Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
Trav3-4A0A075B654 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.03□□□□□ -2.4
Trav3-4A0A075B654 Mir6240-201ENSMUST00000184281 117 ntBASIC0.03□□□□□ -2.4
Trav3-4A0A075B654 Gm37757-201ENSMUST00000193072 210 ntBASIC0.03□□□□□ -2.4
Trav3-4A0A075B654 Gm43513-201ENSMUST00000199779 1076 ntBASIC0.03□□□□□ -2.4
Trav3-4A0A075B654 Gm29848-201ENSMUST00000203107 295 ntBASIC0.03□□□□□ -2.4
Trav3-4A0A075B654 Platr25-208ENSMUST00000222602 939 ntBASIC0.03□□□□□ -2.4
Trav3-4A0A075B654 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
Trav3-4A0A075B654 Gm26143-201ENSMUST00000104480 108 ntBASIC0.02□□□□□ -2.41
Trav3-4A0A075B654 Gm12433-201ENSMUST00000119659 255 ntBASIC0.02□□□□□ -2.41
Trav3-4A0A075B654 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC0.02□□□□□ -2.41
Trav3-4A0A075B654 Gm25952-201ENSMUST00000175329 74 ntBASIC0.02□□□□□ -2.41
Trav3-4A0A075B654 Gm37946-201ENSMUST00000192064 347 ntBASIC0.02□□□□□ -2.41
Trav3-4A0A075B654 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
Trav3-4A0A075B654 Gm45541-201ENSMUST00000210443 54 ntBASIC0.02□□□□□ -2.41
Trav3-4A0A075B654 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.02□□□□□ -2.41
Trav3-4A0A075B654 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.02□□□□□ -2.41
Trav3-4A0A075B654 AC102369.2-201ENSMUST00000219725 1679 ntBASIC0.02□□□□□ -2.41
Trav3-4A0A075B654 Gm24430-201ENSMUST00000104077 104 ntBASIC0.01□□□□□ -2.41
Trav3-4A0A075B654 Gm9059-201ENSMUST00000118319 183 ntBASIC0.01□□□□□ -2.41
Trav3-4A0A075B654 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.01□□□□□ -2.41
Trav3-4A0A075B654 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC0.01□□□□□ -2.41
Trav3-4A0A075B654 Mir3108-201ENSMUST00000175500 79 ntBASIC0.01□□□□□ -2.41
Trav3-4A0A075B654 Mir1954-201ENSMUST00000175595 86 ntBASIC0.01□□□□□ -2.41
Trav3-4A0A075B654 Gm23862-201ENSMUST00000180342 94 ntBASIC0.01□□□□□ -2.41
Trav3-4A0A075B654 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC0.01□□□□□ -2.41
Trav3-4A0A075B654 AC167669.4-201ENSMUST00000225967 140 ntBASIC0.01□□□□□ -2.41
Trav3-4A0A075B654 Gm24038-201ENSMUST00000082872 159 ntBASIC0.01□□□□□ -2.41
Trav3-4A0A075B654 Gm14761-201ENSMUST00000121363 262 ntBASIC0□□□□□ -2.41
Trav3-4A0A075B654 Gm13368-201ENSMUST00000122443 430 ntBASIC0□□□□□ -2.41
Trav3-4A0A075B654 Gm25901-201ENSMUST00000158494 130 ntBASIC0□□□□□ -2.41
Trav3-4A0A075B654 Gm25413-201ENSMUST00000158544 312 ntBASIC0□□□□□ -2.41
Trav3-4A0A075B654 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC0□□□□□ -2.41
Trav3-4A0A075B654 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC0□□□□□ -2.41
Trav3-4A0A075B654 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC0□□□□□ -2.41
Trav3-4A0A075B654 Gm28408-201ENSMUST00000191557 463 ntBASIC0□□□□□ -2.41
Trav3-4A0A075B654 Mir3087-201ENSMUST00000199405 56 ntBASIC0□□□□□ -2.41
Trav3-4A0A075B654 AC154515.1-201ENSMUST00000226085 2841 ntBASIC-0.01□□□□□ -2.41
Trav3-4A0A075B654 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC-0.01□□□□□ -2.41
Trav3-4A0A075B654 Mir710-201ENSMUST00000102088 110 ntBASIC-0.01□□□□□ -2.41
Trav3-4A0A075B654 Gm14898-201ENSMUST00000120202 645 ntBASIC-0.01□□□□□ -2.41
Trav3-4A0A075B654 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
Trav3-4A0A075B654 Mir3569-201ENSMUST00000185080 58 ntBASIC-0.01□□□□□ -2.41
Trav3-4A0A075B654 Mir703-201ENSMUST00000197105 109 ntBASIC-0.01□□□□□ -2.41
Trav3-4A0A075B654 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC-0.01□□□□□ -2.41
Trav3-4A0A075B654 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
Trav3-4A0A075B654 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC-0.01□□□□□ -2.41
Trav3-4A0A075B654 Gm45815-201ENSMUST00000220241 146 ntBASIC-0.01□□□□□ -2.41
Trav3-4A0A075B654 Gm30155-201ENSMUST00000223458 339 ntBASIC-0.01□□□□□ -2.41
Trav3-4A0A075B654 Gm25703-201ENSMUST00000083123 151 ntBASIC-0.01□□□□□ -2.41
Trav3-4A0A075B654 Mir324-201ENSMUST00000083600 89 ntBASIC-0.01□□□□□ -2.41
Trav3-4A0A075B654 Gm22545-201ENSMUST00000104350 132 ntBASIC-0.02□□□□□ -2.41
Trav3-4A0A075B654 Gm15061-201ENSMUST00000121076 1046 ntBASIC-0.02□□□□□ -2.41
Trav3-4A0A075B654 n-R5s188-201ENSMUST00000122646 105 ntBASIC-0.02□□□□□ -2.41
Trav3-4A0A075B654 Gm26285-201ENSMUST00000177923 107 ntBASIC-0.02□□□□□ -2.41
Trav3-4A0A075B654 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
Trav3-4A0A075B654 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
Trav3-4A0A075B654 Gm23622-201ENSMUST00000082460 107 ntBASIC-0.02□□□□□ -2.41
Trav3-4A0A075B654 Gm22704-201ENSMUST00000083027 137 ntBASIC-0.02□□□□□ -2.41
Trav3-4A0A075B654 Gm22884-201ENSMUST00000083127 140 ntBASIC-0.02□□□□□ -2.41
Trav3-4A0A075B654 Gm14568-201ENSMUST00000119321 294 ntBASIC-0.03□□□□□ -2.41
Trav3-4A0A075B654 Gm24840-201ENSMUST00000122603 147 ntBASIC-0.03□□□□□ -2.41
Trav3-4A0A075B654 Gm23118-201ENSMUST00000122657 187 ntBASIC-0.03□□□□□ -2.41
Trav3-4A0A075B654 n-R5s18-201ENSMUST00000122740 121 ntBASIC-0.03□□□□□ -2.41
Trav3-4A0A075B654 Gm23230-201ENSMUST00000157298 133 ntBASIC-0.03□□□□□ -2.41
Trav3-4A0A075B654 Gm24960-201ENSMUST00000157923 90 ntBASIC-0.03□□□□□ -2.41
Trav3-4A0A075B654 Scarna8-201ENSMUST00000158333 131 ntBASIC-0.03□□□□□ -2.41
Trav3-4A0A075B654 Gm25750-201ENSMUST00000175483 112 ntBASIC-0.03□□□□□ -2.41
Trav3-4A0A075B654 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC-0.03□□□□□ -2.41
Trav3-4A0A075B654 Mir6540-201ENSMUST00000184886 108 ntBASIC-0.03□□□□□ -2.41
Trav3-4A0A075B654 Gm37997-201ENSMUST00000193515 267 ntBASIC-0.03□□□□□ -2.41
Trav3-4A0A075B654 AC164304.1-201ENSMUST00000226920 272 ntBASIC-0.03□□□□□ -2.41
Trav3-4A0A075B654 Snord95-201ENSMUST00000082846 68 ntBASIC-0.03□□□□□ -2.41
Trav3-4A0A075B654 Gm24045-201ENSMUST00000083113 98 ntBASIC-0.03□□□□□ -2.41
Trav3-4A0A075B654 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
Trav3-4A0A075B654 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
Trav3-4A0A075B654 Gm6272-201ENSMUST00000121256 171 ntBASIC-0.04□□□□□ -2.42
Trav3-4A0A075B654 Gm25968-201ENSMUST00000157167 100 ntBASIC-0.04□□□□□ -2.42
Trav3-4A0A075B654 Gm24439-201ENSMUST00000157894 117 ntBASIC-0.04□□□□□ -2.42
Trav3-4A0A075B654 Gm25557-201ENSMUST00000158084 315 ntBASIC-0.04□□□□□ -2.42
Trav3-4A0A075B654 Gm23761-201ENSMUST00000158347 104 ntBASIC-0.04□□□□□ -2.42
Trav3-4A0A075B654 Gm27894-201ENSMUST00000184177 92 ntBASIC-0.04□□□□□ -2.42
Trav3-4A0A075B654 Gm28661-201ENSMUST00000188231 681 ntBASIC-0.04□□□□□ -2.42
Trav3-4A0A075B654 Gm44137-201ENSMUST00000203670 367 ntBASIC-0.04□□□□□ -2.42
Trav3-4A0A075B654 AC167229.1-201ENSMUST00000220057 469 ntBASIC-0.04□□□□□ -2.42
Trav3-4A0A075B654 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC-0.04□□□□□ -2.42
Trav3-4A0A075B654 Gm24624-201ENSMUST00000082617 164 ntBASIC-0.04□□□□□ -2.42
Trav3-4A0A075B654 Gm26082-201ENSMUST00000104070 127 ntBASIC-0.05□□□□□ -2.42
Trav3-4A0A075B654 Gm22469-201ENSMUST00000104118 133 ntBASIC-0.05□□□□□ -2.42
Trav3-4A0A075B654 Gm6829-201ENSMUST00000119858 360 ntBASIC-0.05□□□□□ -2.42
Trav3-4A0A075B654 Gm7916-201ENSMUST00000120325 456 ntBASIC-0.05□□□□□ -2.42
Trav3-4A0A075B654 Gm14922-201ENSMUST00000121131 163 ntBASIC-0.05□□□□□ -2.42
Trav3-4A0A075B654 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
Trav3-4A0A075B654 Gm22228-201ENSMUST00000157364 101 ntBASIC-0.05□□□□□ -2.42
Trav3-4A0A075B654 Gm23535-201ENSMUST00000157542 106 ntBASIC-0.05□□□□□ -2.42
Trav3-4A0A075B654 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC-0.05□□□□□ -2.42
Trav3-4A0A075B654 Gm25312-201ENSMUST00000178972 107 ntBASIC-0.05□□□□□ -2.42
Trav3-4A0A075B654 Gm22633-201ENSMUST00000179834 107 ntBASIC-0.05□□□□□ -2.42
Trav3-4A0A075B654 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
Trav3-4A0A075B654 Gm44488-201ENSMUST00000199467 119 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms