Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm13396-201ENSMUST00000120617 271 ntBASIC1.66□□□□□ -2.14
Trim3Q9R1R2 Gm25836-201ENSMUST00000158918 123 ntBASIC1.66□□□□□ -2.14
Trim3Q9R1R2 Gm24572-201ENSMUST00000175505 88 ntBASIC1.66□□□□□ -2.14
Trim3Q9R1R2 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC1.66□□□□□ -2.14
Trim3Q9R1R2 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.66□□□□□ -2.14
Trim3Q9R1R2 Mir7017-201ENSMUST00000184894 62 ntBASIC1.66□□□□□ -2.14
Trim3Q9R1R2 Gm42960-201ENSMUST00000202160 241 ntBASIC1.66□□□□□ -2.14
Trim3Q9R1R2 Gm45654-201ENSMUST00000210980 123 ntBASIC1.66□□□□□ -2.14
Trim3Q9R1R2 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Trim3Q9R1R2 Gm33654-201ENSMUST00000221704 215 ntBASIC1.66□□□□□ -2.14
Trim3Q9R1R2 Gm21937-201ENSMUST00000222825 218 ntBASIC1.66□□□□□ -2.14
Trim3Q9R1R2 Gm26922-201ENSMUST00000082687 72 ntBASIC1.66□□□□□ -2.14
Trim3Q9R1R2 Gm26175-201ENSMUST00000083794 131 ntBASIC1.66□□□□□ -2.14
Trim3Q9R1R2 Gm42606-201ENSMUST00000114209 239 ntBASIC1.65□□□□□ -2.15
Trim3Q9R1R2 Gm13588-201ENSMUST00000120026 135 ntBASIC1.65□□□□□ -2.15
Trim3Q9R1R2 Gm6956-201ENSMUST00000134724 546 ntBASIC1.65□□□□□ -2.15
Trim3Q9R1R2 Gm25434-201ENSMUST00000158278 167 ntBASIC1.65□□□□□ -2.15
Trim3Q9R1R2 Mir3086-201ENSMUST00000175072 87 ntBASIC1.65□□□□□ -2.15
Trim3Q9R1R2 Gm24333-201ENSMUST00000175101 84 ntBASIC1.65□□□□□ -2.15
Trim3Q9R1R2 Mir7679-201ENSMUST00000183379 63 ntBASIC1.65□□□□□ -2.15
Trim3Q9R1R2 Mir6346-201ENSMUST00000183982 81 ntBASIC1.65□□□□□ -2.15
Trim3Q9R1R2 Mir7241-201ENSMUST00000184532 64 ntBASIC1.65□□□□□ -2.15
Trim3Q9R1R2 Gm10105-201ENSMUST00000184601 270 ntBASIC1.65□□□□□ -2.15
Trim3Q9R1R2 Gm29397-201ENSMUST00000185205 333 ntBASIC1.65□□□□□ -2.15
Trim3Q9R1R2 Gm28211-201ENSMUST00000190920 315 ntBASIC1.65□□□□□ -2.15
Trim3Q9R1R2 Gm44384-201ENSMUST00000200208 114 ntBASIC1.65□□□□□ -2.15
Trim3Q9R1R2 Gm7495-201ENSMUST00000215099 426 ntBASIC1.65□□□□□ -2.15
Trim3Q9R1R2 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.65□□□□□ -2.15
Trim3Q9R1R2 Gm23721-201ENSMUST00000083005 107 ntBASIC1.65□□□□□ -2.15
Trim3Q9R1R2 Gm10360-201ENSMUST00000097219 272 ntBASIC1.65□□□□□ -2.15
Trim3Q9R1R2 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Trim3Q9R1R2 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
Trim3Q9R1R2 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.64□□□□□ -2.15
Trim3Q9R1R2 Gm23010-201ENSMUST00000104151 126 ntBASIC1.64□□□□□ -2.15
Trim3Q9R1R2 Gm22731-201ENSMUST00000158086 94 ntBASIC1.64□□□□□ -2.15
Trim3Q9R1R2 Snord87-201ENSMUST00000175437 87 ntBASIC1.64□□□□□ -2.15
Trim3Q9R1R2 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.64□□□□□ -2.15
Trim3Q9R1R2 Gm18357-201ENSMUST00000188184 580 ntBASIC1.64□□□□□ -2.15
Trim3Q9R1R2 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC1.64□□□□□ -2.15
Trim3Q9R1R2 Mir1291-201ENSMUST00000199842 117 ntBASIC1.64□□□□□ -2.15
Trim3Q9R1R2 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.64□□□□□ -2.15
Trim3Q9R1R2 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC1.64□□□□□ -2.15
Trim3Q9R1R2 Gm30155-201ENSMUST00000223458 339 ntBASIC1.64□□□□□ -2.15
Trim3Q9R1R2 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Trim3Q9R1R2 Snord68-201ENSMUST00000082516 86 ntBASIC1.64□□□□□ -2.15
Trim3Q9R1R2 Snora34-201ENSMUST00000083402 138 ntBASIC1.64□□□□□ -2.15
Trim3Q9R1R2 Gm22723-201ENSMUST00000083820 129 ntBASIC1.64□□□□□ -2.15
Trim3Q9R1R2 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trim3Q9R1R2 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Trim3Q9R1R2 Gm12351-201ENSMUST00000118727 292 ntBASIC1.63□□□□□ -2.15
Trim3Q9R1R2 Gm6829-201ENSMUST00000119858 360 ntBASIC1.63□□□□□ -2.15
Trim3Q9R1R2 Gm24598-201ENSMUST00000122510 74 ntBASIC1.63□□□□□ -2.15
Trim3Q9R1R2 Gm24394-201ENSMUST00000158141 123 ntBASIC1.63□□□□□ -2.15
Trim3Q9R1R2 Gm23858-201ENSMUST00000158384 106 ntBASIC1.63□□□□□ -2.15
Trim3Q9R1R2 Gm22011-201ENSMUST00000158790 123 ntBASIC1.63□□□□□ -2.15
Trim3Q9R1R2 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
Trim3Q9R1R2 Gm23186-201ENSMUST00000180078 107 ntBASIC1.63□□□□□ -2.15
Trim3Q9R1R2 Mir6352-201ENSMUST00000184495 116 ntBASIC1.63□□□□□ -2.15
Trim3Q9R1R2 Gm28848-201ENSMUST00000189984 168 ntBASIC1.63□□□□□ -2.15
Trim3Q9R1R2 Gm43624-201ENSMUST00000197368 180 ntBASIC1.63□□□□□ -2.15
Trim3Q9R1R2 Gm43472-201ENSMUST00000200175 154 ntBASIC1.63□□□□□ -2.15
Trim3Q9R1R2 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.63□□□□□ -2.15
Trim3Q9R1R2 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
Trim3Q9R1R2 Gm13432-201ENSMUST00000118861 241 ntBASIC1.62□□□□□ -2.15
Trim3Q9R1R2 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.62□□□□□ -2.15
Trim3Q9R1R2 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.62□□□□□ -2.15
Trim3Q9R1R2 Gm23435-201ENSMUST00000157183 156 ntBASIC1.62□□□□□ -2.15
Trim3Q9R1R2 Gm22338-201ENSMUST00000157715 129 ntBASIC1.62□□□□□ -2.15
Trim3Q9R1R2 Gm24222-201ENSMUST00000158834 93 ntBASIC1.62□□□□□ -2.15
Trim3Q9R1R2 Gm24487-201ENSMUST00000178017 63 ntBASIC1.62□□□□□ -2.15
Trim3Q9R1R2 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.62□□□□□ -2.15
Trim3Q9R1R2 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.62□□□□□ -2.15
Trim3Q9R1R2 Gm45296-201ENSMUST00000209625 205 ntBASIC1.62□□□□□ -2.15
Trim3Q9R1R2 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.62□□□□□ -2.15
Trim3Q9R1R2 Gm24043-201ENSMUST00000083108 116 ntBASIC1.62□□□□□ -2.15
Trim3Q9R1R2 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.62□□□□□ -2.15
Trim3Q9R1R2 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.61□□□□□ -2.15
Trim3Q9R1R2 Mir466f-3-201ENSMUST00000104788 94 ntBASIC1.61□□□□□ -2.15
Trim3Q9R1R2 Gm22193-201ENSMUST00000116868 76 ntBASIC1.61□□□□□ -2.15
Trim3Q9R1R2 Gm14574-201ENSMUST00000120644 279 ntBASIC1.61□□□□□ -2.15
Trim3Q9R1R2 Gm25279-201ENSMUST00000122608 133 ntBASIC1.61□□□□□ -2.15
Trim3Q9R1R2 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.61□□□□□ -2.15
Trim3Q9R1R2 Gm23120-201ENSMUST00000157654 287 ntBASIC1.61□□□□□ -2.15
Trim3Q9R1R2 Gm24192-201ENSMUST00000157978 145 ntBASIC1.61□□□□□ -2.15
Trim3Q9R1R2 Gm22113-201ENSMUST00000158343 104 ntBASIC1.61□□□□□ -2.15
Trim3Q9R1R2 Gm20462-201ENSMUST00000172623 408 ntBASIC1.61□□□□□ -2.15
Trim3Q9R1R2 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.61□□□□□ -2.15
Trim3Q9R1R2 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Trim3Q9R1R2 Gm7654-201ENSMUST00000186738 683 ntBASIC1.61□□□□□ -2.15
Trim3Q9R1R2 Gm23041-201ENSMUST00000083868 106 ntBASIC1.61□□□□□ -2.15
Trim3Q9R1R2 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Trim3Q9R1R2 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
Trim3Q9R1R2 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Trim3Q9R1R2 Gm14803-201ENSMUST00000117163 361 ntBASIC1.6□□□□□ -2.15
Trim3Q9R1R2 Gm11798-201ENSMUST00000119150 421 ntBASIC1.6□□□□□ -2.15
Trim3Q9R1R2 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.6□□□□□ -2.15
Trim3Q9R1R2 Gm25827-201ENSMUST00000157089 107 ntBASIC1.6□□□□□ -2.15
Trim3Q9R1R2 Gm23670-201ENSMUST00000157469 119 ntBASIC1.6□□□□□ -2.15
Trim3Q9R1R2 Gm25982-201ENSMUST00000157920 101 ntBASIC1.6□□□□□ -2.15
Trim3Q9R1R2 Gm24348-201ENSMUST00000158710 130 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 164 ms