Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Mir127-201ENSMUST00000093568 70 ntBASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Upf1Q9EPU0 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Upf1Q9EPU0 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Upf1Q9EPU0 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Upf1Q9EPU0 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Upf1Q9EPU0 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Upf1Q9EPU0 Gm23128-201ENSMUST00000104257 132 ntBASIC3.54□□□□□ -1.84
Upf1Q9EPU0 Gm23492-201ENSMUST00000116837 115 ntBASIC3.54□□□□□ -1.84
Upf1Q9EPU0 Gm12550-201ENSMUST00000118478 329 ntBASIC3.54□□□□□ -1.84
Upf1Q9EPU0 Gm22217-201ENSMUST00000157556 313 ntBASIC3.54□□□□□ -1.84
Upf1Q9EPU0 Gm24075-201ENSMUST00000158175 72 ntBASIC3.54□□□□□ -1.84
Upf1Q9EPU0 Gm25935-201ENSMUST00000178746 107 ntBASIC3.54□□□□□ -1.84
Upf1Q9EPU0 Mir7013-201ENSMUST00000183540 72 ntBASIC3.54□□□□□ -1.84
Upf1Q9EPU0 Gm29005-201ENSMUST00000186773 320 ntBASIC3.54□□□□□ -1.84
Upf1Q9EPU0 Gm23128-202ENSMUST00000196578 133 ntBASIC3.54□□□□□ -1.84
Upf1Q9EPU0 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.54□□□□□ -1.84
Upf1Q9EPU0 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.54□□□□□ -1.84
Upf1Q9EPU0 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.54□□□□□ -1.84
Upf1Q9EPU0 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.54□□□□□ -1.84
Upf1Q9EPU0 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Gm26026-201ENSMUST00000122726 123 ntBASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Gm25625-201ENSMUST00000157221 96 ntBASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Gm22947-201ENSMUST00000158559 91 ntBASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Gm27793-201ENSMUST00000183405 76 ntBASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Gm27928-201ENSMUST00000183747 256 ntBASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Mir7226-201ENSMUST00000184953 60 ntBASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Gm19901-201ENSMUST00000192191 495 ntBASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.53□□□□□ -1.84
Upf1Q9EPU0 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Upf1Q9EPU0 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Gm24355-201ENSMUST00000082858 122 ntBASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Gm23847-201ENSMUST00000083829 110 ntBASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Gm24163-201ENSMUST00000093660 132 ntBASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Upf1Q9EPU0 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.53□□□□□ -1.84
Upf1Q9EPU0 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.85
Upf1Q9EPU0 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
Upf1Q9EPU0 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Upf1Q9EPU0 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Upf1Q9EPU0 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Upf1Q9EPU0 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Upf1Q9EPU0 Gm12926-201ENSMUST00000121158 409 ntBASIC3.52□□□□□ -1.85
Upf1Q9EPU0 Gm15365-201ENSMUST00000122392 300 ntBASIC3.52□□□□□ -1.85
Upf1Q9EPU0 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.52□□□□□ -1.85
Upf1Q9EPU0 Gm24911-201ENSMUST00000157292 136 ntBASIC3.52□□□□□ -1.85
Upf1Q9EPU0 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC3.52□□□□□ -1.85
Upf1Q9EPU0 Snord92-201ENSMUST00000175548 85 ntBASIC3.52□□□□□ -1.85
Upf1Q9EPU0 Gm20718-201ENSMUST00000176058 259 ntBASIC3.52□□□□□ -1.85
Upf1Q9EPU0 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Upf1Q9EPU0 Gm44887-201ENSMUST00000208980 178 ntBASIC3.52□□□□□ -1.85
Upf1Q9EPU0 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.52□□□□□ -1.85
Upf1Q9EPU0 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC3.52□□□□□ -1.85
Upf1Q9EPU0 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Upf1Q9EPU0 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC3.51□□□□□ -1.85
Upf1Q9EPU0 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.51□□□□□ -1.85
Upf1Q9EPU0 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
Upf1Q9EPU0 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Upf1Q9EPU0 Mir767-201ENSMUST00000103256 107 ntBASIC3.51□□□□□ -1.85
Upf1Q9EPU0 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Upf1Q9EPU0 Gm25421-201ENSMUST00000104218 164 ntBASIC3.51□□□□□ -1.85
Upf1Q9EPU0 Mir466k-201ENSMUST00000116774 122 ntBASIC3.51□□□□□ -1.85
Upf1Q9EPU0 Gm23551-201ENSMUST00000116852 121 ntBASIC3.51□□□□□ -1.85
Upf1Q9EPU0 Gm22097-201ENSMUST00000157929 278 ntBASIC3.51□□□□□ -1.85
Upf1Q9EPU0 Gm24930-201ENSMUST00000158315 83 ntBASIC3.51□□□□□ -1.85
Upf1Q9EPU0 Gm25457-201ENSMUST00000179509 107 ntBASIC3.51□□□□□ -1.85
Upf1Q9EPU0 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC3.51□□□□□ -1.85
Upf1Q9EPU0 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.51□□□□□ -1.85
Upf1Q9EPU0 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.51□□□□□ -1.85
Upf1Q9EPU0 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC3.51□□□□□ -1.85
Upf1Q9EPU0 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.51□□□□□ -1.85
Upf1Q9EPU0 AC132615.1-201ENSMUST00000213873 255 ntBASIC3.51□□□□□ -1.85
Upf1Q9EPU0 Gm9174-201ENSMUST00000078149 255 ntBASIC3.51□□□□□ -1.85
Upf1Q9EPU0 Gm26494-201ENSMUST00000083154 143 ntBASIC3.51□□□□□ -1.85
Upf1Q9EPU0 Gm26265-201ENSMUST00000083277 135 ntBASIC3.51□□□□□ -1.85
Upf1Q9EPU0 Gm24493-201ENSMUST00000083805 143 ntBASIC3.51□□□□□ -1.85
Upf1Q9EPU0 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.5□□□□□ -1.85
Upf1Q9EPU0 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
Upf1Q9EPU0 Gm22149-201ENSMUST00000104442 136 ntBASIC3.5□□□□□ -1.85
Upf1Q9EPU0 Gm25113-201ENSMUST00000157185 143 ntBASIC3.5□□□□□ -1.85
Upf1Q9EPU0 Gm17052-201ENSMUST00000165496 289 ntBASIC3.5□□□□□ -1.85
Upf1Q9EPU0 Gm25020-201ENSMUST00000178071 107 ntBASIC3.5□□□□□ -1.85
Upf1Q9EPU0 Gm26928-201ENSMUST00000182674 572 ntBASIC3.5□□□□□ -1.85
Upf1Q9EPU0 Gm27465-201ENSMUST00000184290 91 ntBASIC3.5□□□□□ -1.85
Upf1Q9EPU0 Gm38311-201ENSMUST00000192945 165 ntBASIC3.5□□□□□ -1.85
Upf1Q9EPU0 Gm38356-201ENSMUST00000194313 408 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms