Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.37□□□□□ -2.03
Shisa8J3QNX5 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Shisa8J3QNX5 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Shisa8J3QNX5 Gm23747-201ENSMUST00000104228 131 ntBASIC2.36□□□□□ -2.03
Shisa8J3QNX5 Gm12512-201ENSMUST00000119620 217 ntBASIC2.36□□□□□ -2.03
Shisa8J3QNX5 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Shisa8J3QNX5 Gm23980-201ENSMUST00000157135 158 ntBASIC2.36□□□□□ -2.03
Shisa8J3QNX5 Gm23535-201ENSMUST00000157542 106 ntBASIC2.36□□□□□ -2.03
Shisa8J3QNX5 Gm24879-201ENSMUST00000158386 143 ntBASIC2.36□□□□□ -2.03
Shisa8J3QNX5 Gm5224-201ENSMUST00000183060 350 ntBASIC2.36□□□□□ -2.03
Shisa8J3QNX5 Gm27271-201ENSMUST00000183509 170 ntBASIC2.36□□□□□ -2.03
Shisa8J3QNX5 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.36□□□□□ -2.03
Shisa8J3QNX5 Gm43563-201ENSMUST00000196761 198 ntBASIC2.36□□□□□ -2.03
Shisa8J3QNX5 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.36□□□□□ -2.03
Shisa8J3QNX5 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.36□□□□□ -2.03
Shisa8J3QNX5 Gm36189-201ENSMUST00000204113 523 ntBASIC2.36□□□□□ -2.03
Shisa8J3QNX5 Gm18346-201ENSMUST00000216782 325 ntBASIC2.36□□□□□ -2.03
Shisa8J3QNX5 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.36□□□□□ -2.03
Shisa8J3QNX5 AC154213.2-201ENSMUST00000227138 187 ntBASIC2.36□□□□□ -2.03
Shisa8J3QNX5 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Shisa8J3QNX5 Gm23723-201ENSMUST00000082996 132 ntBASIC2.36□□□□□ -2.03
Shisa8J3QNX5 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Shisa8J3QNX5 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Shisa8J3QNX5 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Shisa8J3QNX5 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Shisa8J3QNX5 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Shisa8J3QNX5 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.35□□□□□ -2.03
Shisa8J3QNX5 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Shisa8J3QNX5 Gm22939-201ENSMUST00000103958 131 ntBASIC2.35□□□□□ -2.03
Shisa8J3QNX5 Snord19-201ENSMUST00000104609 76 ntBASIC2.35□□□□□ -2.03
Shisa8J3QNX5 Gm23600-201ENSMUST00000157260 71 ntBASIC2.35□□□□□ -2.03
Shisa8J3QNX5 Gm23476-201ENSMUST00000158881 274 ntBASIC2.35□□□□□ -2.03
Shisa8J3QNX5 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2.35□□□□□ -2.03
Shisa8J3QNX5 Mir6402-201ENSMUST00000183406 80 ntBASIC2.35□□□□□ -2.03
Shisa8J3QNX5 Mir7242-201ENSMUST00000183710 79 ntBASIC2.35□□□□□ -2.03
Shisa8J3QNX5 Gm44385-201ENSMUST00000198781 81 ntBASIC2.35□□□□□ -2.03
Shisa8J3QNX5 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.35□□□□□ -2.03
Shisa8J3QNX5 Gm44429-201ENSMUST00000203542 186 ntBASIC2.35□□□□□ -2.03
Shisa8J3QNX5 Gm44563-201ENSMUST00000207958 178 ntBASIC2.35□□□□□ -2.03
Shisa8J3QNX5 Gm18991-201ENSMUST00000209225 746 ntBASIC2.35□□□□□ -2.03
Shisa8J3QNX5 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2.35□□□□□ -2.03
Shisa8J3QNX5 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.35□□□□□ -2.03
Shisa8J3QNX5 Gm23040-201ENSMUST00000083869 163 ntBASIC2.35□□□□□ -2.03
Shisa8J3QNX5 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.35□□□□□ -2.03
Shisa8J3QNX5 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.35□□□□□ -2.03
Shisa8J3QNX5 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Shisa8J3QNX5 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Shisa8J3QNX5 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Shisa8J3QNX5 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Shisa8J3QNX5 Gm25280-201ENSMUST00000157269 101 ntBASIC2.34□□□□□ -2.03
Shisa8J3QNX5 Gm24787-201ENSMUST00000157380 123 ntBASIC2.34□□□□□ -2.03
Shisa8J3QNX5 Gm24138-201ENSMUST00000157572 114 ntBASIC2.34□□□□□ -2.03
Shisa8J3QNX5 Gm25914-201ENSMUST00000157618 153 ntBASIC2.34□□□□□ -2.03
Shisa8J3QNX5 Gm23589-201ENSMUST00000157660 105 ntBASIC2.34□□□□□ -2.03
Shisa8J3QNX5 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Shisa8J3QNX5 Gm27470-201ENSMUST00000184070 210 ntBASIC2.34□□□□□ -2.03
Shisa8J3QNX5 Gm43220-201ENSMUST00000199299 282 ntBASIC2.34□□□□□ -2.03
Shisa8J3QNX5 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.34□□□□□ -2.03
Shisa8J3QNX5 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.34□□□□□ -2.03
Shisa8J3QNX5 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.34□□□□□ -2.03
Shisa8J3QNX5 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.34□□□□□ -2.03
Shisa8J3QNX5 Gm9174-201ENSMUST00000078149 255 ntBASIC2.34□□□□□ -2.03
Shisa8J3QNX5 Gm22704-201ENSMUST00000083027 137 ntBASIC2.34□□□□□ -2.03
Shisa8J3QNX5 Snord104-201ENSMUST00000083192 70 ntBASIC2.34□□□□□ -2.03
Shisa8J3QNX5 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.34□□□□□ -2.04
Shisa8J3QNX5 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Shisa8J3QNX5 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Shisa8J3QNX5 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.33□□□□□ -2.04
Shisa8J3QNX5 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Shisa8J3QNX5 Gm13443-201ENSMUST00000120770 555 ntBASIC2.33□□□□□ -2.04
Shisa8J3QNX5 Gm12155-201ENSMUST00000121267 160 ntBASIC2.33□□□□□ -2.04
Shisa8J3QNX5 Gm24440-201ENSMUST00000157236 63 ntBASIC2.33□□□□□ -2.04
Shisa8J3QNX5 Gm22141-201ENSMUST00000157403 277 ntBASIC2.33□□□□□ -2.04
Shisa8J3QNX5 Gm17528-201ENSMUST00000171026 239 ntBASIC2.33□□□□□ -2.04
Shisa8J3QNX5 Gm24512-201ENSMUST00000174963 65 ntBASIC2.33□□□□□ -2.04
Shisa8J3QNX5 Gm44352-201ENSMUST00000196358 110 ntBASIC2.33□□□□□ -2.04
Shisa8J3QNX5 Gm44459-201ENSMUST00000203926 160 ntBASIC2.33□□□□□ -2.04
Shisa8J3QNX5 CT010449.1-201ENSMUST00000220624 153 ntBASIC2.33□□□□□ -2.04
Shisa8J3QNX5 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.33□□□□□ -2.04
Shisa8J3QNX5 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.33□□□□□ -2.04
Shisa8J3QNX5 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.33□□□□□ -2.04
Shisa8J3QNX5 AF357428-201ENSMUST00000083815 69 ntBASIC2.33□□□□□ -2.04
Shisa8J3QNX5 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.33□□□□□ -2.04
Shisa8J3QNX5 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Shisa8J3QNX5 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
Shisa8J3QNX5 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Shisa8J3QNX5 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.33□□□□□ -2.04
Shisa8J3QNX5 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Shisa8J3QNX5 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC2.32□□□□□ -2.04
Shisa8J3QNX5 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.32□□□□□ -2.04
Shisa8J3QNX5 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Shisa8J3QNX5 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.32□□□□□ -2.04
Shisa8J3QNX5 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
Shisa8J3QNX5 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Shisa8J3QNX5 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
Shisa8J3QNX5 Gm15497-201ENSMUST00000119137 551 ntBASIC2.32□□□□□ -2.04
Shisa8J3QNX5 Gm16021-201ENSMUST00000121176 219 ntBASIC2.32□□□□□ -2.04
Shisa8J3QNX5 Gm13345-201ENSMUST00000121928 228 ntBASIC2.32□□□□□ -2.04
Shisa8J3QNX5 Gm25424-201ENSMUST00000157612 58 ntBASIC2.32□□□□□ -2.04
Shisa8J3QNX5 Gm23380-201ENSMUST00000158448 103 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 167.6 ms