Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Gm22264-201ENSMUST00000178200 107 ntBASIC1.8□□□□□ -2.12
Clk4O35493 Gm25933-201ENSMUST00000178943 108 ntBASIC1.8□□□□□ -2.12
Clk4O35493 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.8□□□□□ -2.12
Clk4O35493 Gm29490-201ENSMUST00000190923 342 ntBASIC1.8□□□□□ -2.12
Clk4O35493 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.8□□□□□ -2.12
Clk4O35493 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.8□□□□□ -2.12
Clk4O35493 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.8□□□□□ -2.12
Clk4O35493 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.8□□□□□ -2.12
Clk4O35493 Gm26126-201ENSMUST00000083188 164 ntBASIC1.8□□□□□ -2.12
Clk4O35493 Gm23462-201ENSMUST00000083264 104 ntBASIC1.8□□□□□ -2.12
Clk4O35493 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.8□□□□□ -2.12
Clk4O35493 CT030170.3-201ENSMUST00000221205 1815 ntBASIC1.8□□□□□ -2.12
Clk4O35493 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.79□□□□□ -2.12
Clk4O35493 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC1.79□□□□□ -2.12
Clk4O35493 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.79□□□□□ -2.12
Clk4O35493 Gm17161-201ENSMUST00000169187 524 ntBASIC1.79□□□□□ -2.12
Clk4O35493 Gm24618-201ENSMUST00000177718 94 ntBASIC1.79□□□□□ -2.12
Clk4O35493 Gm24487-201ENSMUST00000178017 63 ntBASIC1.79□□□□□ -2.12
Clk4O35493 Gm23953-201ENSMUST00000178214 94 ntBASIC1.79□□□□□ -2.12
Clk4O35493 Gm26332-201ENSMUST00000179813 94 ntBASIC1.79□□□□□ -2.12
Clk4O35493 Gm22863-201ENSMUST00000180265 94 ntBASIC1.79□□□□□ -2.12
Clk4O35493 Gm44666-201ENSMUST00000208544 391 ntBASIC1.79□□□□□ -2.12
Clk4O35493 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.79□□□□□ -2.12
Clk4O35493 Gm23406-201ENSMUST00000082537 122 ntBASIC1.79□□□□□ -2.12
Clk4O35493 Gm24316-201ENSMUST00000083041 107 ntBASIC1.79□□□□□ -2.12
Clk4O35493 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Clk4O35493 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Clk4O35493 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.78□□□□□ -2.12
Clk4O35493 Gm23579-201ENSMUST00000158528 103 ntBASIC1.78□□□□□ -2.12
Clk4O35493 Gm22308-201ENSMUST00000177609 107 ntBASIC1.78□□□□□ -2.12
Clk4O35493 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.78□□□□□ -2.12
Clk4O35493 Mir6379-201ENSMUST00000183392 115 ntBASIC1.78□□□□□ -2.12
Clk4O35493 Gm27722-201ENSMUST00000183908 76 ntBASIC1.78□□□□□ -2.12
Clk4O35493 Mir7678-201ENSMUST00000185076 71 ntBASIC1.78□□□□□ -2.12
Clk4O35493 Gm32175-201ENSMUST00000193641 346 ntBASIC1.78□□□□□ -2.12
Clk4O35493 Gm43512-201ENSMUST00000198495 176 ntBASIC1.78□□□□□ -2.12
Clk4O35493 Mir3970-201ENSMUST00000199287 90 ntBASIC1.78□□□□□ -2.12
Clk4O35493 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.78□□□□□ -2.12
Clk4O35493 Gm2829-201ENSMUST00000213121 499 ntBASIC1.78□□□□□ -2.12
Clk4O35493 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.78□□□□□ -2.12
Clk4O35493 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.78□□□□□ -2.12
Clk4O35493 Gm22997-201ENSMUST00000082845 107 ntBASIC1.78□□□□□ -2.12
Clk4O35493 Gm23412-201ENSMUST00000083017 107 ntBASIC1.78□□□□□ -2.12
Clk4O35493 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.77□□□□□ -2.13
Clk4O35493 Gm13672-201ENSMUST00000117554 459 ntBASIC1.77□□□□□ -2.13
Clk4O35493 Gm14001-201ENSMUST00000118847 247 ntBASIC1.77□□□□□ -2.13
Clk4O35493 Gm5396-201ENSMUST00000121222 532 ntBASIC1.77□□□□□ -2.13
Clk4O35493 Gm23120-201ENSMUST00000157654 287 ntBASIC1.77□□□□□ -2.13
Clk4O35493 Gm25384-201ENSMUST00000157807 105 ntBASIC1.77□□□□□ -2.13
Clk4O35493 Gm24225-201ENSMUST00000158825 98 ntBASIC1.77□□□□□ -2.13
Clk4O35493 Gm22114-201ENSMUST00000177756 107 ntBASIC1.77□□□□□ -2.13
Clk4O35493 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.77□□□□□ -2.13
Clk4O35493 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.77□□□□□ -2.13
Clk4O35493 Mir6997-201ENSMUST00000184313 71 ntBASIC1.77□□□□□ -2.13
Clk4O35493 Gm27979-201ENSMUST00000185126 56 ntBASIC1.77□□□□□ -2.13
Clk4O35493 Gm29397-201ENSMUST00000185205 333 ntBASIC1.77□□□□□ -2.13
Clk4O35493 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
Clk4O35493 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Clk4O35493 Gm43676-201ENSMUST00000197532 540 ntBASIC1.77□□□□□ -2.13
Clk4O35493 Snord43-201ENSMUST00000199549 108 ntBASIC1.77□□□□□ -2.13
Clk4O35493 Gm44858-201ENSMUST00000207360 154 ntBASIC1.77□□□□□ -2.13
Clk4O35493 Gm45365-201ENSMUST00000209489 256 ntBASIC1.77□□□□□ -2.13
Clk4O35493 Gm45616-201ENSMUST00000211711 319 ntBASIC1.77□□□□□ -2.13
Clk4O35493 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.77□□□□□ -2.13
Clk4O35493 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.77□□□□□ -2.13
Clk4O35493 AC166341.3-201ENSMUST00000221861 114 ntBASIC1.77□□□□□ -2.13
Clk4O35493 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.77□□□□□ -2.13
Clk4O35493 Gm22685-201ENSMUST00000082848 106 ntBASIC1.77□□□□□ -2.13
Clk4O35493 Gm23453-201ENSMUST00000083326 106 ntBASIC1.77□□□□□ -2.13
Clk4O35493 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.76□□□□□ -2.13
Clk4O35493 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Clk4O35493 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Clk4O35493 Mir701-201ENSMUST00000102208 109 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Gm25090-201ENSMUST00000104000 132 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Gm15010-201ENSMUST00000117153 407 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Gm15365-201ENSMUST00000122392 300 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Mir1898-201ENSMUST00000122643 83 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Gm23589-201ENSMUST00000157660 105 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Gm22654-201ENSMUST00000157874 105 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Gm23262-201ENSMUST00000158323 168 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Mir6346-201ENSMUST00000183982 81 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Gm20923-201ENSMUST00000190009 319 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Gm21088-201ENSMUST00000190875 316 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Mir7661-201ENSMUST00000197023 61 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Gm43583-201ENSMUST00000199235 303 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Gm45207-201ENSMUST00000207469 145 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Gm40810-201ENSMUST00000219149 253 ntBASIC1.76□□□□□ -2.13
Clk4O35493 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Gm26922-201ENSMUST00000082687 72 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Mir107-201ENSMUST00000083660 87 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Gm26314-201ENSMUST00000083891 107 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Gm26107-201ENSMUST00000083972 107 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.76□□□□□ -2.13
Clk4O35493 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.76□□□□□ -2.13
Clk4O35493 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Clk4O35493 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
Clk4O35493 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms