Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.1□□□□□ -2.07
Cpsf3Q9QXK7 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Cpsf3Q9QXK7 Gm44010-201ENSMUST00000204432 331 ntBASIC2.1□□□□□ -2.07
Cpsf3Q9QXK7 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.1□□□□□ -2.07
Cpsf3Q9QXK7 AC122393.1-201ENSMUST00000226570 319 ntBASIC2.1□□□□□ -2.07
Cpsf3Q9QXK7 CT025602.1-201ENSMUST00000227281 382 ntBASIC2.1□□□□□ -2.07
Cpsf3Q9QXK7 Gm25788-201ENSMUST00000082721 131 ntBASIC2.1□□□□□ -2.07
Cpsf3Q9QXK7 Gm25124-201ENSMUST00000083345 164 ntBASIC2.1□□□□□ -2.07
Cpsf3Q9QXK7 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.1□□□□□ -2.07
Cpsf3Q9QXK7 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
Cpsf3Q9QXK7 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Cpsf3Q9QXK7 Gm22713-201ENSMUST00000116895 130 ntBASIC2.09□□□□□ -2.07
Cpsf3Q9QXK7 Gm14894-201ENSMUST00000117170 270 ntBASIC2.09□□□□□ -2.07
Cpsf3Q9QXK7 Gm6444-201ENSMUST00000119611 458 ntBASIC2.09□□□□□ -2.07
Cpsf3Q9QXK7 Gm13729-201ENSMUST00000120328 406 ntBASIC2.09□□□□□ -2.07
Cpsf3Q9QXK7 Gm24480-201ENSMUST00000157442 103 ntBASIC2.09□□□□□ -2.07
Cpsf3Q9QXK7 Gm24837-201ENSMUST00000158683 81 ntBASIC2.09□□□□□ -2.07
Cpsf3Q9QXK7 Gm24348-201ENSMUST00000158710 130 ntBASIC2.09□□□□□ -2.07
Cpsf3Q9QXK7 Gm27979-201ENSMUST00000185126 56 ntBASIC2.09□□□□□ -2.07
Cpsf3Q9QXK7 Gm28995-201ENSMUST00000186625 261 ntBASIC2.09□□□□□ -2.07
Cpsf3Q9QXK7 Gm37449-201ENSMUST00000193016 270 ntBASIC2.09□□□□□ -2.07
Cpsf3Q9QXK7 Gm18658-201ENSMUST00000195558 270 ntBASIC2.09□□□□□ -2.07
Cpsf3Q9QXK7 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.09□□□□□ -2.07
Cpsf3Q9QXK7 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.09□□□□□ -2.07
Cpsf3Q9QXK7 Gm44654-201ENSMUST00000208052 329 ntBASIC2.09□□□□□ -2.07
Cpsf3Q9QXK7 AC138290.2-201ENSMUST00000218822 369 ntBASIC2.09□□□□□ -2.07
Cpsf3Q9QXK7 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.09□□□□□ -2.07
Cpsf3Q9QXK7 AC122905.2-201ENSMUST00000220325 269 ntBASIC2.09□□□□□ -2.07
Cpsf3Q9QXK7 AC116589.4-201ENSMUST00000222390 216 ntBASIC2.09□□□□□ -2.07
Cpsf3Q9QXK7 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Cpsf3Q9QXK7 Gm25937-201ENSMUST00000083912 107 ntBASIC2.09□□□□□ -2.07
Cpsf3Q9QXK7 Mir759-201ENSMUST00000103254 98 ntBASIC2.08□□□□□ -2.08
Cpsf3Q9QXK7 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Cpsf3Q9QXK7 Gm12785-201ENSMUST00000122052 172 ntBASIC2.08□□□□□ -2.08
Cpsf3Q9QXK7 Gm23779-201ENSMUST00000157938 64 ntBASIC2.08□□□□□ -2.08
Cpsf3Q9QXK7 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.08□□□□□ -2.08
Cpsf3Q9QXK7 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Cpsf3Q9QXK7 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Cpsf3Q9QXK7 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Cpsf3Q9QXK7 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Cpsf3Q9QXK7 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Cpsf3Q9QXK7 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Cpsf3Q9QXK7 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Cpsf3Q9QXK7 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Cpsf3Q9QXK7 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Cpsf3Q9QXK7 Mir7050-201ENSMUST00000184636 60 ntBASIC2.08□□□□□ -2.08
Cpsf3Q9QXK7 Gm37313-201ENSMUST00000191673 290 ntBASIC2.08□□□□□ -2.08
Cpsf3Q9QXK7 Gm34015-201ENSMUST00000194908 451 ntBASIC2.08□□□□□ -2.08
Cpsf3Q9QXK7 Gm44482-201ENSMUST00000199232 103 ntBASIC2.08□□□□□ -2.08
Cpsf3Q9QXK7 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.08□□□□□ -2.08
Cpsf3Q9QXK7 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.08□□□□□ -2.08
Cpsf3Q9QXK7 Gm23950-201ENSMUST00000104026 129 ntBASIC2.07□□□□□ -2.08
Cpsf3Q9QXK7 Mir872-201ENSMUST00000104728 81 ntBASIC2.07□□□□□ -2.08
Cpsf3Q9QXK7 Mir669d-2-201ENSMUST00000116854 86 ntBASIC2.07□□□□□ -2.08
Cpsf3Q9QXK7 Gm14803-201ENSMUST00000117163 361 ntBASIC2.07□□□□□ -2.08
Cpsf3Q9QXK7 Gm12235-201ENSMUST00000118596 170 ntBASIC2.07□□□□□ -2.08
Cpsf3Q9QXK7 Gm14307-201ENSMUST00000118930 291 ntBASIC2.07□□□□□ -2.08
Cpsf3Q9QXK7 Gm11254-201ENSMUST00000122368 653 ntBASIC2.07□□□□□ -2.08
Cpsf3Q9QXK7 Gm24896-201ENSMUST00000122741 135 ntBASIC2.07□□□□□ -2.08
Cpsf3Q9QXK7 Gm14297-201ENSMUST00000129110 291 ntBASIC2.07□□□□□ -2.08
Cpsf3Q9QXK7 Gm16362-201ENSMUST00000135189 214 ntBASIC2.07□□□□□ -2.08
Cpsf3Q9QXK7 Gm16358-201ENSMUST00000146046 210 ntBASIC2.07□□□□□ -2.08
Cpsf3Q9QXK7 Gm24724-201ENSMUST00000158230 107 ntBASIC2.07□□□□□ -2.08
Cpsf3Q9QXK7 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.07□□□□□ -2.08
Cpsf3Q9QXK7 Gm28661-201ENSMUST00000188231 681 ntBASIC2.07□□□□□ -2.08
Cpsf3Q9QXK7 Gm42807-201ENSMUST00000200141 329 ntBASIC2.07□□□□□ -2.08
Cpsf3Q9QXK7 Gm44666-201ENSMUST00000208544 391 ntBASIC2.07□□□□□ -2.08
Cpsf3Q9QXK7 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Cpsf3Q9QXK7 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.07□□□□□ -2.08
Cpsf3Q9QXK7 AC151833.1-201ENSMUST00000227752 574 ntBASIC2.07□□□□□ -2.08
Cpsf3Q9QXK7 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Cpsf3Q9QXK7 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.07□□□□□ -2.08
Cpsf3Q9QXK7 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Cpsf3Q9QXK7 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
Cpsf3Q9QXK7 Gm23987-201ENSMUST00000117039 129 ntBASIC2.06□□□□□ -2.08
Cpsf3Q9QXK7 Gm11935-201ENSMUST00000118608 399 ntBASIC2.06□□□□□ -2.08
Cpsf3Q9QXK7 Gm25781-201ENSMUST00000122527 84 ntBASIC2.06□□□□□ -2.08
Cpsf3Q9QXK7 Gm23469-201ENSMUST00000157131 104 ntBASIC2.06□□□□□ -2.08
Cpsf3Q9QXK7 Gm22491-201ENSMUST00000157190 102 ntBASIC2.06□□□□□ -2.08
Cpsf3Q9QXK7 Mir28b-201ENSMUST00000175399 80 ntBASIC2.06□□□□□ -2.08
Cpsf3Q9QXK7 Gm22263-201ENSMUST00000180060 104 ntBASIC2.06□□□□□ -2.08
Cpsf3Q9QXK7 Gm25284-201ENSMUST00000180345 141 ntBASIC2.06□□□□□ -2.08
Cpsf3Q9QXK7 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.06□□□□□ -2.08
Cpsf3Q9QXK7 Gm25820-202ENSMUST00000197479 128 ntBASIC2.06□□□□□ -2.08
Cpsf3Q9QXK7 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.06□□□□□ -2.08
Cpsf3Q9QXK7 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.06□□□□□ -2.08
Cpsf3Q9QXK7 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.06□□□□□ -2.08
Cpsf3Q9QXK7 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.06□□□□□ -2.08
Cpsf3Q9QXK7 Gm25402-201ENSMUST00000082966 131 ntBASIC2.06□□□□□ -2.08
Cpsf3Q9QXK7 Gm26329-201ENSMUST00000093723 110 ntBASIC2.06□□□□□ -2.08
Cpsf3Q9QXK7 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Cpsf3Q9QXK7 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Cpsf3Q9QXK7 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC2.05□□□□□ -2.08
Cpsf3Q9QXK7 Gm22803-201ENSMUST00000158049 283 ntBASIC2.05□□□□□ -2.08
Cpsf3Q9QXK7 Gm23262-201ENSMUST00000158323 168 ntBASIC2.05□□□□□ -2.08
Cpsf3Q9QXK7 Gm25658-201ENSMUST00000158472 128 ntBASIC2.05□□□□□ -2.08
Cpsf3Q9QXK7 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.05□□□□□ -2.08
Cpsf3Q9QXK7 Gm28418-201ENSMUST00000186179 423 ntBASIC2.05□□□□□ -2.08
Cpsf3Q9QXK7 Gm28058-201ENSMUST00000186421 264 ntBASIC2.05□□□□□ -2.08
Cpsf3Q9QXK7 Gm28288-201ENSMUST00000191019 214 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 146.8 ms