Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Scn4aQ9ER60 Gm28058-201ENSMUST00000186421 264 ntBASIC1.78□□□□□ -2.12
Scn4aQ9ER60 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Scn4aQ9ER60 Gm37557-201ENSMUST00000191640 139 ntBASIC1.78□□□□□ -2.12
Scn4aQ9ER60 Gm37128-201ENSMUST00000192599 232 ntBASIC1.78□□□□□ -2.12
Scn4aQ9ER60 Gm18546-201ENSMUST00000197245 676 ntBASIC1.78□□□□□ -2.12
Scn4aQ9ER60 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.78□□□□□ -2.12
Scn4aQ9ER60 Gm25801-201ENSMUST00000082638 106 ntBASIC1.78□□□□□ -2.12
Scn4aQ9ER60 Gm26066-201ENSMUST00000083385 109 ntBASIC1.78□□□□□ -2.12
Scn4aQ9ER60 Mir374b-201ENSMUST00000102314 95 ntBASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Gm11854-201ENSMUST00000117839 446 ntBASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Gm14748-201ENSMUST00000119819 411 ntBASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Gm24598-201ENSMUST00000122510 74 ntBASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Gm29231-201ENSMUST00000179850 319 ntBASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Gm43708-201ENSMUST00000198857 961 ntBASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Snord43-201ENSMUST00000199549 108 ntBASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Gm45315-201ENSMUST00000209283 333 ntBASIC1.77□□□□□ -2.13
Scn4aQ9ER60 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.77□□□□□ -2.13
Scn4aQ9ER60 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Gm24977-201ENSMUST00000083106 163 ntBASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Gm22731-201ENSMUST00000158086 94 ntBASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Gm22386-201ENSMUST00000158192 129 ntBASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Mir6355-201ENSMUST00000183687 106 ntBASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Mir195b-201ENSMUST00000184814 97 ntBASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Gm2829-201ENSMUST00000213121 499 ntBASIC1.77□□□□□ -2.13
Scn4aQ9ER60 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.77□□□□□ -2.13
Scn4aQ9ER60 Gm11512-201ENSMUST00000119669 663 ntBASIC1.76□□□□□ -2.13
Scn4aQ9ER60 Gm23893-201ENSMUST00000158106 134 ntBASIC1.76□□□□□ -2.13
Scn4aQ9ER60 Gm7925-201ENSMUST00000166690 401 ntBASIC1.76□□□□□ -2.13
Scn4aQ9ER60 Gm27607-201ENSMUST00000185162 122 ntBASIC1.76□□□□□ -2.13
Scn4aQ9ER60 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.76□□□□□ -2.13
Scn4aQ9ER60 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.76□□□□□ -2.13
Scn4aQ9ER60 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Scn4aQ9ER60 Gm24623-201ENSMUST00000082616 194 ntBASIC1.76□□□□□ -2.13
Scn4aQ9ER60 Mir93-201ENSMUST00000083593 88 ntBASIC1.76□□□□□ -2.13
Scn4aQ9ER60 Gm25409-201ENSMUST00000083764 131 ntBASIC1.76□□□□□ -2.13
Scn4aQ9ER60 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Scn4aQ9ER60 Gm23858-201ENSMUST00000158384 106 ntBASIC1.75□□□□□ -2.13
Scn4aQ9ER60 Gm37923-201ENSMUST00000191624 161 ntBASIC1.75□□□□□ -2.13
Scn4aQ9ER60 Gm33866-201ENSMUST00000196911 289 ntBASIC1.75□□□□□ -2.13
Scn4aQ9ER60 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.75□□□□□ -2.13
Scn4aQ9ER60 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.75□□□□□ -2.13
Scn4aQ9ER60 Gm22709-201ENSMUST00000116893 111 ntBASIC1.75□□□□□ -2.13
Scn4aQ9ER60 n-R5s207-201ENSMUST00000122497 118 ntBASIC1.75□□□□□ -2.13
Scn4aQ9ER60 Gm29350-201ENSMUST00000189141 541 ntBASIC1.75□□□□□ -2.13
Scn4aQ9ER60 Gm11935-201ENSMUST00000118608 399 ntBASIC1.74□□□□□ -2.13
Scn4aQ9ER60 Gm24467-201ENSMUST00000157887 126 ntBASIC1.74□□□□□ -2.13
Scn4aQ9ER60 Gm24577-201ENSMUST00000158580 63 ntBASIC1.74□□□□□ -2.13
Scn4aQ9ER60 Gm24333-201ENSMUST00000175101 84 ntBASIC1.74□□□□□ -2.13
Scn4aQ9ER60 Gm26200-201ENSMUST00000180273 79 ntBASIC1.74□□□□□ -2.13
Scn4aQ9ER60 Mir6381-201ENSMUST00000183426 87 ntBASIC1.74□□□□□ -2.13
Scn4aQ9ER60 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.74□□□□□ -2.13
Scn4aQ9ER60 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.74□□□□□ -2.13
Scn4aQ9ER60 Gm44446-201ENSMUST00000204864 255 ntBASIC1.74□□□□□ -2.13
Scn4aQ9ER60 Gm17990-201ENSMUST00000211728 553 ntBASIC1.74□□□□□ -2.13
Scn4aQ9ER60 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.74□□□□□ -2.13
Scn4aQ9ER60 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.74□□□□□ -2.13
Scn4aQ9ER60 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Scn4aQ9ER60 Gm23454-201ENSMUST00000083332 133 ntBASIC1.74□□□□□ -2.13
Scn4aQ9ER60 Gm14709-201ENSMUST00000121225 304 ntBASIC1.73□□□□□ -2.13
Scn4aQ9ER60 Gm24726-201ENSMUST00000158232 121 ntBASIC1.73□□□□□ -2.13
Scn4aQ9ER60 Gm20689-201ENSMUST00000176033 279 ntBASIC1.73□□□□□ -2.13
Scn4aQ9ER60 Gm25933-201ENSMUST00000178943 108 ntBASIC1.73□□□□□ -2.13
Scn4aQ9ER60 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Scn4aQ9ER60 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Scn4aQ9ER60 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.73□□□□□ -2.13
Scn4aQ9ER60 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.73□□□□□ -2.13
Scn4aQ9ER60 Mir3096-201ENSMUST00000116685 71 ntBASIC1.73□□□□□ -2.13
Scn4aQ9ER60 Gm23059-201ENSMUST00000158978 107 ntBASIC1.73□□□□□ -2.13
Scn4aQ9ER60 Mir28b-201ENSMUST00000175399 80 ntBASIC1.73□□□□□ -2.13
Scn4aQ9ER60 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Scn4aQ9ER60 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.73□□□□□ -2.13
Scn4aQ9ER60 Gm18971-201ENSMUST00000197240 374 ntBASIC1.73□□□□□ -2.13
Scn4aQ9ER60 Gm44465-201ENSMUST00000199536 114 ntBASIC1.73□□□□□ -2.13
Scn4aQ9ER60 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.73□□□□□ -2.13
Scn4aQ9ER60 Gm24412-201ENSMUST00000083426 109 ntBASIC1.73□□□□□ -2.13
Scn4aQ9ER60 Gm22221-201ENSMUST00000157362 103 ntBASIC1.72□□□□□ -2.13
Scn4aQ9ER60 Gm25368-201ENSMUST00000158847 131 ntBASIC1.72□□□□□ -2.13
Scn4aQ9ER60 Gm25956-201ENSMUST00000175115 217 ntBASIC1.72□□□□□ -2.13
Scn4aQ9ER60 Gm25457-201ENSMUST00000179509 107 ntBASIC1.72□□□□□ -2.13
Scn4aQ9ER60 Gm28740-201ENSMUST00000186142 215 ntBASIC1.72□□□□□ -2.13
Scn4aQ9ER60 Gm43367-201ENSMUST00000199986 625 ntBASIC1.72□□□□□ -2.13
Scn4aQ9ER60 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.72□□□□□ -2.13
Scn4aQ9ER60 Gm22654-201ENSMUST00000157874 105 ntBASIC1.71□□□□□ -2.14
Scn4aQ9ER60 Gm25335-201ENSMUST00000158043 103 ntBASIC1.71□□□□□ -2.14
Scn4aQ9ER60 Mir5124a-201ENSMUST00000175528 72 ntBASIC1.71□□□□□ -2.14
Scn4aQ9ER60 Gm25633-201ENSMUST00000178565 107 ntBASIC1.71□□□□□ -2.14
Scn4aQ9ER60 Gm18854-201ENSMUST00000211196 329 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms