Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.04□□□□□ -2.24
Lima1Q9ERG0 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.04□□□□□ -2.24
Lima1Q9ERG0 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.04□□□□□ -2.24
Lima1Q9ERG0 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.04□□□□□ -2.24
Lima1Q9ERG0 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.04□□□□□ -2.24
Lima1Q9ERG0 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.04□□□□□ -2.24
Lima1Q9ERG0 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.04□□□□□ -2.24
Lima1Q9ERG0 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.04□□□□□ -2.24
Lima1Q9ERG0 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
Lima1Q9ERG0 Gm29005-201ENSMUST00000186773 320 ntBASIC1.04□□□□□ -2.24
Lima1Q9ERG0 Gm29352-201ENSMUST00000188054 544 ntBASIC1.04□□□□□ -2.24
Lima1Q9ERG0 Gm44337-201ENSMUST00000196553 114 ntBASIC1.04□□□□□ -2.24
Lima1Q9ERG0 AC134334.1-201ENSMUST00000214277 255 ntBASIC1.04□□□□□ -2.24
Lima1Q9ERG0 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.04□□□□□ -2.24
Lima1Q9ERG0 AC192616.1-201ENSMUST00000221922 132 ntBASIC1.04□□□□□ -2.24
Lima1Q9ERG0 Snord96a-201ENSMUST00000082791 81 ntBASIC1.04□□□□□ -2.24
Lima1Q9ERG0 Mir340-201ENSMUST00000083483 98 ntBASIC1.04□□□□□ -2.24
Lima1Q9ERG0 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Lima1Q9ERG0 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.04□□□□□ -2.24
Lima1Q9ERG0 Mir374b-201ENSMUST00000102314 95 ntBASIC1.03□□□□□ -2.24
Lima1Q9ERG0 Mir343-201ENSMUST00000102360 75 ntBASIC1.03□□□□□ -2.24
Lima1Q9ERG0 Gm22780-201ENSMUST00000104084 132 ntBASIC1.03□□□□□ -2.24
Lima1Q9ERG0 Gm22193-201ENSMUST00000116868 76 ntBASIC1.03□□□□□ -2.24
Lima1Q9ERG0 Gm13457-201ENSMUST00000117885 267 ntBASIC1.03□□□□□ -2.24
Lima1Q9ERG0 Gm12512-201ENSMUST00000119620 217 ntBASIC1.03□□□□□ -2.24
Lima1Q9ERG0 Gm11407-201ENSMUST00000120362 1058 ntBASIC1.03□□□□□ -2.24
Lima1Q9ERG0 Gm25054-201ENSMUST00000157370 97 ntBASIC1.03□□□□□ -2.24
Lima1Q9ERG0 Gm26149-201ENSMUST00000157432 108 ntBASIC1.03□□□□□ -2.24
Lima1Q9ERG0 Gm22654-201ENSMUST00000157874 105 ntBASIC1.03□□□□□ -2.24
Lima1Q9ERG0 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.03□□□□□ -2.24
Lima1Q9ERG0 Gm29613-201ENSMUST00000185846 313 ntBASIC1.03□□□□□ -2.24
Lima1Q9ERG0 Gm29544-201ENSMUST00000188860 313 ntBASIC1.03□□□□□ -2.24
Lima1Q9ERG0 Gm28808-201ENSMUST00000190978 313 ntBASIC1.03□□□□□ -2.24
Lima1Q9ERG0 Gm38261-201ENSMUST00000192608 316 ntBASIC1.03□□□□□ -2.24
Lima1Q9ERG0 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.03□□□□□ -2.24
Lima1Q9ERG0 Gm25586-201ENSMUST00000082499 112 ntBASIC1.03□□□□□ -2.24
Lima1Q9ERG0 Gm26457-201ENSMUST00000082678 78 ntBASIC1.03□□□□□ -2.24
Lima1Q9ERG0 Gm24536-201ENSMUST00000083144 107 ntBASIC1.03□□□□□ -2.24
Lima1Q9ERG0 Gm26249-201ENSMUST00000116708 118 ntBASIC1.02□□□□□ -2.25
Lima1Q9ERG0 Gm14937-201ENSMUST00000119709 208 ntBASIC1.02□□□□□ -2.25
Lima1Q9ERG0 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.02□□□□□ -2.25
Lima1Q9ERG0 Gm23120-201ENSMUST00000157654 287 ntBASIC1.02□□□□□ -2.25
Lima1Q9ERG0 Gm24191-201ENSMUST00000157977 122 ntBASIC1.02□□□□□ -2.25
Lima1Q9ERG0 Gm22164-201ENSMUST00000158413 106 ntBASIC1.02□□□□□ -2.25
Lima1Q9ERG0 Gm23208-201ENSMUST00000158666 127 ntBASIC1.02□□□□□ -2.25
Lima1Q9ERG0 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Lima1Q9ERG0 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.02□□□□□ -2.25
Lima1Q9ERG0 Gm22166-201ENSMUST00000178419 121 ntBASIC1.02□□□□□ -2.25
Lima1Q9ERG0 Gm23288-201ENSMUST00000179213 121 ntBASIC1.02□□□□□ -2.25
Lima1Q9ERG0 Gm24020-201ENSMUST00000180156 108 ntBASIC1.02□□□□□ -2.25
Lima1Q9ERG0 Mir8119-201ENSMUST00000183371 129 ntBASIC1.02□□□□□ -2.25
Lima1Q9ERG0 Mir195b-201ENSMUST00000184814 97 ntBASIC1.02□□□□□ -2.25
Lima1Q9ERG0 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.02□□□□□ -2.25
Lima1Q9ERG0 Gm34073-201ENSMUST00000195736 212 ntBASIC1.02□□□□□ -2.25
Lima1Q9ERG0 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Lima1Q9ERG0 Gm24623-201ENSMUST00000082616 194 ntBASIC1.02□□□□□ -2.25
Lima1Q9ERG0 Snord118-201ENSMUST00000082965 135 ntBASIC1.02□□□□□ -2.25
Lima1Q9ERG0 Gm22972-201ENSMUST00000083297 131 ntBASIC1.02□□□□□ -2.25
Lima1Q9ERG0 Gm24338-201ENSMUST00000104205 127 ntBASIC1.01□□□□□ -2.25
Lima1Q9ERG0 Gm24282-201ENSMUST00000104232 66 ntBASIC1.01□□□□□ -2.25
Lima1Q9ERG0 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC1.01□□□□□ -2.25
Lima1Q9ERG0 Gm25371-201ENSMUST00000158162 101 ntBASIC1.01□□□□□ -2.25
Lima1Q9ERG0 Gm26405-201ENSMUST00000158495 100 ntBASIC1.01□□□□□ -2.25
Lima1Q9ERG0 Gm26213-201ENSMUST00000158582 110 ntBASIC1.01□□□□□ -2.25
Lima1Q9ERG0 Gm16038-201ENSMUST00000159317 193 ntBASIC1.01□□□□□ -2.25
Lima1Q9ERG0 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC1.01□□□□□ -2.25
Lima1Q9ERG0 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.01□□□□□ -2.25
Lima1Q9ERG0 Gm29037-201ENSMUST00000189092 313 ntBASIC1.01□□□□□ -2.25
Lima1Q9ERG0 Gm9156-201ENSMUST00000189660 463 ntBASIC1.01□□□□□ -2.25
Lima1Q9ERG0 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.01□□□□□ -2.25
Lima1Q9ERG0 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.01□□□□□ -2.25
Lima1Q9ERG0 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.01□□□□□ -2.25
Lima1Q9ERG0 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.01□□□□□ -2.25
Lima1Q9ERG0 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.01□□□□□ -2.25
Lima1Q9ERG0 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.01□□□□□ -2.25
Lima1Q9ERG0 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
Lima1Q9ERG0 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.01□□□□□ -2.25
Lima1Q9ERG0 Gm23448-201ENSMUST00000083151 104 ntBASIC1.01□□□□□ -2.25
Lima1Q9ERG0 Mir22-201ENSMUST00000083595 95 ntBASIC1.01□□□□□ -2.25
Lima1Q9ERG0 Gm25651-201ENSMUST00000083782 119 ntBASIC1.01□□□□□ -2.25
Lima1Q9ERG0 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
Lima1Q9ERG0 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Lima1Q9ERG0 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1□□□□□ -2.25
Lima1Q9ERG0 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1□□□□□ -2.25
Lima1Q9ERG0 Gm22221-201ENSMUST00000157362 103 ntBASIC1□□□□□ -2.25
Lima1Q9ERG0 Gm23636-201ENSMUST00000175070 95 ntBASIC1□□□□□ -2.25
Lima1Q9ERG0 Gm26501-201ENSMUST00000178307 107 ntBASIC1□□□□□ -2.25
Lima1Q9ERG0 Gm24390-201ENSMUST00000179578 62 ntBASIC1□□□□□ -2.25
Lima1Q9ERG0 Gm23523-201ENSMUST00000180190 107 ntBASIC1□□□□□ -2.25
Lima1Q9ERG0 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC1□□□□□ -2.25
Lima1Q9ERG0 Gm27385-201ENSMUST00000184747 104 ntBASIC1□□□□□ -2.25
Lima1Q9ERG0 Gm20118-201ENSMUST00000187207 162 ntBASIC1□□□□□ -2.25
Lima1Q9ERG0 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1□□□□□ -2.25
Lima1Q9ERG0 Trbv22-201ENSMUST00000191697 291 ntBASIC1□□□□□ -2.25
Lima1Q9ERG0 Gm18296-201ENSMUST00000192475 783 ntBASIC1□□□□□ -2.25
Lima1Q9ERG0 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Lima1Q9ERG0 CT009718.4-201ENSMUST00000221881 109 ntBASIC1□□□□□ -2.25
Lima1Q9ERG0 AC132918.1-201ENSMUST00000227877 925 ntBASIC1□□□□□ -2.25
Lima1Q9ERG0 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1□□□□□ -2.25
Lima1Q9ERG0 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 107.8 ms