Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm25423-201ENSMUST00000157609 107 ntBASIC1.06□□□□□ -2.24
Ccdc3Q9D6Y1 Gm23120-201ENSMUST00000157654 287 ntBASIC1.06□□□□□ -2.24
Ccdc3Q9D6Y1 Gm22537-201ENSMUST00000158172 199 ntBASIC1.06□□□□□ -2.24
Ccdc3Q9D6Y1 Gm23854-201ENSMUST00000158378 108 ntBASIC1.06□□□□□ -2.24
Ccdc3Q9D6Y1 Gm26363-201ENSMUST00000158866 83 ntBASIC1.06□□□□□ -2.24
Ccdc3Q9D6Y1 Gm24084-201ENSMUST00000175173 137 ntBASIC1.06□□□□□ -2.24
Ccdc3Q9D6Y1 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Ccdc3Q9D6Y1 Gm42570-201ENSMUST00000195937 292 ntBASIC1.06□□□□□ -2.24
Ccdc3Q9D6Y1 Gm45375-201ENSMUST00000210338 280 ntBASIC1.06□□□□□ -2.24
Ccdc3Q9D6Y1 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.06□□□□□ -2.24
Ccdc3Q9D6Y1 AC153968.2-201ENSMUST00000215579 1140 ntBASIC1.06□□□□□ -2.24
Ccdc3Q9D6Y1 AC156790.3-201ENSMUST00000226200 254 ntBASIC1.06□□□□□ -2.24
Ccdc3Q9D6Y1 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.06□□□□□ -2.24
Ccdc3Q9D6Y1 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.06□□□□□ -2.24
Ccdc3Q9D6Y1 Gm24977-201ENSMUST00000083106 163 ntBASIC1.06□□□□□ -2.24
Ccdc3Q9D6Y1 Snora34-201ENSMUST00000083402 138 ntBASIC1.06□□□□□ -2.24
Ccdc3Q9D6Y1 Gm11407-201ENSMUST00000120362 1058 ntBASIC1.05□□□□□ -2.24
Ccdc3Q9D6Y1 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.05□□□□□ -2.24
Ccdc3Q9D6Y1 Gm22027-201ENSMUST00000122737 127 ntBASIC1.05□□□□□ -2.24
Ccdc3Q9D6Y1 Gm22221-201ENSMUST00000157362 103 ntBASIC1.05□□□□□ -2.24
Ccdc3Q9D6Y1 Gm25384-201ENSMUST00000157807 105 ntBASIC1.05□□□□□ -2.24
Ccdc3Q9D6Y1 Gm9156-201ENSMUST00000189660 463 ntBASIC1.05□□□□□ -2.24
Ccdc3Q9D6Y1 Gm45658-201ENSMUST00000209197 580 ntBASIC1.05□□□□□ -2.24
Ccdc3Q9D6Y1 AC162934.3-201ENSMUST00000223015 841 ntBASIC1.05□□□□□ -2.24
Ccdc3Q9D6Y1 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.05□□□□□ -2.24
Ccdc3Q9D6Y1 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Ccdc3Q9D6Y1 Mir374b-201ENSMUST00000102314 95 ntBASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 Gm13153-201ENSMUST00000120969 637 ntBASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 Gm23656-201ENSMUST00000122626 112 ntBASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 Gm25914-201ENSMUST00000157618 153 ntBASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 Gm26089-201ENSMUST00000157898 107 ntBASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 Gm25044-201ENSMUST00000158603 104 ntBASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 Mir6381-201ENSMUST00000183426 87 ntBASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 Gm27271-201ENSMUST00000183509 170 ntBASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 Gm28912-201ENSMUST00000189001 234 ntBASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 Gm38280-201ENSMUST00000192610 158 ntBASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 AC134334.1-201ENSMUST00000214277 255 ntBASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 AC153141.1-201ENSMUST00000218636 501 ntBASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 AC192616.1-201ENSMUST00000221922 132 ntBASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Ccdc3Q9D6Y1 Gm25876-201ENSMUST00000104329 119 ntBASIC1.03□□□□□ -2.24
Ccdc3Q9D6Y1 Gm24915-201ENSMUST00000157288 78 ntBASIC1.03□□□□□ -2.24
Ccdc3Q9D6Y1 Gm25371-201ENSMUST00000158162 101 ntBASIC1.03□□□□□ -2.24
Ccdc3Q9D6Y1 Gm25413-201ENSMUST00000158544 312 ntBASIC1.03□□□□□ -2.24
Ccdc3Q9D6Y1 Gm9830-201ENSMUST00000178509 357 ntBASIC1.03□□□□□ -2.24
Ccdc3Q9D6Y1 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Ccdc3Q9D6Y1 Gm29350-201ENSMUST00000189141 541 ntBASIC1.03□□□□□ -2.24
Ccdc3Q9D6Y1 Gm28437-201ENSMUST00000190277 783 ntBASIC1.03□□□□□ -2.24
Ccdc3Q9D6Y1 Gm37641-201ENSMUST00000193837 239 ntBASIC1.03□□□□□ -2.24
Ccdc3Q9D6Y1 Gm43245-201ENSMUST00000197603 468 ntBASIC1.03□□□□□ -2.24
Ccdc3Q9D6Y1 Gm44923-201ENSMUST00000206673 85 ntBASIC1.03□□□□□ -2.24
Ccdc3Q9D6Y1 Gm18854-201ENSMUST00000211196 329 ntBASIC1.03□□□□□ -2.24
Ccdc3Q9D6Y1 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.03□□□□□ -2.24
Ccdc3Q9D6Y1 Gm19441-201ENSMUST00000221545 330 ntBASIC1.03□□□□□ -2.24
Ccdc3Q9D6Y1 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.03□□□□□ -2.24
Ccdc3Q9D6Y1 Snord118-201ENSMUST00000082965 135 ntBASIC1.03□□□□□ -2.24
Ccdc3Q9D6Y1 Gm22972-201ENSMUST00000083297 131 ntBASIC1.03□□□□□ -2.24
Ccdc3Q9D6Y1 Mir340-201ENSMUST00000083483 98 ntBASIC1.03□□□□□ -2.24
Ccdc3Q9D6Y1 Gm25651-201ENSMUST00000083782 119 ntBASIC1.03□□□□□ -2.24
Ccdc3Q9D6Y1 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
Ccdc3Q9D6Y1 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.02□□□□□ -2.25
Ccdc3Q9D6Y1 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Ccdc3Q9D6Y1 Gm14937-201ENSMUST00000119709 208 ntBASIC1.02□□□□□ -2.25
Ccdc3Q9D6Y1 Gm26150-201ENSMUST00000157426 151 ntBASIC1.02□□□□□ -2.25
Ccdc3Q9D6Y1 Gm26405-201ENSMUST00000158495 100 ntBASIC1.02□□□□□ -2.25
Ccdc3Q9D6Y1 Gm22074-201ENSMUST00000158595 113 ntBASIC1.02□□□□□ -2.25
Ccdc3Q9D6Y1 Gm23725-201ENSMUST00000177876 107 ntBASIC1.02□□□□□ -2.25
Ccdc3Q9D6Y1 Mir7091-201ENSMUST00000184075 79 ntBASIC1.02□□□□□ -2.25
Ccdc3Q9D6Y1 Gm29613-201ENSMUST00000185846 313 ntBASIC1.02□□□□□ -2.25
Ccdc3Q9D6Y1 Gm29544-201ENSMUST00000188860 313 ntBASIC1.02□□□□□ -2.25
Ccdc3Q9D6Y1 Gm28808-201ENSMUST00000190978 313 ntBASIC1.02□□□□□ -2.25
Ccdc3Q9D6Y1 Gm43035-201ENSMUST00000197626 517 ntBASIC1.02□□□□□ -2.25
Ccdc3Q9D6Y1 Gm44142-201ENSMUST00000203358 311 ntBASIC1.02□□□□□ -2.25
Ccdc3Q9D6Y1 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.02□□□□□ -2.25
Ccdc3Q9D6Y1 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.02□□□□□ -2.25
Ccdc3Q9D6Y1 AC144733.1-201ENSMUST00000222893 1289 ntBASIC1.02□□□□□ -2.25
Ccdc3Q9D6Y1 Mir27b-201ENSMUST00000083541 73 ntBASIC1.02□□□□□ -2.25
Ccdc3Q9D6Y1 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.01□□□□□ -2.25
Ccdc3Q9D6Y1 AC124426.1-203ENSMUST00000221814 1362 ntBASIC1.01□□□□□ -2.25
Ccdc3Q9D6Y1 Gm23015-201ENSMUST00000104145 128 ntBASIC1.01□□□□□ -2.25
Ccdc3Q9D6Y1 Gm26249-201ENSMUST00000116708 118 ntBASIC1.01□□□□□ -2.25
Ccdc3Q9D6Y1 Mir1904-201ENSMUST00000122702 80 ntBASIC1.01□□□□□ -2.25
Ccdc3Q9D6Y1 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.01□□□□□ -2.25
Ccdc3Q9D6Y1 Gm24241-201ENSMUST00000157787 145 ntBASIC1.01□□□□□ -2.25
Ccdc3Q9D6Y1 Rnu7-201ENSMUST00000158458 62 ntBASIC1.01□□□□□ -2.25
Ccdc3Q9D6Y1 Gm22263-201ENSMUST00000180060 104 ntBASIC1.01□□□□□ -2.25
Ccdc3Q9D6Y1 Gm27419-201ENSMUST00000184576 109 ntBASIC1.01□□□□□ -2.25
Ccdc3Q9D6Y1 Gm29037-201ENSMUST00000189092 313 ntBASIC1.01□□□□□ -2.25
Ccdc3Q9D6Y1 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Ccdc3Q9D6Y1 Gm42857-201ENSMUST00000200823 339 ntBASIC1.01□□□□□ -2.25
Ccdc3Q9D6Y1 Gm45366-201ENSMUST00000209828 384 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 168 ms