Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm28120-201ENSMUST00000188812 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm28369-201ENSMUST00000188993 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm28537-201ENSMUST00000189026 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm28861-201ENSMUST00000189681 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm28717-201ENSMUST00000189950 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm29180-201ENSMUST00000190003 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm29575-201ENSMUST00000190597 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm29631-201ENSMUST00000191065 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm28160-201ENSMUST00000191229 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm29469-201ENSMUST00000191448 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm37658-201ENSMUST00000192672 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm38213-201ENSMUST00000193203 173 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm37129-201ENSMUST00000195791 315 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm42855-201ENSMUST00000197388 253 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm43898-201ENSMUST00000204456 424 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.57□□□□□ -2.32
Sdc4O35988 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm10264-201ENSMUST00000220589 429 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 AC124569.4-201ENSMUST00000223830 1220 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm26224-201ENSMUST00000082506 80 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm25475-201ENSMUST00000082825 180 ntBASIC0.57□□□□□ -2.32
Sdc4O35988 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.56□□□□□ -2.32
Sdc4O35988 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
Sdc4O35988 Gm25496-201ENSMUST00000104430 120 ntBASIC0.56□□□□□ -2.32
Sdc4O35988 Gm23321-201ENSMUST00000104465 126 ntBASIC0.56□□□□□ -2.32
Sdc4O35988 Gm12102-201ENSMUST00000118251 604 ntBASIC0.56□□□□□ -2.32
Sdc4O35988 Gm6829-201ENSMUST00000119858 360 ntBASIC0.56□□□□□ -2.32
Sdc4O35988 Gm13153-201ENSMUST00000120969 637 ntBASIC0.56□□□□□ -2.32
Sdc4O35988 Gm23535-201ENSMUST00000157542 106 ntBASIC0.56□□□□□ -2.32
Sdc4O35988 Gm23120-201ENSMUST00000157654 287 ntBASIC0.56□□□□□ -2.32
Sdc4O35988 Gm25956-201ENSMUST00000175115 217 ntBASIC0.56□□□□□ -2.32
Sdc4O35988 Gm21815-201ENSMUST00000178213 664 ntBASIC0.56□□□□□ -2.32
Sdc4O35988 Gm20874-201ENSMUST00000178356 663 ntBASIC0.56□□□□□ -2.32
Sdc4O35988 Gm24306-201ENSMUST00000180229 79 ntBASIC0.56□□□□□ -2.32
Sdc4O35988 Gm24518-201ENSMUST00000180275 94 ntBASIC0.56□□□□□ -2.32
Sdc4O35988 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.56□□□□□ -2.32
Sdc4O35988 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.56□□□□□ -2.32
Sdc4O35988 Gm26228-201ENSMUST00000082512 107 ntBASIC0.56□□□□□ -2.32
Sdc4O35988 Gm25080-201ENSMUST00000082526 107 ntBASIC0.56□□□□□ -2.32
Sdc4O35988 Snora34-201ENSMUST00000083402 138 ntBASIC0.56□□□□□ -2.32
Sdc4O35988 Mir216a-201ENSMUST00000083605 72 ntBASIC0.56□□□□□ -2.32
Sdc4O35988 Gm24258-201ENSMUST00000083739 133 ntBASIC0.56□□□□□ -2.32
Sdc4O35988 Gm25518-201ENSMUST00000083864 107 ntBASIC0.56□□□□□ -2.32
Sdc4O35988 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Sdc4O35988 Gm12106-201ENSMUST00000116006 1200 ntBASIC0.55□□□□□ -2.32
Sdc4O35988 Gm23605-201ENSMUST00000157255 127 ntBASIC0.55□□□□□ -2.32
Sdc4O35988 Gm24747-201ENSMUST00000157835 87 ntBASIC0.55□□□□□ -2.32
Sdc4O35988 Gm25371-201ENSMUST00000158162 101 ntBASIC0.55□□□□□ -2.32
Sdc4O35988 Gm23619-201ENSMUST00000178411 94 ntBASIC0.55□□□□□ -2.32
Sdc4O35988 Gm25474-201ENSMUST00000179052 94 ntBASIC0.55□□□□□ -2.32
Sdc4O35988 Gm22047-201ENSMUST00000179176 94 ntBASIC0.55□□□□□ -2.32
Sdc4O35988 Gm22263-201ENSMUST00000180060 104 ntBASIC0.55□□□□□ -2.32
Sdc4O35988 Gm23144-201ENSMUST00000180226 107 ntBASIC0.55□□□□□ -2.32
Sdc4O35988 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC0.55□□□□□ -2.32
Sdc4O35988 Gm19901-201ENSMUST00000192191 495 ntBASIC0.55□□□□□ -2.32
Sdc4O35988 Gm38333-201ENSMUST00000193608 604 ntBASIC0.55□□□□□ -2.32
Sdc4O35988 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC0.55□□□□□ -2.32
Sdc4O35988 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.55□□□□□ -2.32
Sdc4O35988 Gm13804-201ENSMUST00000119552 172 ntBASIC0.54□□□□□ -2.32
Sdc4O35988 Gm23390-201ENSMUST00000157393 106 ntBASIC0.54□□□□□ -2.32
Sdc4O35988 Gm25706-201ENSMUST00000157828 247 ntBASIC0.54□□□□□ -2.32
Sdc4O35988 Gm16588-201ENSMUST00000162889 355 ntBASIC0.54□□□□□ -2.32
Sdc4O35988 Mir3061-201ENSMUST00000175129 91 ntBASIC0.54□□□□□ -2.32
Sdc4O35988 Gm26285-201ENSMUST00000177923 107 ntBASIC0.54□□□□□ -2.32
Sdc4O35988 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
Sdc4O35988 Gm37997-201ENSMUST00000193515 267 ntBASIC0.54□□□□□ -2.32
Sdc4O35988 Mir703-201ENSMUST00000197105 109 ntBASIC0.54□□□□□ -2.32
Sdc4O35988 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.54□□□□□ -2.32
Sdc4O35988 Gm7495-201ENSMUST00000215099 426 ntBASIC0.54□□□□□ -2.32
Sdc4O35988 Gm20102-201ENSMUST00000222445 220 ntBASIC0.54□□□□□ -2.32
Sdc4O35988 Gm23622-201ENSMUST00000082460 107 ntBASIC0.54□□□□□ -2.32
Sdc4O35988 Gm24430-201ENSMUST00000104077 104 ntBASIC0.53□□□□□ -2.32
Sdc4O35988 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.53□□□□□ -2.32
Sdc4O35988 Gm25784-201ENSMUST00000122524 81 ntBASIC0.53□□□□□ -2.32
Sdc4O35988 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.53□□□□□ -2.32
Sdc4O35988 Gm24862-201ENSMUST00000179103 79 ntBASIC0.53□□□□□ -2.32
Sdc4O35988 Gm23310-201ENSMUST00000179105 79 ntBASIC0.53□□□□□ -2.32
Sdc4O35988 Gm25461-201ENSMUST00000179293 79 ntBASIC0.53□□□□□ -2.32
Sdc4O35988 Gm29661-201ENSMUST00000186781 315 ntBASIC0.53□□□□□ -2.32
Sdc4O35988 Gm29308-201ENSMUST00000188863 315 ntBASIC0.53□□□□□ -2.32
Sdc4O35988 Gm34073-201ENSMUST00000195736 212 ntBASIC0.53□□□□□ -2.32
Sdc4O35988 Gm43556-201ENSMUST00000196186 681 ntBASIC0.53□□□□□ -2.32
Sdc4O35988 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.53□□□□□ -2.32
Sdc4O35988 Gm18696-201ENSMUST00000220103 274 ntBASIC0.53□□□□□ -2.32
Sdc4O35988 Gm25851-201ENSMUST00000082794 107 ntBASIC0.53□□□□□ -2.32
Sdc4O35988 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
Sdc4O35988 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.33
Sdc4O35988 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.52□□□□□ -2.33
Sdc4O35988 Gm13475-201ENSMUST00000119290 234 ntBASIC0.52□□□□□ -2.33
Sdc4O35988 Gm13396-201ENSMUST00000120617 271 ntBASIC0.52□□□□□ -2.33
Sdc4O35988 Gm11792-201ENSMUST00000120640 168 ntBASIC0.52□□□□□ -2.33
Sdc4O35988 Gm11358-201ENSMUST00000122310 373 ntBASIC0.52□□□□□ -2.33
Sdc4O35988 Gm25413-201ENSMUST00000158544 312 ntBASIC0.52□□□□□ -2.33
Sdc4O35988 Gm23777-201ENSMUST00000158994 259 ntBASIC0.52□□□□□ -2.33
Sdc4O35988 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.52□□□□□ -2.33
Sdc4O35988 Gm16404-201ENSMUST00000177739 468 ntBASIC0.52□□□□□ -2.33
Sdc4O35988 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.52□□□□□ -2.33
Sdc4O35988 Gm7958-201ENSMUST00000178255 468 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms