Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm30738-201ENSMUST00000221346 502 ntBASIC-0.3□□□□□ -2.46
Scn11aQ9R053 Gm12797-201ENSMUST00000118645 273 ntBASIC-0.31□□□□□ -2.46
Scn11aQ9R053 Gm14517-201ENSMUST00000119040 337 ntBASIC-0.31□□□□□ -2.46
Scn11aQ9R053 Gm15878-201ENSMUST00000127561 306 ntBASIC-0.31□□□□□ -2.46
Scn11aQ9R053 Gm25371-201ENSMUST00000158162 101 ntBASIC-0.31□□□□□ -2.46
Scn11aQ9R053 Gm23858-201ENSMUST00000158384 106 ntBASIC-0.31□□□□□ -2.46
Scn11aQ9R053 Gm22510-201ENSMUST00000179304 79 ntBASIC-0.31□□□□□ -2.46
Scn11aQ9R053 Gm26336-201ENSMUST00000179449 79 ntBASIC-0.31□□□□□ -2.46
Scn11aQ9R053 Gm26390-201ENSMUST00000179628 79 ntBASIC-0.31□□□□□ -2.46
Scn11aQ9R053 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.31□□□□□ -2.46
Scn11aQ9R053 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC-0.31□□□□□ -2.46
Scn11aQ9R053 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC-0.31□□□□□ -2.46
Scn11aQ9R053 Gm14917-201ENSMUST00000118872 2105 ntBASIC-0.31□□□□□ -2.46
Scn11aQ9R053 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Rnu7-201ENSMUST00000158458 62 ntBASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Gm38154-201ENSMUST00000195444 340 ntBASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Gm26128-201ENSMUST00000083170 110 ntBASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC-0.32□□□□□ -2.46
Scn11aQ9R053 AC124426.1-203ENSMUST00000221814 1362 ntBASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Gm13343-201ENSMUST00000116474 105 ntBASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Gm4910-201ENSMUST00000119605 366 ntBASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Gm23656-201ENSMUST00000122626 112 ntBASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Gm25162-201ENSMUST00000158906 159 ntBASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Gm24668-201ENSMUST00000158935 104 ntBASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Gm2962-201ENSMUST00000159266 336 ntBASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Gm24321-201ENSMUST00000175348 80 ntBASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Gm37102-201ENSMUST00000195740 1105 ntBASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Gm5955-201ENSMUST00000222712 219 ntBASIC-0.32□□□□□ -2.46
Scn11aQ9R053 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Gm26055-201ENSMUST00000083038 107 ntBASIC-0.32□□□□□ -2.46
Scn11aQ9R053 Gm11065-201ENSMUST00000111462 228 ntBASIC-0.33□□□□□ -2.46
Scn11aQ9R053 Defa-ps12-201ENSMUST00000122353 193 ntBASIC-0.33□□□□□ -2.46
Scn11aQ9R053 Gm16373-201ENSMUST00000129517 303 ntBASIC-0.33□□□□□ -2.46
Scn11aQ9R053 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.33□□□□□ -2.46
Scn11aQ9R053 Gm28666-201ENSMUST00000186649 274 ntBASIC-0.33□□□□□ -2.46
Scn11aQ9R053 Gm29350-201ENSMUST00000189141 541 ntBASIC-0.33□□□□□ -2.46
Scn11aQ9R053 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC-0.33□□□□□ -2.46
Scn11aQ9R053 AC104832.1-201ENSMUST00000222938 550 ntBASIC-0.33□□□□□ -2.46
Scn11aQ9R053 Gm13378-201ENSMUST00000117483 336 ntBASIC-0.34□□□□□ -2.46
Scn11aQ9R053 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.34□□□□□ -2.46
Scn11aQ9R053 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.34□□□□□ -2.46
Scn11aQ9R053 Gm15508-201ENSMUST00000160330 325 ntBASIC-0.34□□□□□ -2.46
Scn11aQ9R053 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC-0.34□□□□□ -2.46
Scn11aQ9R053 Gm24388-201ENSMUST00000177872 107 ntBASIC-0.34□□□□□ -2.46
Scn11aQ9R053 Mir6370-201ENSMUST00000183510 120 ntBASIC-0.34□□□□□ -2.46
Scn11aQ9R053 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.34□□□□□ -2.46
Scn11aQ9R053 Gm15102-201ENSMUST00000118740 1502 ntBASIC-0.34□□□□□ -2.46
Scn11aQ9R053 Gm15101-201ENSMUST00000178818 1502 ntBASIC-0.34□□□□□ -2.46
Scn11aQ9R053 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC-0.34□□□□□ -2.46
Scn11aQ9R053 Gm25047-201ENSMUST00000122667 104 ntBASIC-0.34□□□□□ -2.46
Scn11aQ9R053 Gm25283-201ENSMUST00000157272 77 ntBASIC-0.34□□□□□ -2.46
Scn11aQ9R053 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.34□□□□□ -2.46
Scn11aQ9R053 Gm23090-201ENSMUST00000177331 78 ntBASIC-0.34□□□□□ -2.46
Scn11aQ9R053 Mir3068-202ENSMUST00000197755 79 ntBASIC-0.34□□□□□ -2.46
Scn11aQ9R053 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC-0.34□□□□□ -2.46
Scn11aQ9R053 Snord85-201ENSMUST00000083262 73 ntBASIC-0.34□□□□□ -2.46
Scn11aQ9R053 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-0.35□□□□□ -2.47
Scn11aQ9R053 Gm14937-201ENSMUST00000119709 208 ntBASIC-0.35□□□□□ -2.47
Scn11aQ9R053 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.35□□□□□ -2.47
Scn11aQ9R053 Gm25643-201ENSMUST00000158874 103 ntBASIC-0.35□□□□□ -2.47
Scn11aQ9R053 Gm16539-201ENSMUST00000160086 327 ntBASIC-0.35□□□□□ -2.47
Scn11aQ9R053 Gm20438-201ENSMUST00000174441 329 ntBASIC-0.35□□□□□ -2.47
Scn11aQ9R053 Gm27522-201ENSMUST00000183949 230 ntBASIC-0.35□□□□□ -2.47
Scn11aQ9R053 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC-0.35□□□□□ -2.47
Scn11aQ9R053 Gm37693-201ENSMUST00000194562 234 ntBASIC-0.35□□□□□ -2.47
Scn11aQ9R053 Gm3702-201ENSMUST00000211754 346 ntBASIC-0.35□□□□□ -2.47
Scn11aQ9R053 Gm24917-201ENSMUST00000083935 104 ntBASIC-0.35□□□□□ -2.47
Scn11aQ9R053 Gm14269-201ENSMUST00000120455 306 ntBASIC-0.36□□□□□ -2.47
Scn11aQ9R053 Gm25012-201ENSMUST00000158396 164 ntBASIC-0.36□□□□□ -2.47
Scn11aQ9R053 Gm23473-201ENSMUST00000158883 116 ntBASIC-0.36□□□□□ -2.47
Scn11aQ9R053 Gm23777-201ENSMUST00000158994 259 ntBASIC-0.36□□□□□ -2.47
Scn11aQ9R053 Gm21758-201ENSMUST00000179336 819 ntBASIC-0.36□□□□□ -2.47
Scn11aQ9R053 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.36□□□□□ -2.47
Scn11aQ9R053 Gm9156-201ENSMUST00000189660 463 ntBASIC-0.36□□□□□ -2.47
Scn11aQ9R053 Gm19855-201ENSMUST00000210145 249 ntBASIC-0.36□□□□□ -2.47
Scn11aQ9R053 Gm22091-201ENSMUST00000116908 127 ntBASIC-0.37□□□□□ -2.47
Scn11aQ9R053 n-R5s6-201ENSMUST00000122663 88 ntBASIC-0.37□□□□□ -2.47
Scn11aQ9R053 Gm25637-201ENSMUST00000157529 107 ntBASIC-0.37□□□□□ -2.47
Scn11aQ9R053 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.37□□□□□ -2.47
Scn11aQ9R053 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC-0.37□□□□□ -2.47
Scn11aQ9R053 Gm23633-201ENSMUST00000175293 119 ntBASIC-0.37□□□□□ -2.47
Scn11aQ9R053 Mir8106-201ENSMUST00000184520 139 ntBASIC-0.37□□□□□ -2.47
Scn11aQ9R053 Gm44488-201ENSMUST00000199467 119 ntBASIC-0.37□□□□□ -2.47
Scn11aQ9R053 Gm44396-201ENSMUST00000199843 114 ntBASIC-0.37□□□□□ -2.47
Scn11aQ9R053 AC162387.1-201ENSMUST00000213369 213 ntBASIC-0.37□□□□□ -2.47
Scn11aQ9R053 AC162931.1-201ENSMUST00000214184 267 ntBASIC-0.37□□□□□ -2.47
Scn11aQ9R053 Gm19572-201ENSMUST00000214326 338 ntBASIC-0.37□□□□□ -2.47
Scn11aQ9R053 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC-0.37□□□□□ -2.47
Scn11aQ9R053 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.37□□□□□ -2.47
Scn11aQ9R053 Gm14713-201ENSMUST00000122362 686 ntBASIC-0.37□□□□□ -2.47
Scn11aQ9R053 Gm18415-201ENSMUST00000177464 647 ntBASIC-0.37□□□□□ -2.47
Scn11aQ9R053 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC-0.37□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 137.2 ms