□□□□ -2.29
CopeO89079 Gm17052-201ENSMUST00000165496 289 ntBASIC0.76□□□□□ -2.29
CopeO89079 Gm24510-201ENSMUST00000174965 94 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms