Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm28956-201ENSMUST00000189047 427 ntBASIC0.46□□□□□ -2.34
Trem3Q9JKE1 Gm29490-201ENSMUST00000190923 342 ntBASIC0.46□□□□□ -2.34
Trem3Q9JKE1 Gm19901-201ENSMUST00000192191 495 ntBASIC0.46□□□□□ -2.34
Trem3Q9JKE1 Gm37709-201ENSMUST00000195074 600 ntBASIC0.46□□□□□ -2.34
Trem3Q9JKE1 Gm38395-201ENSMUST00000199904 830 ntBASIC0.46□□□□□ -2.34
Trem3Q9JKE1 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC0.46□□□□□ -2.34
Trem3Q9JKE1 AC167229.1-201ENSMUST00000220057 469 ntBASIC0.46□□□□□ -2.34
Trem3Q9JKE1 Gm6369-201ENSMUST00000069626 412 ntBASIC0.46□□□□□ -2.34
Trem3Q9JKE1 Gm25131-201ENSMUST00000082653 151 ntBASIC0.46□□□□□ -2.34
Trem3Q9JKE1 Gm26203-201ENSMUST00000082911 114 ntBASIC0.46□□□□□ -2.34
Trem3Q9JKE1 Gm24340-201ENSMUST00000104208 97 ntBASIC0.45□□□□□ -2.34
Trem3Q9JKE1 Gm12432-201ENSMUST00000119540 186 ntBASIC0.45□□□□□ -2.34
Trem3Q9JKE1 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.45□□□□□ -2.34
Trem3Q9JKE1 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.45□□□□□ -2.34
Trem3Q9JKE1 Gm15077-201ENSMUST00000122344 362 ntBASIC0.45□□□□□ -2.34
Trem3Q9JKE1 Gm14713-201ENSMUST00000122362 686 ntBASIC0.45□□□□□ -2.34
Trem3Q9JKE1 Gm16265-201ENSMUST00000134558 108 ntBASIC0.45□□□□□ -2.34
Trem3Q9JKE1 Gm25166-201ENSMUST00000158909 111 ntBASIC0.45□□□□□ -2.34
Trem3Q9JKE1 Gm2962-201ENSMUST00000159266 336 ntBASIC0.45□□□□□ -2.34
Trem3Q9JKE1 Gm17164-201ENSMUST00000169013 506 ntBASIC0.45□□□□□ -2.34
Trem3Q9JKE1 Gm24084-201ENSMUST00000175173 137 ntBASIC0.45□□□□□ -2.34
Trem3Q9JKE1 Gm26236-201ENSMUST00000175536 137 ntBASIC0.45□□□□□ -2.34
Trem3Q9JKE1 Gm18396-201ENSMUST00000177095 361 ntBASIC0.45□□□□□ -2.34
Trem3Q9JKE1 Gm29167-201ENSMUST00000190024 377 ntBASIC0.45□□□□□ -2.34
Trem3Q9JKE1 Gm37713-201ENSMUST00000191746 198 ntBASIC0.45□□□□□ -2.34
Trem3Q9JKE1 AL928567.1-201ENSMUST00000197891 138 ntBASIC0.45□□□□□ -2.34
Trem3Q9JKE1 Gm44449-201ENSMUST00000203610 153 ntBASIC0.45□□□□□ -2.34
Trem3Q9JKE1 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.45□□□□□ -2.34
Trem3Q9JKE1 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC0.45□□□□□ -2.34
Trem3Q9JKE1 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.45□□□□□ -2.34
Trem3Q9JKE1 Gm5899-201ENSMUST00000071770 270 ntBASIC0.45□□□□□ -2.34
Trem3Q9JKE1 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
Trem3Q9JKE1 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
Trem3Q9JKE1 Mir362-201ENSMUST00000093592 65 ntBASIC0.45□□□□□ -2.34
Trem3Q9JKE1 Gm24430-201ENSMUST00000104077 104 ntBASIC0.44□□□□□ -2.34
Trem3Q9JKE1 Gm25876-201ENSMUST00000104329 119 ntBASIC0.44□□□□□ -2.34
Trem3Q9JKE1 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC0.44□□□□□ -2.34
Trem3Q9JKE1 Gm25384-201ENSMUST00000157807 105 ntBASIC0.44□□□□□ -2.34
Trem3Q9JKE1 Gm26271-201ENSMUST00000158349 104 ntBASIC0.44□□□□□ -2.34
Trem3Q9JKE1 Gm23819-201ENSMUST00000158744 109 ntBASIC0.44□□□□□ -2.34
Trem3Q9JKE1 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.44□□□□□ -2.34
Trem3Q9JKE1 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
Trem3Q9JKE1 Gm24510-201ENSMUST00000174965 94 ntBASIC0.44□□□□□ -2.34
Trem3Q9JKE1 Gm16404-201ENSMUST00000177739 468 ntBASIC0.44□□□□□ -2.34
Trem3Q9JKE1 Gm7958-201ENSMUST00000178255 468 ntBASIC0.44□□□□□ -2.34
Trem3Q9JKE1 Gm7950-201ENSMUST00000179633 468 ntBASIC0.44□□□□□ -2.34
Trem3Q9JKE1 Gm14598-201ENSMUST00000180109 468 ntBASIC0.44□□□□□ -2.34
Trem3Q9JKE1 Gm14625-201ENSMUST00000180231 468 ntBASIC0.44□□□□□ -2.34
Trem3Q9JKE1 Gm44358-201ENSMUST00000196301 98 ntBASIC0.44□□□□□ -2.34
Trem3Q9JKE1 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.44□□□□□ -2.34
Trem3Q9JKE1 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC0.44□□□□□ -2.34
Trem3Q9JKE1 AC154506.3-201ENSMUST00000225417 213 ntBASIC0.44□□□□□ -2.34
Trem3Q9JKE1 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC0.44□□□□□ -2.34
Trem3Q9JKE1 Mir33-201ENSMUST00000083531 69 ntBASIC0.44□□□□□ -2.34
Trem3Q9JKE1 Gm14797-201ENSMUST00000119378 1480 ntBASIC0.43□□□□□ -2.34
Trem3Q9JKE1 Gm12102-201ENSMUST00000118251 604 ntBASIC0.43□□□□□ -2.34
Trem3Q9JKE1 Gm3788-201ENSMUST00000119949 136 ntBASIC0.43□□□□□ -2.34
Trem3Q9JKE1 Gm11792-201ENSMUST00000120640 168 ntBASIC0.43□□□□□ -2.34
Trem3Q9JKE1 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC0.43□□□□□ -2.34
Trem3Q9JKE1 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
Trem3Q9JKE1 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.43□□□□□ -2.34
Trem3Q9JKE1 Gm24311-201ENSMUST00000082570 104 ntBASIC0.43□□□□□ -2.34
Trem3Q9JKE1 Gm22302-201ENSMUST00000082657 106 ntBASIC0.43□□□□□ -2.34
Trem3Q9JKE1 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.43□□□□□ -2.34
Trem3Q9JKE1 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
Trem3Q9JKE1 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Gm9059-201ENSMUST00000118319 183 ntBASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Gm12507-201ENSMUST00000119155 415 ntBASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Gm23000-201ENSMUST00000157083 139 ntBASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Gm20874-201ENSMUST00000178356 663 ntBASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Gm25670-201ENSMUST00000178423 107 ntBASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Gm26239-201ENSMUST00000178842 107 ntBASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Gm24267-201ENSMUST00000179841 107 ntBASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Gm24518-201ENSMUST00000180275 94 ntBASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Gm34015-201ENSMUST00000194908 451 ntBASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Gm43556-201ENSMUST00000196186 681 ntBASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Gm44396-201ENSMUST00000199843 114 ntBASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
Trem3Q9JKE1 AC157654.1-201ENSMUST00000224130 820 ntBASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Gm24624-201ENSMUST00000082617 164 ntBASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Gm22306-201ENSMUST00000082692 107 ntBASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Gm24292-201ENSMUST00000082888 107 ntBASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Snord33-201ENSMUST00000083694 84 ntBASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Gm25651-201ENSMUST00000083782 119 ntBASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC0.42□□□□□ -2.34
Trem3Q9JKE1 Gm23203-201ENSMUST00000104374 107 ntBASIC0.41□□□□□ -2.34
Trem3Q9JKE1 Gm6829-201ENSMUST00000119858 360 ntBASIC0.41□□□□□ -2.34
Trem3Q9JKE1 Gm13967-201ENSMUST00000120404 380 ntBASIC0.41□□□□□ -2.34
Trem3Q9JKE1 Gm24385-201ENSMUST00000122694 350 ntBASIC0.41□□□□□ -2.34
Trem3Q9JKE1 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
Trem3Q9JKE1 Gm22228-201ENSMUST00000157364 101 ntBASIC0.41□□□□□ -2.34
Trem3Q9JKE1 Gm23355-201ENSMUST00000177614 107 ntBASIC0.41□□□□□ -2.34
Trem3Q9JKE1 Mir7062-201ENSMUST00000185038 66 ntBASIC0.41□□□□□ -2.34
Trem3Q9JKE1 Gm29022-201ENSMUST00000190702 225 ntBASIC0.41□□□□□ -2.34
Trem3Q9JKE1 Gm44337-201ENSMUST00000196553 114 ntBASIC0.41□□□□□ -2.34
Trem3Q9JKE1 Gm42855-201ENSMUST00000197388 253 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms