Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.55□□□□□ -2
Shroom3Q9QXN0 Snord14c-201ENSMUST00000101927 86 ntBASIC2.55□□□□□ -2
Shroom3Q9QXN0 Gm14803-201ENSMUST00000117163 361 ntBASIC2.55□□□□□ -2
Shroom3Q9QXN0 Gm25805-201ENSMUST00000122788 108 ntBASIC2.55□□□□□ -2
Shroom3Q9QXN0 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC2.55□□□□□ -2
Shroom3Q9QXN0 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC2.55□□□□□ -2
Shroom3Q9QXN0 Gm23331-201ENSMUST00000157423 108 ntBASIC2.55□□□□□ -2
Shroom3Q9QXN0 Gm26171-201ENSMUST00000158422 131 ntBASIC2.55□□□□□ -2
Shroom3Q9QXN0 Gm23702-201ENSMUST00000158840 130 ntBASIC2.55□□□□□ -2
Shroom3Q9QXN0 Mir6383-201ENSMUST00000184545 116 ntBASIC2.55□□□□□ -2
Shroom3Q9QXN0 AC150901.1-201ENSMUST00000208407 145 ntBASIC2.55□□□□□ -2
Shroom3Q9QXN0 AC157476.1-201ENSMUST00000215555 169 ntBASIC2.55□□□□□ -2
Shroom3Q9QXN0 Gm18346-201ENSMUST00000216782 325 ntBASIC2.55□□□□□ -2
Shroom3Q9QXN0 AC122320.1-201ENSMUST00000227233 105 ntBASIC2.55□□□□□ -2
Shroom3Q9QXN0 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.55□□□□□ -2
Shroom3Q9QXN0 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.55□□□□□ -2
Shroom3Q9QXN0 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.55□□□□□ -2
Shroom3Q9QXN0 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.54□□□□□ -2
Shroom3Q9QXN0 Gm25421-201ENSMUST00000104218 164 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 Gm14894-201ENSMUST00000117170 270 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 Gm13210-201ENSMUST00000121483 273 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 Gm15065-201ENSMUST00000121699 273 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 Gm37449-201ENSMUST00000193016 270 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 Gm18658-201ENSMUST00000195558 270 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 AC101945.1-201ENSMUST00000226734 466 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 Gm9174-201ENSMUST00000078149 255 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 Gm22622-201ENSMUST00000082870 129 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Shroom3Q9QXN0 Gm23472-201ENSMUST00000101806 191 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 Mir872-201ENSMUST00000104728 81 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 Mir1b-201ENSMUST00000117012 122 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 Gm26026-201ENSMUST00000122726 123 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 Gm22026-201ENSMUST00000122735 281 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 Gm24726-201ENSMUST00000158232 121 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 Gm24497-201ENSMUST00000177868 191 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 Mir378a-201ENSMUST00000198300 66 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 Gm20144-201ENSMUST00000203031 165 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC2.54□□□□□ -2
Shroom3Q9QXN0 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 Gm25813-201ENSMUST00000082748 191 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 Gm24148-201ENSMUST00000082762 80 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 Gm23444-201ENSMUST00000082922 191 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 Gm26495-201ENSMUST00000083152 137 ntBASIC2.54□□□□□ -2
Shroom3Q9QXN0 Gm23766-201ENSMUST00000103894 80 ntBASIC2.53□□□□□ -2
Shroom3Q9QXN0 Gm25783-201ENSMUST00000122525 190 ntBASIC2.53□□□□□ -2
Shroom3Q9QXN0 Mir7013-201ENSMUST00000183540 72 ntBASIC2.53□□□□□ -2
Shroom3Q9QXN0 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.53□□□□□ -2
Shroom3Q9QXN0 Gm7329-201ENSMUST00000185915 210 ntBASIC2.53□□□□□ -2
Shroom3Q9QXN0 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.53□□□□□ -2
Shroom3Q9QXN0 Mir465d-201ENSMUST00000196314 58 ntBASIC2.53□□□□□ -2
Shroom3Q9QXN0 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Shroom3Q9QXN0 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.53□□□□□ -2
Shroom3Q9QXN0 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Shroom3Q9QXN0 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.53□□□□□ -2.01
Shroom3Q9QXN0 Gm24670-201ENSMUST00000104154 132 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Gm26341-201ENSMUST00000104561 134 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Gm11065-201ENSMUST00000111462 228 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Gm25985-201ENSMUST00000122677 107 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Gm23219-201ENSMUST00000158123 87 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Gm24212-201ENSMUST00000158258 132 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Gm23152-201ENSMUST00000175322 116 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Gm27399-201ENSMUST00000184250 78 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 CT485607.2-201ENSMUST00000214650 91 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Gm7065-201ENSMUST00000222150 474 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Gm24616-201ENSMUST00000083274 139 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Gm27220-201ENSMUST00000183453 262 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Gm27330-201ENSMUST00000184689 132 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Gm9377-201ENSMUST00000207227 623 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 AC098718.2-201ENSMUST00000226822 285 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Gm23454-201ENSMUST00000083332 133 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Gm23847-201ENSMUST00000083829 110 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Gm23039-201ENSMUST00000083870 161 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Gm26314-201ENSMUST00000083891 107 ntBASIC2.52□□□□□ -2.01
Shroom3Q9QXN0 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Shroom3Q9QXN0 Gm24132-201ENSMUST00000104745 91 ntBASIC2.51□□□□□ -2.01
Shroom3Q9QXN0 Gm13433-201ENSMUST00000121701 240 ntBASIC2.51□□□□□ -2.01
Shroom3Q9QXN0 Gm23713-201ENSMUST00000157353 70 ntBASIC2.51□□□□□ -2.01
Shroom3Q9QXN0 Gm22615-201ENSMUST00000158102 70 ntBASIC2.51□□□□□ -2.01
Shroom3Q9QXN0 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.51□□□□□ -2.01
Shroom3Q9QXN0 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Shroom3Q9QXN0 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Shroom3Q9QXN0 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms