Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.57□□□□□ -2
Trim54Q9ERP3 Gm15102-201ENSMUST00000118740 1502 ntBASIC2.57□□□□□ -2
Trim54Q9ERP3 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.56□□□□□ -2
Trim54Q9ERP3 Gm24280-201ENSMUST00000104237 134 ntBASIC2.56□□□□□ -2
Trim54Q9ERP3 Mir344e-201ENSMUST00000104677 66 ntBASIC2.56□□□□□ -2
Trim54Q9ERP3 Gm25111-201ENSMUST00000116686 147 ntBASIC2.56□□□□□ -2
Trim54Q9ERP3 Gm22713-201ENSMUST00000116895 130 ntBASIC2.56□□□□□ -2
Trim54Q9ERP3 Gm15365-201ENSMUST00000122392 300 ntBASIC2.56□□□□□ -2
Trim54Q9ERP3 Gm22483-201ENSMUST00000157986 274 ntBASIC2.56□□□□□ -2
Trim54Q9ERP3 AC154552.1-201ENSMUST00000222969 202 ntBASIC2.56□□□□□ -2
Trim54Q9ERP3 Gm22978-201ENSMUST00000082607 160 ntBASIC2.56□□□□□ -2
Trim54Q9ERP3 Gm23055-201ENSMUST00000082805 94 ntBASIC2.56□□□□□ -2
Trim54Q9ERP3 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trim54Q9ERP3 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.56□□□□□ -2
Trim54Q9ERP3 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Trim54Q9ERP3 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.56□□□□□ -2
Trim54Q9ERP3 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.55□□□□□ -2
Trim54Q9ERP3 Gm13885-201ENSMUST00000117569 187 ntBASIC2.55□□□□□ -2
Trim54Q9ERP3 Gm13711-201ENSMUST00000119708 453 ntBASIC2.55□□□□□ -2
Trim54Q9ERP3 Gm13862-201ENSMUST00000121220 197 ntBASIC2.55□□□□□ -2
Trim54Q9ERP3 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.55□□□□□ -2
Trim54Q9ERP3 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC2.55□□□□□ -2
Trim54Q9ERP3 Gm24847-201ENSMUST00000158032 108 ntBASIC2.55□□□□□ -2
Trim54Q9ERP3 Gm23223-201ENSMUST00000158119 127 ntBASIC2.55□□□□□ -2
Trim54Q9ERP3 Snord11-201ENSMUST00000158468 84 ntBASIC2.55□□□□□ -2
Trim54Q9ERP3 Gm27753-201ENSMUST00000184742 203 ntBASIC2.55□□□□□ -2
Trim54Q9ERP3 Gm29167-201ENSMUST00000190024 377 ntBASIC2.55□□□□□ -2
Trim54Q9ERP3 Gm44555-201ENSMUST00000209008 148 ntBASIC2.55□□□□□ -2
Trim54Q9ERP3 Gm45522-201ENSMUST00000210784 166 ntBASIC2.55□□□□□ -2
Trim54Q9ERP3 Gm45616-201ENSMUST00000211711 319 ntBASIC2.55□□□□□ -2
Trim54Q9ERP3 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.55□□□□□ -2
Trim54Q9ERP3 Gm25078-201ENSMUST00000082530 107 ntBASIC2.55□□□□□ -2
Trim54Q9ERP3 Gm24316-201ENSMUST00000083041 107 ntBASIC2.55□□□□□ -2
Trim54Q9ERP3 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.55□□□□□ -2
Trim54Q9ERP3 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.54□□□□□ -2
Trim54Q9ERP3 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trim54Q9ERP3 Mir669d-201ENSMUST00000104644 121 ntBASIC2.54□□□□□ -2
Trim54Q9ERP3 Mir1b-201ENSMUST00000117012 122 ntBASIC2.54□□□□□ -2
Trim54Q9ERP3 Gm11572-201ENSMUST00000119164 120 ntBASIC2.54□□□□□ -2
Trim54Q9ERP3 Gm13992-201ENSMUST00000120558 156 ntBASIC2.54□□□□□ -2
Trim54Q9ERP3 Gm13433-201ENSMUST00000121701 240 ntBASIC2.54□□□□□ -2
Trim54Q9ERP3 Gm25805-201ENSMUST00000122788 108 ntBASIC2.54□□□□□ -2
Trim54Q9ERP3 Gm25888-201ENSMUST00000157778 302 ntBASIC2.54□□□□□ -2
Trim54Q9ERP3 Gm25488-201ENSMUST00000158728 118 ntBASIC2.54□□□□□ -2
Trim54Q9ERP3 Mir28b-201ENSMUST00000175399 80 ntBASIC2.54□□□□□ -2
Trim54Q9ERP3 Gm27332-201ENSMUST00000184893 112 ntBASIC2.54□□□□□ -2
Trim54Q9ERP3 Gm28058-201ENSMUST00000186421 264 ntBASIC2.54□□□□□ -2
Trim54Q9ERP3 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC2.54□□□□□ -2
Trim54Q9ERP3 Gm38019-201ENSMUST00000195133 380 ntBASIC2.54□□□□□ -2
Trim54Q9ERP3 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC2.54□□□□□ -2
Trim54Q9ERP3 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.54□□□□□ -2
Trim54Q9ERP3 AC170600.1-201ENSMUST00000228763 277 ntBASIC2.54□□□□□ -2
Trim54Q9ERP3 mt-Td-201ENSMUST00000082404 70 ntBASIC2.54□□□□□ -2
Trim54Q9ERP3 Gm25589-201ENSMUST00000082502 166 ntBASIC2.54□□□□□ -2
Trim54Q9ERP3 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trim54Q9ERP3 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
Trim54Q9ERP3 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.53□□□□□ -2
Trim54Q9ERP3 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.53□□□□□ -2
Trim54Q9ERP3 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trim54Q9ERP3 Gm15526-201ENSMUST00000112504 204 ntBASIC2.53□□□□□ -2
Trim54Q9ERP3 Gm14782-201ENSMUST00000120151 195 ntBASIC2.53□□□□□ -2
Trim54Q9ERP3 Gm25059-201ENSMUST00000157367 117 ntBASIC2.53□□□□□ -2
Trim54Q9ERP3 Gm25933-201ENSMUST00000178943 108 ntBASIC2.53□□□□□ -2
Trim54Q9ERP3 Gm27959-201ENSMUST00000185172 111 ntBASIC2.53□□□□□ -2
Trim54Q9ERP3 Gm25820-202ENSMUST00000197479 128 ntBASIC2.53□□□□□ -2
Trim54Q9ERP3 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trim54Q9ERP3 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Trim54Q9ERP3 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.52□□□□□ -2.01
Trim54Q9ERP3 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trim54Q9ERP3 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Trim54Q9ERP3 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trim54Q9ERP3 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trim54Q9ERP3 Gm13967-201ENSMUST00000120404 380 ntBASIC2.52□□□□□ -2.01
Trim54Q9ERP3 Gm15213-201ENSMUST00000122098 216 ntBASIC2.52□□□□□ -2.01
Trim54Q9ERP3 Gm23980-201ENSMUST00000157135 158 ntBASIC2.52□□□□□ -2.01
Trim54Q9ERP3 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC2.52□□□□□ -2.01
Trim54Q9ERP3 Gm22264-201ENSMUST00000178200 107 ntBASIC2.52□□□□□ -2.01
Trim54Q9ERP3 Gm37763-201ENSMUST00000193445 120 ntBASIC2.52□□□□□ -2.01
Trim54Q9ERP3 Mir3535-201ENSMUST00000197651 147 ntBASIC2.52□□□□□ -2.01
Trim54Q9ERP3 Mir3970-201ENSMUST00000199287 90 ntBASIC2.52□□□□□ -2.01
Trim54Q9ERP3 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.52□□□□□ -2.01
Trim54Q9ERP3 Gm44959-201ENSMUST00000209127 231 ntBASIC2.52□□□□□ -2.01
Trim54Q9ERP3 Gm8031-201ENSMUST00000213430 626 ntBASIC2.52□□□□□ -2.01
Trim54Q9ERP3 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trim54Q9ERP3 AC160115.1-201ENSMUST00000224678 1574 ntBASIC2.52□□□□□ -2.01
Trim54Q9ERP3 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.52□□□□□ -2.01
Trim54Q9ERP3 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trim54Q9ERP3 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Trim54Q9ERP3 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trim54Q9ERP3 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Trim54Q9ERP3 Gm24629-201ENSMUST00000122762 89 ntBASIC2.51□□□□□ -2.01
Trim54Q9ERP3 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Trim54Q9ERP3 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Trim54Q9ERP3 Gm24480-201ENSMUST00000157442 103 ntBASIC2.51□□□□□ -2.01
Trim54Q9ERP3 Gm24813-201ENSMUST00000175310 84 ntBASIC2.51□□□□□ -2.01
Trim54Q9ERP3 Gm23003-201ENSMUST00000179948 107 ntBASIC2.51□□□□□ -2.01
Trim54Q9ERP3 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.51□□□□□ -2.01
Trim54Q9ERP3 Gm44182-201ENSMUST00000204052 115 ntBASIC2.51□□□□□ -2.01
Trim54Q9ERP3 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trim54Q9ERP3 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 153.5 ms