Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm28334-201ENSMUST00000186653 315 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm28688-201ENSMUST00000187301 268 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm28495-201ENSMUST00000188452 315 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm28232-201ENSMUST00000188683 315 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm28481-201ENSMUST00000189231 315 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm29059-201ENSMUST00000191534 315 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm37765-201ENSMUST00000192395 315 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm37237-201ENSMUST00000192893 315 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm36968-201ENSMUST00000193737 315 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm38290-201ENSMUST00000195238 315 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
Col6a4A2AX52 AC159203.2-201ENSMUST00000221326 193 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm5899-201ENSMUST00000071770 270 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm14884-201ENSMUST00000120456 196 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 Mir3089-201ENSMUST00000175350 84 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 Gm24713-201ENSMUST00000178850 107 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 Gm4076-201ENSMUST00000179230 965 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 Gm25448-201ENSMUST00000180065 107 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 Mir6355-201ENSMUST00000183687 106 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 Gm37361-201ENSMUST00000194345 132 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC0.41□□□□□ -2.34
Col6a4A2AX52 Gm18854-201ENSMUST00000211196 329 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 AC192334.2-201ENSMUST00000223087 1091 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 AC102291.2-201ENSMUST00000228083 367 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 Gm23503-201ENSMUST00000083903 107 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 Gm24047-201ENSMUST00000102405 104 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 Gm14417-201ENSMUST00000120036 1074 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 Gm16412-201ENSMUST00000121602 273 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 Gm14765-201ENSMUST00000121954 326 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
Col6a4A2AX52 Gm22597-201ENSMUST00000157602 80 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 Gm22164-201ENSMUST00000158413 106 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 Gm10177-202ENSMUST00000161698 207 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 Gm25253-201ENSMUST00000179958 107 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 Gm37923-201ENSMUST00000191624 161 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 Gm37399-201ENSMUST00000195224 416 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 Gm44828-201ENSMUST00000203745 106 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC0.41□□□□□ -2.34
Col6a4A2AX52 Mir10a-201ENSMUST00000083585 110 ntBASIC0.41□□□□□ -2.34
Col6a4A2AX52 Gm25847-201ENSMUST00000116793 96 ntBASIC0.4□□□□□ -2.35
Col6a4A2AX52 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.4□□□□□ -2.35
Col6a4A2AX52 Gm12053-201ENSMUST00000119022 252 ntBASIC0.4□□□□□ -2.35
Col6a4A2AX52 Gm23068-201ENSMUST00000158239 293 ntBASIC0.4□□□□□ -2.35
Col6a4A2AX52 Gm17054-201ENSMUST00000169811 259 ntBASIC0.4□□□□□ -2.35
Col6a4A2AX52 Gm20409-201ENSMUST00000173457 130 ntBASIC0.4□□□□□ -2.35
Col6a4A2AX52 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.4□□□□□ -2.35
Col6a4A2AX52 Gm22510-201ENSMUST00000179304 79 ntBASIC0.4□□□□□ -2.35
Col6a4A2AX52 Gm26336-201ENSMUST00000179449 79 ntBASIC0.4□□□□□ -2.35
Col6a4A2AX52 Gm26390-201ENSMUST00000179628 79 ntBASIC0.4□□□□□ -2.35
Col6a4A2AX52 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
Col6a4A2AX52 AC153957.1-201ENSMUST00000215235 229 ntBASIC0.4□□□□□ -2.35
Col6a4A2AX52 AC156560.1-201ENSMUST00000221425 256 ntBASIC0.4□□□□□ -2.35
Col6a4A2AX52 Gm22759-201ENSMUST00000102276 96 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 Gm23429-201ENSMUST00000122486 149 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 Gm22279-201ENSMUST00000157200 93 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 Gm22186-201ENSMUST00000157822 122 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 Gm23078-201ENSMUST00000157848 148 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 Gm22675-201ENSMUST00000158430 104 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.39□□□□□ -2.35
Col6a4A2AX52 Gm25361-201ENSMUST00000179358 76 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 Gm24464-201ENSMUST00000179697 107 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC0.39□□□□□ -2.35
Col6a4A2AX52 Gm26228-201ENSMUST00000082512 107 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 Gm25518-201ENSMUST00000083864 107 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
Col6a4A2AX52 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
Col6a4A2AX52 Gm13396-201ENSMUST00000120617 271 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 Gm11849-201ENSMUST00000121293 261 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 Gm25012-201ENSMUST00000158396 164 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
Col6a4A2AX52 Gm20477-201ENSMUST00000174028 280 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 Gm20438-201ENSMUST00000174441 329 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 Gm28299-201ENSMUST00000189908 339 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 Gm37089-201ENSMUST00000195616 129 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 AC069561.2-201ENSMUST00000217596 420 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 Gm18242-201ENSMUST00000218455 542 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 AC124569.4-201ENSMUST00000223830 1220 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 AC167669.4-201ENSMUST00000225967 140 ntBASIC0.39□□□□□ -2.35
Col6a4A2AX52 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC0.39□□□□□ -2.35
Col6a4A2AX52 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
Col6a4A2AX52 Defa-ps13-201ENSMUST00000120695 204 ntBASIC0.38□□□□□ -2.35
Col6a4A2AX52 Gm15214-201ENSMUST00000122155 470 ntBASIC0.38□□□□□ -2.35
Col6a4A2AX52 Gm15077-201ENSMUST00000122344 362 ntBASIC0.38□□□□□ -2.35
Col6a4A2AX52 Gm24221-201ENSMUST00000158833 313 ntBASIC0.38□□□□□ -2.35
Col6a4A2AX52 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.38□□□□□ -2.35
Col6a4A2AX52 Gm42855-201ENSMUST00000197388 253 ntBASIC0.38□□□□□ -2.35
Col6a4A2AX52 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC0.38□□□□□ -2.35
Col6a4A2AX52 Gm44487-201ENSMUST00000205145 325 ntBASIC0.38□□□□□ -2.35
Col6a4A2AX52 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
Col6a4A2AX52 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC0.38□□□□□ -2.35
Col6a4A2AX52 CT010506.2-201ENSMUST00000225618 183 ntBASIC0.38□□□□□ -2.35
Col6a4A2AX52 Gm24152-201ENSMUST00000082764 163 ntBASIC0.38□□□□□ -2.35
Col6a4A2AX52 Gm23516-201ENSMUST00000093728 107 ntBASIC0.38□□□□□ -2.35
Col6a4A2AX52 Gm12806-201ENSMUST00000119384 268 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms