Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm29005-201ENSMUST00000186773 320 ntBASIC1.21□□□□□ -2.22
Trem1Q9JKE2 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.21□□□□□ -2.22
Trem1Q9JKE2 Gm46997-201ENSMUST00000222108 217 ntBASIC1.21□□□□□ -2.22
Trem1Q9JKE2 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.21□□□□□ -2.22
Trem1Q9JKE2 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.21□□□□□ -2.22
Trem1Q9JKE2 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.2□□□□□ -2.22
Trem1Q9JKE2 Mir544-201ENSMUST00000103813 78 ntBASIC1.2□□□□□ -2.22
Trem1Q9JKE2 Gm11862-201ENSMUST00000119678 659 ntBASIC1.2□□□□□ -2.22
Trem1Q9JKE2 Gm15529-201ENSMUST00000121833 994 ntBASIC1.2□□□□□ -2.22
Trem1Q9JKE2 Mir1904-201ENSMUST00000122702 80 ntBASIC1.2□□□□□ -2.22
Trem1Q9JKE2 Gm24632-201ENSMUST00000122770 323 ntBASIC1.2□□□□□ -2.22
Trem1Q9JKE2 Gm24191-201ENSMUST00000157977 122 ntBASIC1.2□□□□□ -2.22
Trem1Q9JKE2 Gm23411-201ENSMUST00000157988 62 ntBASIC1.2□□□□□ -2.22
Trem1Q9JKE2 Gm22485-201ENSMUST00000157990 109 ntBASIC1.2□□□□□ -2.22
Trem1Q9JKE2 Gm26363-201ENSMUST00000158866 83 ntBASIC1.2□□□□□ -2.22
Trem1Q9JKE2 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.2□□□□□ -2.22
Trem1Q9JKE2 AL772265.1-201ENSMUST00000214379 305 ntBASIC1.2□□□□□ -2.22
Trem1Q9JKE2 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Trem1Q9JKE2 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.2□□□□□ -2.22
Trem1Q9JKE2 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.2□□□□□ -2.22
Trem1Q9JKE2 Gm24625-201ENSMUST00000082622 130 ntBASIC1.2□□□□□ -2.22
Trem1Q9JKE2 Snord1a-201ENSMUST00000083160 74 ntBASIC1.2□□□□□ -2.22
Trem1Q9JKE2 Gm25128-201ENSMUST00000083339 76 ntBASIC1.2□□□□□ -2.22
Trem1Q9JKE2 Mir320-201ENSMUST00000083594 82 ntBASIC1.2□□□□□ -2.22
Trem1Q9JKE2 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.2□□□□□ -2.22
Trem1Q9JKE2 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Trem1Q9JKE2 Gm25376-201ENSMUST00000104340 133 ntBASIC1.19□□□□□ -2.22
Trem1Q9JKE2 Gm12255-201ENSMUST00000117184 284 ntBASIC1.19□□□□□ -2.22
Trem1Q9JKE2 Gm9059-201ENSMUST00000118319 183 ntBASIC1.19□□□□□ -2.22
Trem1Q9JKE2 Gm11512-201ENSMUST00000119669 663 ntBASIC1.19□□□□□ -2.22
Trem1Q9JKE2 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.19□□□□□ -2.22
Trem1Q9JKE2 Mir669n-201ENSMUST00000158636 54 ntBASIC1.19□□□□□ -2.22
Trem1Q9JKE2 Gm25163-201ENSMUST00000158905 104 ntBASIC1.19□□□□□ -2.22
Trem1Q9JKE2 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC1.19□□□□□ -2.22
Trem1Q9JKE2 Gm26435-201ENSMUST00000179026 107 ntBASIC1.19□□□□□ -2.22
Trem1Q9JKE2 Trbv22-201ENSMUST00000191697 291 ntBASIC1.19□□□□□ -2.22
Trem1Q9JKE2 Gm45878-201ENSMUST00000211839 241 ntBASIC1.19□□□□□ -2.22
Trem1Q9JKE2 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.19□□□□□ -2.22
Trem1Q9JKE2 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.19□□□□□ -2.22
Trem1Q9JKE2 AC192616.1-201ENSMUST00000221922 132 ntBASIC1.19□□□□□ -2.22
Trem1Q9JKE2 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Trem1Q9JKE2 Gm25357-201ENSMUST00000082745 72 ntBASIC1.19□□□□□ -2.22
Trem1Q9JKE2 Gm24494-201ENSMUST00000083804 81 ntBASIC1.19□□□□□ -2.22
Trem1Q9JKE2 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Trem1Q9JKE2 Mir293-201ENSMUST00000104841 80 ntBASIC1.18□□□□□ -2.22
Trem1Q9JKE2 Gm13439-201ENSMUST00000117541 409 ntBASIC1.18□□□□□ -2.22
Trem1Q9JKE2 Gm13396-201ENSMUST00000120617 271 ntBASIC1.18□□□□□ -2.22
Trem1Q9JKE2 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Trem1Q9JKE2 Mir7081-201ENSMUST00000184490 75 ntBASIC1.18□□□□□ -2.22
Trem1Q9JKE2 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.18□□□□□ -2.22
Trem1Q9JKE2 Gm37089-201ENSMUST00000195616 129 ntBASIC1.18□□□□□ -2.22
Trem1Q9JKE2 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.18□□□□□ -2.22
Trem1Q9JKE2 Gm18696-201ENSMUST00000220103 274 ntBASIC1.18□□□□□ -2.22
Trem1Q9JKE2 Snord68-201ENSMUST00000082516 86 ntBASIC1.18□□□□□ -2.22
Trem1Q9JKE2 Mir148b-201ENSMUST00000083626 97 ntBASIC1.18□□□□□ -2.22
Trem1Q9JKE2 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Trem1Q9JKE2 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.18□□□□□ -2.22
Trem1Q9JKE2 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Trem1Q9JKE2 Gm22785-201ENSMUST00000104087 132 ntBASIC1.17□□□□□ -2.22
Trem1Q9JKE2 Gm23212-201ENSMUST00000122718 60 ntBASIC1.17□□□□□ -2.22
Trem1Q9JKE2 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.17□□□□□ -2.22
Trem1Q9JKE2 Gm24777-201ENSMUST00000157644 107 ntBASIC1.17□□□□□ -2.22
Trem1Q9JKE2 Gm26213-201ENSMUST00000158582 110 ntBASIC1.17□□□□□ -2.22
Trem1Q9JKE2 Gm22929-201ENSMUST00000175517 107 ntBASIC1.17□□□□□ -2.22
Trem1Q9JKE2 Gm26200-201ENSMUST00000180273 79 ntBASIC1.17□□□□□ -2.22
Trem1Q9JKE2 Mir7068-201ENSMUST00000183439 74 ntBASIC1.17□□□□□ -2.22
Trem1Q9JKE2 Gm28506-201ENSMUST00000189937 150 ntBASIC1.17□□□□□ -2.22
Trem1Q9JKE2 Gm37693-201ENSMUST00000194562 234 ntBASIC1.17□□□□□ -2.22
Trem1Q9JKE2 Gm5034-201ENSMUST00000199115 634 ntBASIC1.17□□□□□ -2.22
Trem1Q9JKE2 Gm43199-201ENSMUST00000200019 307 ntBASIC1.17□□□□□ -2.22
Trem1Q9JKE2 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.17□□□□□ -2.22
Trem1Q9JKE2 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Trem1Q9JKE2 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.17□□□□□ -2.22
Trem1Q9JKE2 Gm12449-201ENSMUST00000117572 234 ntBASIC1.16□□□□□ -2.22
Trem1Q9JKE2 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC1.16□□□□□ -2.22
Trem1Q9JKE2 Gm14943-201ENSMUST00000118056 546 ntBASIC1.16□□□□□ -2.22
Trem1Q9JKE2 Gm14923-201ENSMUST00000118270 155 ntBASIC1.16□□□□□ -2.22
Trem1Q9JKE2 Gm6829-201ENSMUST00000119858 360 ntBASIC1.16□□□□□ -2.22
Trem1Q9JKE2 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC1.16□□□□□ -2.22
Trem1Q9JKE2 Mir378a-201ENSMUST00000198300 66 ntBASIC1.16□□□□□ -2.22
Trem1Q9JKE2 AC162387.1-201ENSMUST00000213369 213 ntBASIC1.16□□□□□ -2.22
Trem1Q9JKE2 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.16□□□□□ -2.22
Trem1Q9JKE2 AC112972.1-201ENSMUST00000227329 365 ntBASIC1.16□□□□□ -2.22
Trem1Q9JKE2 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Trem1Q9JKE2 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.16□□□□□ -2.22
Trem1Q9JKE2 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Trem1Q9JKE2 Gm26074-201ENSMUST00000104063 129 ntBASIC1.15□□□□□ -2.23
Trem1Q9JKE2 Gm12309-201ENSMUST00000119889 182 ntBASIC1.15□□□□□ -2.23
Trem1Q9JKE2 Gm25102-201ENSMUST00000122479 112 ntBASIC1.15□□□□□ -2.23
Trem1Q9JKE2 Gm24858-201ENSMUST00000158058 323 ntBASIC1.15□□□□□ -2.23
Trem1Q9JKE2 Mir5118-201ENSMUST00000175551 67 ntBASIC1.15□□□□□ -2.23
Trem1Q9JKE2 Gm45150-201ENSMUST00000206051 467 ntBASIC1.15□□□□□ -2.23
Trem1Q9JKE2 Gm5010-201ENSMUST00000213131 260 ntBASIC1.15□□□□□ -2.23
Trem1Q9JKE2 AC120394.1-201ENSMUST00000217153 351 ntBASIC1.15□□□□□ -2.23
Trem1Q9JKE2 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.15□□□□□ -2.23
Trem1Q9JKE2 AC116589.9-201ENSMUST00000221462 908 ntBASIC1.15□□□□□ -2.23
Trem1Q9JKE2 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Trem1Q9JKE2 Gm14766-201ENSMUST00000121689 367 ntBASIC1.14□□□□□ -2.23
Trem1Q9JKE2 Gm11471-201ENSMUST00000121824 198 ntBASIC1.14□□□□□ -2.23
Trem1Q9JKE2 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms