Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 Gm22784-201ENSMUST00000104088 132 ntBASIC2.59□□□□□ -1.99
Cthrc1Q9D1D6 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.59□□□□□ -1.99
Cthrc1Q9D1D6 Gm25457-201ENSMUST00000179509 107 ntBASIC2.59□□□□□ -1.99
Cthrc1Q9D1D6 Gm22450-201ENSMUST00000179641 107 ntBASIC2.59□□□□□ -1.99
Cthrc1Q9D1D6 Gm25235-201ENSMUST00000179933 107 ntBASIC2.59□□□□□ -1.99
Cthrc1Q9D1D6 Gm25473-201ENSMUST00000180191 107 ntBASIC2.59□□□□□ -1.99
Cthrc1Q9D1D6 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.59□□□□□ -1.99
Cthrc1Q9D1D6 Gm37037-201ENSMUST00000194475 424 ntBASIC2.59□□□□□ -1.99
Cthrc1Q9D1D6 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC2.59□□□□□ -1.99
Cthrc1Q9D1D6 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.59□□□□□ -1.99
Cthrc1Q9D1D6 Gm45859-201ENSMUST00000212794 214 ntBASIC2.59□□□□□ -1.99
Cthrc1Q9D1D6 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC2.59□□□□□ -1.99
Cthrc1Q9D1D6 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.59□□□□□ -1.99
Cthrc1Q9D1D6 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.59□□□□□ -1.99
Cthrc1Q9D1D6 Gm25930-201ENSMUST00000082785 107 ntBASIC2.59□□□□□ -1.99
Cthrc1Q9D1D6 Gm24856-201ENSMUST00000082809 107 ntBASIC2.59□□□□□ -1.99
Cthrc1Q9D1D6 Gm26071-201ENSMUST00000083261 107 ntBASIC2.59□□□□□ -1.99
Cthrc1Q9D1D6 Mir181b-2-201ENSMUST00000083644 89 ntBASIC2.59□□□□□ -1.99
Cthrc1Q9D1D6 Gm24521-201ENSMUST00000083958 107 ntBASIC2.59□□□□□ -1.99
Cthrc1Q9D1D6 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cthrc1Q9D1D6 Gm12513-201ENSMUST00000118617 352 ntBASIC2.58□□□□□ -2
Cthrc1Q9D1D6 Gm12771-201ENSMUST00000120246 135 ntBASIC2.58□□□□□ -2
Cthrc1Q9D1D6 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.58□□□□□ -2
Cthrc1Q9D1D6 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.58□□□□□ -2
Cthrc1Q9D1D6 Gm25625-201ENSMUST00000157221 96 ntBASIC2.58□□□□□ -2
Cthrc1Q9D1D6 Gm25280-201ENSMUST00000157269 101 ntBASIC2.58□□□□□ -2
Cthrc1Q9D1D6 Gm22215-201ENSMUST00000157558 96 ntBASIC2.58□□□□□ -2
Cthrc1Q9D1D6 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.58□□□□□ -2
Cthrc1Q9D1D6 Gm17067-202ENSMUST00000180131 123 ntBASIC2.58□□□□□ -2
Cthrc1Q9D1D6 Mir7242-201ENSMUST00000183710 79 ntBASIC2.58□□□□□ -2
Cthrc1Q9D1D6 Gm27421-201ENSMUST00000184729 167 ntBASIC2.58□□□□□ -2
Cthrc1Q9D1D6 Mir6540-201ENSMUST00000184886 108 ntBASIC2.58□□□□□ -2
Cthrc1Q9D1D6 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.58□□□□□ -2
Cthrc1Q9D1D6 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.58□□□□□ -2
Cthrc1Q9D1D6 Gm22978-201ENSMUST00000082607 160 ntBASIC2.58□□□□□ -2
Cthrc1Q9D1D6 Snord104-201ENSMUST00000083192 70 ntBASIC2.58□□□□□ -2
Cthrc1Q9D1D6 Gm24164-201ENSMUST00000093663 104 ntBASIC2.58□□□□□ -2
Cthrc1Q9D1D6 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Cthrc1Q9D1D6 AC164297.1-201ENSMUST00000224484 1561 ntBASIC2.57□□□□□ -2
Cthrc1Q9D1D6 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Cthrc1Q9D1D6 Gm23895-201ENSMUST00000158108 160 ntBASIC2.57□□□□□ -2
Cthrc1Q9D1D6 Gm24879-201ENSMUST00000158386 143 ntBASIC2.57□□□□□ -2
Cthrc1Q9D1D6 Gm25024-201ENSMUST00000179667 104 ntBASIC2.57□□□□□ -2
Cthrc1Q9D1D6 Gm28453-203ENSMUST00000187041 189 ntBASIC2.57□□□□□ -2
Cthrc1Q9D1D6 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC2.57□□□□□ -2
Cthrc1Q9D1D6 Gm29657-201ENSMUST00000189807 342 ntBASIC2.57□□□□□ -2
Cthrc1Q9D1D6 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC2.57□□□□□ -2
Cthrc1Q9D1D6 Gm44853-201ENSMUST00000209070 250 ntBASIC2.57□□□□□ -2
Cthrc1Q9D1D6 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.57□□□□□ -2
Cthrc1Q9D1D6 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.57□□□□□ -2
Cthrc1Q9D1D6 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.57□□□□□ -2
Cthrc1Q9D1D6 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.57□□□□□ -2
Cthrc1Q9D1D6 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
Cthrc1Q9D1D6 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.56□□□□□ -2
Cthrc1Q9D1D6 Gm23705-201ENSMUST00000104370 130 ntBASIC2.56□□□□□ -2
Cthrc1Q9D1D6 Gm23841-201ENSMUST00000116951 114 ntBASIC2.56□□□□□ -2
Cthrc1Q9D1D6 Gm12417-201ENSMUST00000119153 403 ntBASIC2.56□□□□□ -2
Cthrc1Q9D1D6 Gm23892-201ENSMUST00000158105 130 ntBASIC2.56□□□□□ -2
Cthrc1Q9D1D6 Gm23219-201ENSMUST00000158123 87 ntBASIC2.56□□□□□ -2
Cthrc1Q9D1D6 Gm24392-201ENSMUST00000158136 103 ntBASIC2.56□□□□□ -2
Cthrc1Q9D1D6 Gm24006-201ENSMUST00000158462 132 ntBASIC2.56□□□□□ -2
Cthrc1Q9D1D6 Gm24667-201ENSMUST00000158938 103 ntBASIC2.56□□□□□ -2
Cthrc1Q9D1D6 Gm27271-201ENSMUST00000183509 170 ntBASIC2.56□□□□□ -2
Cthrc1Q9D1D6 Gm27330-201ENSMUST00000184689 132 ntBASIC2.56□□□□□ -2
Cthrc1Q9D1D6 Ighv12-2-201ENSMUST00000191949 362 ntBASIC2.56□□□□□ -2
Cthrc1Q9D1D6 Gm44903-201ENSMUST00000206840 130 ntBASIC2.56□□□□□ -2
Cthrc1Q9D1D6 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.56□□□□□ -2
Cthrc1Q9D1D6 Gm25482-201ENSMUST00000083225 107 ntBASIC2.56□□□□□ -2
Cthrc1Q9D1D6 Gm23040-201ENSMUST00000083869 163 ntBASIC2.56□□□□□ -2
Cthrc1Q9D1D6 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC2.56□□□□□ -2
Cthrc1Q9D1D6 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC2.55□□□□□ -2
Cthrc1Q9D1D6 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Mir1195-201ENSMUST00000116818 98 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Gm12351-201ENSMUST00000118727 292 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Gm15162-201ENSMUST00000119325 283 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Gm3788-201ENSMUST00000119949 136 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Gm14215-201ENSMUST00000120578 221 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Gm15365-201ENSMUST00000122392 300 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Gm24594-201ENSMUST00000122502 99 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Gm25270-201ENSMUST00000122606 138 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Gm22330-201ENSMUST00000158068 115 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Gm24681-201ENSMUST00000158760 107 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Gm6788-201ENSMUST00000166459 270 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Gm23268-201ENSMUST00000175494 78 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Gm25528-201ENSMUST00000180264 132 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Gm19257-201ENSMUST00000186121 183 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Gm28647-201ENSMUST00000188416 197 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Gm6801-201ENSMUST00000190697 339 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Trbv18-201ENSMUST00000194256 294 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Gm44024-201ENSMUST00000203008 476 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Gm34314-201ENSMUST00000203622 367 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Cthrc1Q9D1D6 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.55□□□□□ -2
Cthrc1Q9D1D6 CT954323.1-201ENSMUST00000222774 229 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.55□□□□□ -2
Cthrc1Q9D1D6 Gm26265-201ENSMUST00000083277 135 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms