Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Gm26495-201ENSMUST00000083152 137 ntBASIC2.3□□□□□ -2.04
DffbO54788 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.3□□□□□ -2.04
DffbO54788 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
DffbO54788 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
DffbO54788 Gm22193-201ENSMUST00000116868 76 ntBASIC2.29□□□□□ -2.04
DffbO54788 Gm24392-201ENSMUST00000158136 103 ntBASIC2.29□□□□□ -2.04
DffbO54788 Gm25373-201ENSMUST00000158156 115 ntBASIC2.29□□□□□ -2.04
DffbO54788 Gm24667-201ENSMUST00000158938 103 ntBASIC2.29□□□□□ -2.04
DffbO54788 Mir28b-201ENSMUST00000175399 80 ntBASIC2.29□□□□□ -2.04
DffbO54788 Mir1291-201ENSMUST00000199842 117 ntBASIC2.29□□□□□ -2.04
DffbO54788 Gm45879-201ENSMUST00000212521 392 ntBASIC2.29□□□□□ -2.04
DffbO54788 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.29□□□□□ -2.04
DffbO54788 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.29□□□□□ -2.04
DffbO54788 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.29□□□□□ -2.04
DffbO54788 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.29□□□□□ -2.04
DffbO54788 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.29□□□□□ -2.04
DffbO54788 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.29□□□□□ -2.04
DffbO54788 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.29□□□□□ -2.04
DffbO54788 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.29□□□□□ -2.04
DffbO54788 Gm24966-201ENSMUST00000082443 79 ntBASIC2.29□□□□□ -2.04
DffbO54788 Gm23249-201ENSMUST00000083369 161 ntBASIC2.29□□□□□ -2.04
DffbO54788 Snora34-201ENSMUST00000083402 138 ntBASIC2.29□□□□□ -2.04
DffbO54788 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
DffbO54788 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
DffbO54788 Gm24280-201ENSMUST00000104237 134 ntBASIC2.28□□□□□ -2.04
DffbO54788 Gm23836-201ENSMUST00000104434 129 ntBASIC2.28□□□□□ -2.04
DffbO54788 Gm25539-201ENSMUST00000116886 122 ntBASIC2.28□□□□□ -2.04
DffbO54788 Gm11786-201ENSMUST00000120799 155 ntBASIC2.28□□□□□ -2.04
DffbO54788 Gm24896-201ENSMUST00000122741 135 ntBASIC2.28□□□□□ -2.04
DffbO54788 n-R5s87-201ENSMUST00000122752 116 ntBASIC2.28□□□□□ -2.04
DffbO54788 Gm24436-201ENSMUST00000157889 302 ntBASIC2.28□□□□□ -2.04
DffbO54788 Mir1936-201ENSMUST00000158699 93 ntBASIC2.28□□□□□ -2.04
DffbO54788 Gm27786-201ENSMUST00000184337 70 ntBASIC2.28□□□□□ -2.04
DffbO54788 Gm28627-201ENSMUST00000186141 453 ntBASIC2.28□□□□□ -2.04
DffbO54788 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
DffbO54788 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.28□□□□□ -2.04
DffbO54788 Snord104-201ENSMUST00000083192 70 ntBASIC2.28□□□□□ -2.04
DffbO54788 Gm25410-201ENSMUST00000083758 137 ntBASIC2.28□□□□□ -2.04
DffbO54788 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
DffbO54788 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
DffbO54788 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
DffbO54788 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.27□□□□□ -2.05
DffbO54788 Gm25500-201ENSMUST00000104426 123 ntBASIC2.27□□□□□ -2.05
DffbO54788 Gm25115-201ENSMUST00000157187 140 ntBASIC2.27□□□□□ -2.05
DffbO54788 Gm23380-201ENSMUST00000158448 103 ntBASIC2.27□□□□□ -2.05
DffbO54788 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
DffbO54788 Gm24415-201ENSMUST00000180218 107 ntBASIC2.27□□□□□ -2.05
DffbO54788 Gm23190-201ENSMUST00000180307 64 ntBASIC2.27□□□□□ -2.05
DffbO54788 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
DffbO54788 Gm32175-201ENSMUST00000193641 346 ntBASIC2.27□□□□□ -2.05
DffbO54788 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.27□□□□□ -2.05
DffbO54788 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.27□□□□□ -2.05
DffbO54788 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC2.27□□□□□ -2.05
DffbO54788 Gm44555-201ENSMUST00000209008 148 ntBASIC2.27□□□□□ -2.05
DffbO54788 Gm45522-201ENSMUST00000210784 166 ntBASIC2.27□□□□□ -2.05
DffbO54788 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.27□□□□□ -2.05
DffbO54788 Gm23246-201ENSMUST00000083371 67 ntBASIC2.27□□□□□ -2.05
DffbO54788 Mir181b-2-201ENSMUST00000083644 89 ntBASIC2.27□□□□□ -2.05
DffbO54788 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.27□□□□□ -2.05
DffbO54788 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.27□□□□□ -2.05
DffbO54788 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
DffbO54788 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
DffbO54788 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
DffbO54788 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
DffbO54788 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
DffbO54788 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.26□□□□□ -2.05
DffbO54788 Gm23033-201ENSMUST00000157996 134 ntBASIC2.26□□□□□ -2.05
DffbO54788 Gm24879-201ENSMUST00000158386 143 ntBASIC2.26□□□□□ -2.05
DffbO54788 Gm19123-201ENSMUST00000190716 651 ntBASIC2.26□□□□□ -2.05
DffbO54788 Gm42834-201ENSMUST00000196845 256 ntBASIC2.26□□□□□ -2.05
DffbO54788 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.26□□□□□ -2.05
DffbO54788 Gm18991-201ENSMUST00000209225 746 ntBASIC2.26□□□□□ -2.05
DffbO54788 Gm45344-201ENSMUST00000211610 341 ntBASIC2.26□□□□□ -2.05
DffbO54788 AC159896.1-201ENSMUST00000215264 215 ntBASIC2.26□□□□□ -2.05
DffbO54788 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
DffbO54788 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.26□□□□□ -2.05
DffbO54788 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.25□□□□□ -2.05
DffbO54788 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.25□□□□□ -2.05
DffbO54788 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
DffbO54788 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.25□□□□□ -2.05
DffbO54788 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
DffbO54788 Gm25316-201ENSMUST00000116826 118 ntBASIC2.25□□□□□ -2.05
DffbO54788 Gm23841-201ENSMUST00000116951 114 ntBASIC2.25□□□□□ -2.05
DffbO54788 Gm25720-201ENSMUST00000157503 105 ntBASIC2.25□□□□□ -2.05
DffbO54788 Gm24006-201ENSMUST00000158462 132 ntBASIC2.25□□□□□ -2.05
DffbO54788 Gm26215-201ENSMUST00000158584 139 ntBASIC2.25□□□□□ -2.05
DffbO54788 Gm25253-201ENSMUST00000179958 107 ntBASIC2.25□□□□□ -2.05
DffbO54788 Mir7242-201ENSMUST00000183710 79 ntBASIC2.25□□□□□ -2.05
DffbO54788 Mir7081-201ENSMUST00000184490 75 ntBASIC2.25□□□□□ -2.05
DffbO54788 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.25□□□□□ -2.05
DffbO54788 Gm24350-202ENSMUST00000198309 132 ntBASIC2.25□□□□□ -2.05
DffbO54788 Gm44666-201ENSMUST00000208544 391 ntBASIC2.25□□□□□ -2.05
DffbO54788 Gm19118-201ENSMUST00000222554 98 ntBASIC2.25□□□□□ -2.05
DffbO54788 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.25□□□□□ -2.05
DffbO54788 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
DffbO54788 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.25□□□□□ -2.05
DffbO54788 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
DffbO54788 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.24□□□□□ -2.05
DffbO54788 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
DffbO54788 Snora36b-201ENSMUST00000104383 132 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms