Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Snord13-201ENSMUST00000157627 104 ntBASIC1.09□□□□□ -2.23
Trbv1A0A0B4J1G7 Gm29397-201ENSMUST00000185205 333 ntBASIC1.09□□□□□ -2.23
Trbv1A0A0B4J1G7 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.09□□□□□ -2.23
Trbv1A0A0B4J1G7 Gm44408-201ENSMUST00000200205 66 ntBASIC1.09□□□□□ -2.23
Trbv1A0A0B4J1G7 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.09□□□□□ -2.23
Trbv1A0A0B4J1G7 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.09□□□□□ -2.23
Trbv1A0A0B4J1G7 Gm25579-201ENSMUST00000083407 106 ntBASIC1.09□□□□□ -2.23
Trbv1A0A0B4J1G7 Mir320-201ENSMUST00000083594 82 ntBASIC1.09□□□□□ -2.23
Trbv1A0A0B4J1G7 Gm3867-201ENSMUST00000086108 279 ntBASIC1.09□□□□□ -2.23
Trbv1A0A0B4J1G7 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.09□□□□□ -2.24
Trbv1A0A0B4J1G7 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
Trbv1A0A0B4J1G7 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm14803-201ENSMUST00000117163 361 ntBASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm14882-201ENSMUST00000117216 218 ntBASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm12309-201ENSMUST00000119889 182 ntBASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm11606-201ENSMUST00000120706 617 ntBASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm14287-201ENSMUST00000121060 117 ntBASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm6025-201ENSMUST00000121517 201 ntBASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm11254-201ENSMUST00000122368 653 ntBASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm8121-201ENSMUST00000153583 499 ntBASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm25936-201ENSMUST00000179952 114 ntBASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm26200-201ENSMUST00000180273 79 ntBASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 Mir7225-201ENSMUST00000184178 54 ntBASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm38395-201ENSMUST00000199904 830 ntBASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm16976-205ENSMUST00000227324 226 ntBASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.08□□□□□ -2.24
Trbv1A0A0B4J1G7 Mir301b-201ENSMUST00000102333 97 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Mir653-201ENSMUST00000102402 85 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm13475-201ENSMUST00000119290 234 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm6829-201ENSMUST00000119858 360 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm27926-201ENSMUST00000157180 66 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm23670-201ENSMUST00000157469 119 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm23558-201ENSMUST00000157823 80 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Rnu7-201ENSMUST00000158458 62 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm26401-201ENSMUST00000158502 76 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Cfap61-214ENSMUST00000167179 183 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Mir3057-201ENSMUST00000175040 91 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm25958-201ENSMUST00000175114 71 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm22862-201ENSMUST00000178593 121 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm26180-201ENSMUST00000179942 107 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm43427-201ENSMUST00000198188 331 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm43993-201ENSMUST00000203972 247 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm45456-201ENSMUST00000210841 243 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 CT025526.1-201ENSMUST00000217327 267 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 AC104832.1-201ENSMUST00000222938 550 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 AC108945.1-201ENSMUST00000226477 94 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.07□□□□□ -2.24
Trbv1A0A0B4J1G7 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm24865-201ENSMUST00000103246 96 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Mir872-201ENSMUST00000104728 81 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm9059-201ENSMUST00000118319 183 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm15443-201ENSMUST00000118947 820 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm14937-201ENSMUST00000119709 208 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm6956-201ENSMUST00000134724 546 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm23435-201ENSMUST00000157183 156 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm24677-201ENSMUST00000158755 150 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm3027-201ENSMUST00000167579 451 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Mir6346-201ENSMUST00000183982 81 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm27236-201ENSMUST00000184147 442 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm27539-201ENSMUST00000184971 224 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm9156-201ENSMUST00000189660 463 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm37162-201ENSMUST00000191708 551 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm43035-201ENSMUST00000197626 517 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm33654-201ENSMUST00000221704 215 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm21937-201ENSMUST00000222825 218 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm23627-201ENSMUST00000082459 107 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm22502-201ENSMUST00000082488 107 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm22977-201ENSMUST00000082615 107 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm25357-201ENSMUST00000082745 72 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm24149-201ENSMUST00000082757 107 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Snora3-201ENSMUST00000083082 132 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.06□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm11862-201ENSMUST00000119678 659 ntBASIC1.05□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm22027-201ENSMUST00000122737 127 ntBASIC1.05□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm22559-201ENSMUST00000157329 134 ntBASIC1.05□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm22556-201ENSMUST00000157803 100 ntBASIC1.05□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm17052-201ENSMUST00000165496 289 ntBASIC1.05□□□□□ -2.24
Trbv1A0A0B4J1G7 Gm24510-201ENSMUST00000174965 94 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms