Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Gm14765-201ENSMUST00000121954 326 ntBASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 Gm14713-201ENSMUST00000122362 686 ntBASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 Gm13368-201ENSMUST00000122443 430 ntBASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 Gm23118-201ENSMUST00000122657 187 ntBASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 Gm24379-201ENSMUST00000122695 86 ntBASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 Gm22522-201ENSMUST00000158271 151 ntBASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 Gm37869-201ENSMUST00000193385 595 ntBASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 Gm44308-201ENSMUST00000197080 99 ntBASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 Gm38395-201ENSMUST00000199904 830 ntBASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 Gm42506-201ENSMUST00000202009 150 ntBASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 DQ267101-201ENSMUST00000082562 73 ntBASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 Gm22575-201ENSMUST00000082981 110 ntBASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.25□□□□□ -2.37
Trav9-1A0A075B601 Gm25563-201ENSMUST00000104603 74 ntBASIC0.25□□□□□ -2.37
Trav9-1A0A075B601 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC0.25□□□□□ -2.37
Trav9-1A0A075B601 Gm24439-201ENSMUST00000157894 117 ntBASIC0.25□□□□□ -2.37
Trav9-1A0A075B601 Gm25491-201ENSMUST00000158733 308 ntBASIC0.25□□□□□ -2.37
Trav9-1A0A075B601 Gm23777-201ENSMUST00000158994 259 ntBASIC0.25□□□□□ -2.37
Trav9-1A0A075B601 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
Trav9-1A0A075B601 Gm26116-201ENSMUST00000175600 77 ntBASIC0.25□□□□□ -2.37
Trav9-1A0A075B601 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0.25□□□□□ -2.37
Trav9-1A0A075B601 Gm22633-201ENSMUST00000179834 107 ntBASIC0.25□□□□□ -2.37
Trav9-1A0A075B601 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
Trav9-1A0A075B601 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC0.25□□□□□ -2.37
Trav9-1A0A075B601 Trav5d-2-201ENSMUST00000196107 275 ntBASIC0.25□□□□□ -2.37
Trav9-1A0A075B601 Trav5n-2-201ENSMUST00000197136 275 ntBASIC0.25□□□□□ -2.37
Trav9-1A0A075B601 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC0.25□□□□□ -2.37
Trav9-1A0A075B601 Gm19855-201ENSMUST00000210145 249 ntBASIC0.25□□□□□ -2.37
Trav9-1A0A075B601 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC0.25□□□□□ -2.37
Trav9-1A0A075B601 Mir344-201ENSMUST00000083634 95 ntBASIC0.25□□□□□ -2.37
Trav9-1A0A075B601 Gm22577-201ENSMUST00000083731 109 ntBASIC0.25□□□□□ -2.37
Trav9-1A0A075B601 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.25□□□□□ -2.37
Trav9-1A0A075B601 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Gm25274-201ENSMUST00000104296 135 ntBASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Gm25378-201ENSMUST00000104333 129 ntBASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Gm12106-201ENSMUST00000116006 1200 ntBASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Gm26303-201ENSMUST00000116845 119 ntBASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Gm11248-201ENSMUST00000119568 201 ntBASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Gm11862-201ENSMUST00000119678 659 ntBASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Gm13153-201ENSMUST00000120969 637 ntBASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Gm22817-201ENSMUST00000157448 356 ntBASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Gm18396-201ENSMUST00000177095 361 ntBASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Gm26285-201ENSMUST00000177923 107 ntBASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Mir6985-201ENSMUST00000184641 61 ntBASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Gm29022-201ENSMUST00000190702 225 ntBASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Gm37997-201ENSMUST00000193515 267 ntBASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Gm44462-201ENSMUST00000199696 129 ntBASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Gm11351-202ENSMUST00000225724 478 ntBASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Gm23622-201ENSMUST00000082460 107 ntBASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Gm25650-201ENSMUST00000083784 162 ntBASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Gm23516-201ENSMUST00000093728 107 ntBASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
Trav9-1A0A075B601 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.23□□□□□ -2.37
Trav9-1A0A075B601 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.23□□□□□ -2.37
Trav9-1A0A075B601 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.23□□□□□ -2.37
Trav9-1A0A075B601 Anp32-ps-201ENSMUST00000118265 388 ntBASIC0.23□□□□□ -2.37
Trav9-1A0A075B601 Gm13967-201ENSMUST00000120404 380 ntBASIC0.23□□□□□ -2.37
Trav9-1A0A075B601 Gm14761-201ENSMUST00000121363 262 ntBASIC0.23□□□□□ -2.37
Trav9-1A0A075B601 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.23□□□□□ -2.37
Trav9-1A0A075B601 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC0.23□□□□□ -2.37
Trav9-1A0A075B601 Gm7925-201ENSMUST00000166690 401 ntBASIC0.23□□□□□ -2.37
Trav9-1A0A075B601 Mir15a-201ENSMUST00000175266 84 ntBASIC0.23□□□□□ -2.37
Trav9-1A0A075B601 Gm22584-201ENSMUST00000177935 92 ntBASIC0.23□□□□□ -2.37
Trav9-1A0A075B601 Mir6364-201ENSMUST00000183396 86 ntBASIC0.23□□□□□ -2.37
Trav9-1A0A075B601 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC0.23□□□□□ -2.37
Trav9-1A0A075B601 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC0.23□□□□□ -2.37
Trav9-1A0A075B601 Gm37709-201ENSMUST00000195074 600 ntBASIC0.23□□□□□ -2.37
Trav9-1A0A075B601 Gm44458-201ENSMUST00000196594 143 ntBASIC0.23□□□□□ -2.37
Trav9-1A0A075B601 Gm45232-201ENSMUST00000207811 162 ntBASIC0.23□□□□□ -2.37
Trav9-1A0A075B601 CT030684.2-201ENSMUST00000228946 826 ntBASIC0.23□□□□□ -2.37
Trav9-1A0A075B601 Gm5899-201ENSMUST00000071770 270 ntBASIC0.23□□□□□ -2.37
Trav9-1A0A075B601 Mir10b-201ENSMUST00000083566 68 ntBASIC0.23□□□□□ -2.37
Trav9-1A0A075B601 Mir452-201ENSMUST00000093629 85 ntBASIC0.23□□□□□ -2.37
Trav9-1A0A075B601 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.23□□□□□ -2.37
Trav9-1A0A075B601 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.22□□□□□ -2.37
Trav9-1A0A075B601 AC162910.1-201ENSMUST00000221219 1723 ntBASIC0.22□□□□□ -2.37
Trav9-1A0A075B601 Gm14884-201ENSMUST00000120456 196 ntBASIC0.22□□□□□ -2.37
Trav9-1A0A075B601 Gm26152-201ENSMUST00000157427 101 ntBASIC0.22□□□□□ -2.37
Trav9-1A0A075B601 Gm17100-201ENSMUST00000168963 272 ntBASIC0.22□□□□□ -2.37
Trav9-1A0A075B601 Gm22802-201ENSMUST00000175621 89 ntBASIC0.22□□□□□ -2.37
Trav9-1A0A075B601 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC0.22□□□□□ -2.37
Trav9-1A0A075B601 Gm28257-201ENSMUST00000185244 463 ntBASIC0.22□□□□□ -2.37
Trav9-1A0A075B601 Gm37757-201ENSMUST00000193072 210 ntBASIC0.22□□□□□ -2.37
Trav9-1A0A075B601 Gm34783-201ENSMUST00000209159 303 ntBASIC0.22□□□□□ -2.37
Trav9-1A0A075B601 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.22□□□□□ -2.37
Trav9-1A0A075B601 CT009733.1-203ENSMUST00000224033 451 ntBASIC0.22□□□□□ -2.37
Trav9-1A0A075B601 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.21□□□□□ -2.38
Trav9-1A0A075B601 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
Trav9-1A0A075B601 Gm23130-201ENSMUST00000104252 74 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms