Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm37713-201ENSMUST00000191746 198 ntBASIC0.25□□□□□ -2.37
Trav9-4A0A0B4J1K2 AL450317.1-201ENSMUST00000213941 291 ntBASIC0.25□□□□□ -2.37
Trav9-4A0A0B4J1K2 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.25□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm46997-201ENSMUST00000222108 217 ntBASIC0.25□□□□□ -2.37
Trav9-4A0A0B4J1K2 Rny1-201ENSMUST00000083767 112 ntBASIC0.25□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.24□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm14884-201ENSMUST00000120456 196 ntBASIC0.24□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm13153-201ENSMUST00000120969 637 ntBASIC0.24□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm25047-201ENSMUST00000122667 104 ntBASIC0.24□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm22796-201ENSMUST00000157234 106 ntBASIC0.24□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm37997-201ENSMUST00000193515 267 ntBASIC0.24□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm44462-201ENSMUST00000199696 129 ntBASIC0.24□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm29848-201ENSMUST00000203107 295 ntBASIC0.24□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm44828-201ENSMUST00000203745 106 ntBASIC0.24□□□□□ -2.37
Trav9-4A0A0B4J1K2 AC153957.1-201ENSMUST00000215235 229 ntBASIC0.24□□□□□ -2.37
Trav9-4A0A0B4J1K2 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.24□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm11351-202ENSMUST00000225724 478 ntBASIC0.24□□□□□ -2.37
Trav9-4A0A0B4J1K2 DQ267101-201ENSMUST00000082562 73 ntBASIC0.24□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
Trav9-4A0A0B4J1K2 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm26249-201ENSMUST00000116708 118 ntBASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm11862-201ENSMUST00000119678 659 ntBASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm14761-201ENSMUST00000121363 262 ntBASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm22522-201ENSMUST00000158271 151 ntBASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm22668-201ENSMUST00000158716 260 ntBASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm24678-201ENSMUST00000158756 104 ntBASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm22290-201ENSMUST00000177655 107 ntBASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm22583-201ENSMUST00000178031 107 ntBASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm20874-201ENSMUST00000178356 663 ntBASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm29022-201ENSMUST00000190702 225 ntBASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 Trav5d-2-201ENSMUST00000196107 275 ntBASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 Trav5n-2-201ENSMUST00000197136 275 ntBASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 Mir219b-201ENSMUST00000198317 65 ntBASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 Trdv3-201ENSMUST00000198551 309 ntBASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm44976-201ENSMUST00000205543 261 ntBASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm19855-201ENSMUST00000210145 249 ntBASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm25650-201ENSMUST00000083784 162 ntBASIC0.23□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm26339-201ENSMUST00000102368 99 ntBASIC0.22□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm14599-201ENSMUST00000120469 474 ntBASIC0.22□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm13368-201ENSMUST00000122443 430 ntBASIC0.22□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm24481-201ENSMUST00000157210 102 ntBASIC0.22□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm25491-201ENSMUST00000158733 308 ntBASIC0.22□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm25162-201ENSMUST00000158906 159 ntBASIC0.22□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm25956-201ENSMUST00000175115 217 ntBASIC0.22□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm26116-201ENSMUST00000175600 77 ntBASIC0.22□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm18396-201ENSMUST00000177095 361 ntBASIC0.22□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm9830-201ENSMUST00000178509 357 ntBASIC0.22□□□□□ -2.37
Trav9-4A0A0B4J1K2 Mir6364-201ENSMUST00000183396 86 ntBASIC0.22□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm34073-201ENSMUST00000195736 212 ntBASIC0.22□□□□□ -2.37
Trav9-4A0A0B4J1K2 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC0.22□□□□□ -2.37
Trav9-4A0A0B4J1K2 AC131085.1-201ENSMUST00000224746 656 ntBASIC0.22□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm25080-201ENSMUST00000082526 107 ntBASIC0.22□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm25138-201ENSMUST00000083248 136 ntBASIC0.22□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.22□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm25378-201ENSMUST00000104333 129 ntBASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm25563-201ENSMUST00000104603 74 ntBASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm12106-201ENSMUST00000116006 1200 ntBASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm14898-201ENSMUST00000120202 645 ntBASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm6272-201ENSMUST00000121256 171 ntBASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm14713-201ENSMUST00000122362 686 ntBASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm23118-201ENSMUST00000122657 187 ntBASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm26152-201ENSMUST00000157427 101 ntBASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm22817-201ENSMUST00000157448 356 ntBASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm7925-201ENSMUST00000166690 401 ntBASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Mir15a-201ENSMUST00000175266 84 ntBASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm20257-202ENSMUST00000188643 130 ntBASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm38395-201ENSMUST00000199904 830 ntBASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm31520-201ENSMUST00000203048 733 ntBASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.21□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm24271-201ENSMUST00000102327 111 ntBASIC0.2□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm24342-201ENSMUST00000103907 104 ntBASIC0.2□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm23130-201ENSMUST00000104252 74 ntBASIC0.2□□□□□ -2.38
Trav9-4A0A0B4J1K2 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.2□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm13967-201ENSMUST00000120404 380 ntBASIC0.2□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm24439-201ENSMUST00000157894 117 ntBASIC0.2□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm22945-201ENSMUST00000158557 157 ntBASIC0.2□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm23777-201ENSMUST00000158994 259 ntBASIC0.2□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm17100-201ENSMUST00000168963 272 ntBASIC0.2□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
Trav9-4A0A0B4J1K2 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC0.2□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm27289-201ENSMUST00000183341 82 ntBASIC0.2□□□□□ -2.38
Trav9-4A0A0B4J1K2 Gm28257-201ENSMUST00000185244 463 ntBASIC0.2□□□□□ -2.38
Trav9-4A0A0B4J1K2 AC069561.2-201ENSMUST00000217596 420 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms