Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
CtcflA2APF3 Gm29397-201ENSMUST00000185205 333 ntBASIC1.41□□□□□ -2.18
CtcflA2APF3 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CtcflA2APF3 Gm29005-201ENSMUST00000186773 320 ntBASIC1.41□□□□□ -2.18
CtcflA2APF3 Gm28848-201ENSMUST00000189984 168 ntBASIC1.41□□□□□ -2.18
CtcflA2APF3 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.41□□□□□ -2.18
CtcflA2APF3 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.41□□□□□ -2.18
CtcflA2APF3 Gm30155-201ENSMUST00000223458 339 ntBASIC1.41□□□□□ -2.18
CtcflA2APF3 Snord68-201ENSMUST00000082516 86 ntBASIC1.41□□□□□ -2.18
CtcflA2APF3 Gm23100-201ENSMUST00000083455 141 ntBASIC1.41□□□□□ -2.18
CtcflA2APF3 Gm22365-201ENSMUST00000093750 117 ntBASIC1.41□□□□□ -2.18
CtcflA2APF3 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
CtcflA2APF3 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.18
CtcflA2APF3 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.4□□□□□ -2.19
CtcflA2APF3 Gm13396-201ENSMUST00000120617 271 ntBASIC1.4□□□□□ -2.19
CtcflA2APF3 Gm6956-201ENSMUST00000134724 546 ntBASIC1.4□□□□□ -2.19
CtcflA2APF3 Gm25827-201ENSMUST00000157089 107 ntBASIC1.4□□□□□ -2.19
CtcflA2APF3 Gm24499-201ENSMUST00000158446 104 ntBASIC1.4□□□□□ -2.19
CtcflA2APF3 Gm25936-201ENSMUST00000179952 114 ntBASIC1.4□□□□□ -2.19
CtcflA2APF3 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.4□□□□□ -2.19
CtcflA2APF3 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.4□□□□□ -2.19
CtcflA2APF3 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.4□□□□□ -2.19
CtcflA2APF3 Gm37162-201ENSMUST00000191708 551 ntBASIC1.4□□□□□ -2.19
CtcflA2APF3 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CtcflA2APF3 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.4□□□□□ -2.19
CtcflA2APF3 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.4□□□□□ -2.19
CtcflA2APF3 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.4□□□□□ -2.19
CtcflA2APF3 Gm23731-201ENSMUST00000083749 107 ntBASIC1.4□□□□□ -2.19
CtcflA2APF3 Gm23041-201ENSMUST00000083868 106 ntBASIC1.4□□□□□ -2.19
CtcflA2APF3 Gm23010-201ENSMUST00000104151 126 ntBASIC1.39□□□□□ -2.19
CtcflA2APF3 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.39□□□□□ -2.19
CtcflA2APF3 Gm23120-201ENSMUST00000157654 287 ntBASIC1.39□□□□□ -2.19
CtcflA2APF3 Gm24348-201ENSMUST00000158710 130 ntBASIC1.39□□□□□ -2.19
CtcflA2APF3 Gm16038-201ENSMUST00000159317 193 ntBASIC1.39□□□□□ -2.19
CtcflA2APF3 Gm17113-201ENSMUST00000170118 171 ntBASIC1.39□□□□□ -2.19
CtcflA2APF3 Gm27711-201ENSMUST00000183802 118 ntBASIC1.39□□□□□ -2.19
CtcflA2APF3 Gm43238-201ENSMUST00000196463 359 ntBASIC1.39□□□□□ -2.19
CtcflA2APF3 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.39□□□□□ -2.19
CtcflA2APF3 Gm34783-201ENSMUST00000209159 303 ntBASIC1.39□□□□□ -2.19
CtcflA2APF3 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
CtcflA2APF3 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.39□□□□□ -2.19
CtcflA2APF3 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.39□□□□□ -2.19
CtcflA2APF3 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.38□□□□□ -2.19
CtcflA2APF3 Gm11798-201ENSMUST00000119150 421 ntBASIC1.38□□□□□ -2.19
CtcflA2APF3 Gm13729-201ENSMUST00000120328 406 ntBASIC1.38□□□□□ -2.19
CtcflA2APF3 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.38□□□□□ -2.19
CtcflA2APF3 Gm23983-201ENSMUST00000157142 114 ntBASIC1.38□□□□□ -2.19
CtcflA2APF3 Gm25333-201ENSMUST00000158035 246 ntBASIC1.38□□□□□ -2.19
CtcflA2APF3 Gm24394-201ENSMUST00000158141 123 ntBASIC1.38□□□□□ -2.19
CtcflA2APF3 Gm17100-201ENSMUST00000168963 272 ntBASIC1.38□□□□□ -2.19
CtcflA2APF3 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.38□□□□□ -2.19
CtcflA2APF3 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CtcflA2APF3 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.38□□□□□ -2.19
CtcflA2APF3 Gm37399-201ENSMUST00000195224 416 ntBASIC1.38□□□□□ -2.19
CtcflA2APF3 Gm38109-201ENSMUST00000195386 181 ntBASIC1.38□□□□□ -2.19
CtcflA2APF3 Gm45296-201ENSMUST00000209625 205 ntBASIC1.38□□□□□ -2.19
CtcflA2APF3 AC109212.1-201ENSMUST00000215561 427 ntBASIC1.38□□□□□ -2.19
CtcflA2APF3 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.38□□□□□ -2.19
CtcflA2APF3 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.38□□□□□ -2.19
CtcflA2APF3 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CtcflA2APF3 Gm26249-201ENSMUST00000116708 118 ntBASIC1.37□□□□□ -2.19
CtcflA2APF3 Gm12351-201ENSMUST00000118727 292 ntBASIC1.37□□□□□ -2.19
CtcflA2APF3 Gm14574-201ENSMUST00000120644 279 ntBASIC1.37□□□□□ -2.19
CtcflA2APF3 Gm14972-201ENSMUST00000121780 364 ntBASIC1.37□□□□□ -2.19
CtcflA2APF3 Gm23858-201ENSMUST00000158384 106 ntBASIC1.37□□□□□ -2.19
CtcflA2APF3 Gm24174-201ENSMUST00000158933 111 ntBASIC1.37□□□□□ -2.19
CtcflA2APF3 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.37□□□□□ -2.19
CtcflA2APF3 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC1.37□□□□□ -2.19
CtcflA2APF3 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC1.37□□□□□ -2.19
CtcflA2APF3 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC1.37□□□□□ -2.19
CtcflA2APF3 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC1.37□□□□□ -2.19
CtcflA2APF3 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC1.37□□□□□ -2.19
CtcflA2APF3 Gm25730-201ENSMUST00000178753 165 ntBASIC1.37□□□□□ -2.19
CtcflA2APF3 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC1.37□□□□□ -2.19
CtcflA2APF3 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC1.37□□□□□ -2.19
CtcflA2APF3 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC1.37□□□□□ -2.19
CtcflA2APF3 Gm27845-201ENSMUST00000184479 114 ntBASIC1.37□□□□□ -2.19
CtcflA2APF3 Gm28995-201ENSMUST00000186625 261 ntBASIC1.37□□□□□ -2.19
CtcflA2APF3 Gm20257-202ENSMUST00000188643 130 ntBASIC1.37□□□□□ -2.19
CtcflA2APF3 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.37□□□□□ -2.19
CtcflA2APF3 Mir1291-201ENSMUST00000199842 117 ntBASIC1.37□□□□□ -2.19
CtcflA2APF3 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC1.37□□□□□ -2.19
CtcflA2APF3 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.37□□□□□ -2.19
CtcflA2APF3 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.37□□□□□ -2.19
CtcflA2APF3 n-R5s94-201ENSMUST00000082573 119 ntBASIC1.37□□□□□ -2.19
CtcflA2APF3 Snora34-201ENSMUST00000083402 138 ntBASIC1.37□□□□□ -2.19
CtcflA2APF3 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CtcflA2APF3 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.37□□□□□ -2.19
CtcflA2APF3 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
CtcflA2APF3 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
CtcflA2APF3 Gm26500-201ENSMUST00000101867 106 ntBASIC1.36□□□□□ -2.19
CtcflA2APF3 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CtcflA2APF3 Mir872-201ENSMUST00000104728 81 ntBASIC1.36□□□□□ -2.19
CtcflA2APF3 Gm11857-201ENSMUST00000119817 324 ntBASIC1.36□□□□□ -2.19
CtcflA2APF3 Gm23435-201ENSMUST00000157183 156 ntBASIC1.36□□□□□ -2.19
CtcflA2APF3 Gm23048-201ENSMUST00000157237 129 ntBASIC1.36□□□□□ -2.19
CtcflA2APF3 Gm25982-201ENSMUST00000157920 101 ntBASIC1.36□□□□□ -2.19
CtcflA2APF3 Gm24192-201ENSMUST00000157978 145 ntBASIC1.36□□□□□ -2.19
CtcflA2APF3 Gm27410-201ENSMUST00000183851 115 ntBASIC1.36□□□□□ -2.19
CtcflA2APF3 Mir7014-201ENSMUST00000183853 63 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 188.1 ms