Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Gm6801-201ENSMUST00000190697 339 ntBASIC2.67□□□□□ -1.98
Copb1Q9JIF7 Gm2077-201ENSMUST00000195017 319 ntBASIC2.67□□□□□ -1.98
Copb1Q9JIF7 Gm43722-201ENSMUST00000196054 124 ntBASIC2.67□□□□□ -1.98
Copb1Q9JIF7 Gm42672-201ENSMUST00000197821 352 ntBASIC2.67□□□□□ -1.98
Copb1Q9JIF7 Gm42578-201ENSMUST00000199960 194 ntBASIC2.67□□□□□ -1.98
Copb1Q9JIF7 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.67□□□□□ -1.98
Copb1Q9JIF7 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Copb1Q9JIF7 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Copb1Q9JIF7 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2.66□□□□□ -1.98
Copb1Q9JIF7 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.66□□□□□ -1.98
Copb1Q9JIF7 Mir542-201ENSMUST00000102186 85 ntBASIC2.66□□□□□ -1.98
Copb1Q9JIF7 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.66□□□□□ -1.98
Copb1Q9JIF7 Gm25945-201ENSMUST00000122484 135 ntBASIC2.66□□□□□ -1.98
Copb1Q9JIF7 n-R5s87-201ENSMUST00000122752 116 ntBASIC2.66□□□□□ -1.98
Copb1Q9JIF7 Gm26287-201ENSMUST00000158887 81 ntBASIC2.66□□□□□ -1.98
Copb1Q9JIF7 Gm25749-201ENSMUST00000175485 111 ntBASIC2.66□□□□□ -1.98
Copb1Q9JIF7 Gm23933-201ENSMUST00000178405 79 ntBASIC2.66□□□□□ -1.98
Copb1Q9JIF7 Gm44476-201ENSMUST00000196225 91 ntBASIC2.66□□□□□ -1.98
Copb1Q9JIF7 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.66□□□□□ -1.98
Copb1Q9JIF7 Gm9174-201ENSMUST00000078149 255 ntBASIC2.66□□□□□ -1.98
Copb1Q9JIF7 Gm22294-201ENSMUST00000083308 104 ntBASIC2.66□□□□□ -1.98
Copb1Q9JIF7 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
Copb1Q9JIF7 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.65□□□□□ -1.98
Copb1Q9JIF7 Gm24423-201ENSMUST00000101982 106 ntBASIC2.65□□□□□ -1.99
Copb1Q9JIF7 Gm14846-201ENSMUST00000121868 216 ntBASIC2.65□□□□□ -1.99
Copb1Q9JIF7 Gm24475-201ENSMUST00000157435 143 ntBASIC2.65□□□□□ -1.99
Copb1Q9JIF7 Gm27396-201ENSMUST00000157708 58 ntBASIC2.65□□□□□ -1.99
Copb1Q9JIF7 Gm23640-201ENSMUST00000157860 104 ntBASIC2.65□□□□□ -1.99
Copb1Q9JIF7 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Copb1Q9JIF7 Gm23963-201ENSMUST00000179603 77 ntBASIC2.65□□□□□ -1.99
Copb1Q9JIF7 Mir7013-201ENSMUST00000183540 72 ntBASIC2.65□□□□□ -1.99
Copb1Q9JIF7 Gm27545-201ENSMUST00000184755 202 ntBASIC2.65□□□□□ -1.99
Copb1Q9JIF7 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Copb1Q9JIF7 Gm42739-201ENSMUST00000200687 226 ntBASIC2.65□□□□□ -1.99
Copb1Q9JIF7 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC2.65□□□□□ -1.99
Copb1Q9JIF7 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC2.65□□□□□ -1.99
Copb1Q9JIF7 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.65□□□□□ -1.99
Copb1Q9JIF7 Gm23247-201ENSMUST00000083373 107 ntBASIC2.65□□□□□ -1.99
Copb1Q9JIF7 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.65□□□□□ -1.99
Copb1Q9JIF7 Gm25628-201ENSMUST00000084002 105 ntBASIC2.65□□□□□ -1.99
Copb1Q9JIF7 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Copb1Q9JIF7 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.64□□□□□ -1.99
Copb1Q9JIF7 Gm22750-201ENSMUST00000102076 103 ntBASIC2.64□□□□□ -1.99
Copb1Q9JIF7 Gm22658-201ENSMUST00000104196 155 ntBASIC2.64□□□□□ -1.99
Copb1Q9JIF7 Gm22486-201ENSMUST00000116815 137 ntBASIC2.64□□□□□ -1.99
Copb1Q9JIF7 Mir1b-201ENSMUST00000117012 122 ntBASIC2.64□□□□□ -1.99
Copb1Q9JIF7 Gm25664-201ENSMUST00000157697 107 ntBASIC2.64□□□□□ -1.99
Copb1Q9JIF7 Gm22500-201ENSMUST00000158982 99 ntBASIC2.64□□□□□ -1.99
Copb1Q9JIF7 Gm22118-201ENSMUST00000175593 171 ntBASIC2.64□□□□□ -1.99
Copb1Q9JIF7 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.64□□□□□ -1.99
Copb1Q9JIF7 Gm44429-201ENSMUST00000203542 186 ntBASIC2.64□□□□□ -1.99
Copb1Q9JIF7 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Copb1Q9JIF7 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.64□□□□□ -1.99
Copb1Q9JIF7 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Copb1Q9JIF7 Gm23705-201ENSMUST00000104370 130 ntBASIC2.63□□□□□ -1.99
Copb1Q9JIF7 Gm24640-201ENSMUST00000116949 126 ntBASIC2.63□□□□□ -1.99
Copb1Q9JIF7 Gm22626-201ENSMUST00000116990 126 ntBASIC2.63□□□□□ -1.99
Copb1Q9JIF7 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.63□□□□□ -1.99
Copb1Q9JIF7 Gm22027-201ENSMUST00000122737 127 ntBASIC2.63□□□□□ -1.99
Copb1Q9JIF7 Gm23901-201ENSMUST00000157570 107 ntBASIC2.63□□□□□ -1.99
Copb1Q9JIF7 Gm22537-201ENSMUST00000158172 199 ntBASIC2.63□□□□□ -1.99
Copb1Q9JIF7 Gm24816-201ENSMUST00000175311 151 ntBASIC2.63□□□□□ -1.99
Copb1Q9JIF7 Gm20660-201ENSMUST00000177515 289 ntBASIC2.63□□□□□ -1.99
Copb1Q9JIF7 Gm24761-201ENSMUST00000179589 127 ntBASIC2.63□□□□□ -1.99
Copb1Q9JIF7 Gm24488-201ENSMUST00000179934 127 ntBASIC2.63□□□□□ -1.99
Copb1Q9JIF7 Gm25701-201ENSMUST00000179988 127 ntBASIC2.63□□□□□ -1.99
Copb1Q9JIF7 Gm26431-201ENSMUST00000180199 127 ntBASIC2.63□□□□□ -1.99
Copb1Q9JIF7 Gm27582-201ENSMUST00000184084 126 ntBASIC2.63□□□□□ -1.99
Copb1Q9JIF7 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.63□□□□□ -1.99
Copb1Q9JIF7 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.63□□□□□ -1.99
Copb1Q9JIF7 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.63□□□□□ -1.99
Copb1Q9JIF7 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Copb1Q9JIF7 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.63□□□□□ -1.99
Copb1Q9JIF7 Gm26249-201ENSMUST00000116708 118 ntBASIC2.62□□□□□ -1.99
Copb1Q9JIF7 Gm6574-201ENSMUST00000120037 362 ntBASIC2.62□□□□□ -1.99
Copb1Q9JIF7 Gm12771-201ENSMUST00000120246 135 ntBASIC2.62□□□□□ -1.99
Copb1Q9JIF7 Gm23589-201ENSMUST00000157660 105 ntBASIC2.62□□□□□ -1.99
Copb1Q9JIF7 Gm22382-201ENSMUST00000158185 130 ntBASIC2.62□□□□□ -1.99
Copb1Q9JIF7 Gm22433-201ENSMUST00000158550 142 ntBASIC2.62□□□□□ -1.99
Copb1Q9JIF7 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.62□□□□□ -1.99
Copb1Q9JIF7 Mir3076-201ENSMUST00000175415 60 ntBASIC2.62□□□□□ -1.99
Copb1Q9JIF7 Gm27220-201ENSMUST00000183453 262 ntBASIC2.62□□□□□ -1.99
Copb1Q9JIF7 Mir465d-201ENSMUST00000196314 58 ntBASIC2.62□□□□□ -1.99
Copb1Q9JIF7 Gm7065-201ENSMUST00000222150 474 ntBASIC2.62□□□□□ -1.99
Copb1Q9JIF7 CT954323.1-201ENSMUST00000222774 229 ntBASIC2.62□□□□□ -1.99
Copb1Q9JIF7 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.62□□□□□ -1.99
Copb1Q9JIF7 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.62□□□□□ -1.99
Copb1Q9JIF7 Gm22978-201ENSMUST00000082607 160 ntBASIC2.62□□□□□ -1.99
Copb1Q9JIF7 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Copb1Q9JIF7 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Copb1Q9JIF7 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
Copb1Q9JIF7 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Copb1Q9JIF7 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.61□□□□□ -1.99
Copb1Q9JIF7 Mir682-201ENSMUST00000102281 96 ntBASIC2.61□□□□□ -1.99
Copb1Q9JIF7 Gm24116-201ENSMUST00000103975 107 ntBASIC2.61□□□□□ -1.99
Copb1Q9JIF7 Gm23836-201ENSMUST00000104434 129 ntBASIC2.61□□□□□ -1.99
Copb1Q9JIF7 Gm26247-201ENSMUST00000116702 91 ntBASIC2.61□□□□□ -1.99
Copb1Q9JIF7 Gm23841-201ENSMUST00000116951 114 ntBASIC2.61□□□□□ -1.99
Copb1Q9JIF7 Gm14073-201ENSMUST00000117344 381 ntBASIC2.61□□□□□ -1.99
Copb1Q9JIF7 Gm14652-201ENSMUST00000118479 235 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms