Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Ddx56Q9D0R4 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Ddx56Q9D0R4 Mir1193-201ENSMUST00000116761 121 ntBASIC2.81□□□□□ -1.96
Ddx56Q9D0R4 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.81□□□□□ -1.96
Ddx56Q9D0R4 Gm15002-201ENSMUST00000118406 452 ntBASIC2.81□□□□□ -1.96
Ddx56Q9D0R4 Gm11794-201ENSMUST00000119446 237 ntBASIC2.81□□□□□ -1.96
Ddx56Q9D0R4 Gm12042-201ENSMUST00000120479 301 ntBASIC2.81□□□□□ -1.96
Ddx56Q9D0R4 Gm23535-201ENSMUST00000157542 106 ntBASIC2.81□□□□□ -1.96
Ddx56Q9D0R4 Gm22215-201ENSMUST00000157558 96 ntBASIC2.81□□□□□ -1.96
Ddx56Q9D0R4 Gm24291-201ENSMUST00000157633 162 ntBASIC2.81□□□□□ -1.96
Ddx56Q9D0R4 Gm38060-201ENSMUST00000194822 464 ntBASIC2.81□□□□□ -1.96
Ddx56Q9D0R4 Gm34314-201ENSMUST00000203622 367 ntBASIC2.81□□□□□ -1.96
Ddx56Q9D0R4 Gm18346-201ENSMUST00000216782 325 ntBASIC2.81□□□□□ -1.96
Ddx56Q9D0R4 Gm5899-201ENSMUST00000071770 270 ntBASIC2.81□□□□□ -1.96
Ddx56Q9D0R4 Gm26107-201ENSMUST00000083972 107 ntBASIC2.81□□□□□ -1.96
Ddx56Q9D0R4 Gm24163-201ENSMUST00000093660 132 ntBASIC2.81□□□□□ -1.96
Ddx56Q9D0R4 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Ddx56Q9D0R4 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Ddx56Q9D0R4 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Ddx56Q9D0R4 Gm23128-201ENSMUST00000104257 132 ntBASIC2.8□□□□□ -1.96
Ddx56Q9D0R4 Gm24982-201ENSMUST00000104456 132 ntBASIC2.8□□□□□ -1.96
Ddx56Q9D0R4 Gm11285-201ENSMUST00000118443 322 ntBASIC2.8□□□□□ -1.96
Ddx56Q9D0R4 Gm13711-201ENSMUST00000119708 453 ntBASIC2.8□□□□□ -1.96
Ddx56Q9D0R4 Gm22027-201ENSMUST00000122737 127 ntBASIC2.8□□□□□ -1.96
Ddx56Q9D0R4 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.8□□□□□ -1.96
Ddx56Q9D0R4 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.8□□□□□ -1.96
Ddx56Q9D0R4 Gm23983-201ENSMUST00000157142 114 ntBASIC2.8□□□□□ -1.96
Ddx56Q9D0R4 Gm22281-201ENSMUST00000157198 103 ntBASIC2.8□□□□□ -1.96
Ddx56Q9D0R4 Gm23668-201ENSMUST00000157465 111 ntBASIC2.8□□□□□ -1.96
Ddx56Q9D0R4 Gm22537-201ENSMUST00000158172 199 ntBASIC2.8□□□□□ -1.96
Ddx56Q9D0R4 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.8□□□□□ -1.96
Ddx56Q9D0R4 Gm19257-201ENSMUST00000186121 183 ntBASIC2.8□□□□□ -1.96
Ddx56Q9D0R4 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Ddx56Q9D0R4 Gm23128-202ENSMUST00000196578 133 ntBASIC2.8□□□□□ -1.96
Ddx56Q9D0R4 Gm24164-201ENSMUST00000093663 104 ntBASIC2.8□□□□□ -1.96
Ddx56Q9D0R4 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
Ddx56Q9D0R4 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ddx56Q9D0R4 Gm26479-201ENSMUST00000122620 106 ntBASIC2.79□□□□□ -1.96
Ddx56Q9D0R4 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.79□□□□□ -1.96
Ddx56Q9D0R4 Gm25528-201ENSMUST00000180264 132 ntBASIC2.79□□□□□ -1.96
Ddx56Q9D0R4 Gm37807-201ENSMUST00000194310 190 ntBASIC2.79□□□□□ -1.96
Ddx56Q9D0R4 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Ddx56Q9D0R4 Mir3961-201ENSMUST00000198795 59 ntBASIC2.79□□□□□ -1.96
Ddx56Q9D0R4 Gm45543-201ENSMUST00000209327 88 ntBASIC2.79□□□□□ -1.96
Ddx56Q9D0R4 AC163033.1-201ENSMUST00000218608 157 ntBASIC2.79□□□□□ -1.96
Ddx56Q9D0R4 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.79□□□□□ -1.96
Ddx56Q9D0R4 mt-Td-201ENSMUST00000082404 70 ntBASIC2.79□□□□□ -1.96
Ddx56Q9D0R4 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Ddx56Q9D0R4 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.78□□□□□ -1.96
Ddx56Q9D0R4 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
Ddx56Q9D0R4 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Ddx56Q9D0R4 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Ddx56Q9D0R4 Gm12143-201ENSMUST00000119666 332 ntBASIC2.78□□□□□ -1.96
Ddx56Q9D0R4 Mir7047-201ENSMUST00000184595 64 ntBASIC2.78□□□□□ -1.96
Ddx56Q9D0R4 Gm37918-201ENSMUST00000192071 120 ntBASIC2.78□□□□□ -1.96
Ddx56Q9D0R4 Igkv15-102-201ENSMUST00000197885 287 ntBASIC2.78□□□□□ -1.96
Ddx56Q9D0R4 Gm43220-201ENSMUST00000199299 282 ntBASIC2.78□□□□□ -1.96
Ddx56Q9D0R4 Gm44055-201ENSMUST00000204376 247 ntBASIC2.78□□□□□ -1.96
Ddx56Q9D0R4 Gm44533-201ENSMUST00000207782 268 ntBASIC2.78□□□□□ -1.96
Ddx56Q9D0R4 AC134860.6-201ENSMUST00000226038 285 ntBASIC2.78□□□□□ -1.96
Ddx56Q9D0R4 Gm24355-201ENSMUST00000082858 122 ntBASIC2.78□□□□□ -1.96
Ddx56Q9D0R4 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.97
Ddx56Q9D0R4 Gm23015-201ENSMUST00000104145 128 ntBASIC2.77□□□□□ -1.97
Ddx56Q9D0R4 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Ddx56Q9D0R4 Gm22321-201ENSMUST00000157152 104 ntBASIC2.77□□□□□ -1.97
Ddx56Q9D0R4 Gm22315-201ENSMUST00000158010 143 ntBASIC2.77□□□□□ -1.97
Ddx56Q9D0R4 Gm26215-201ENSMUST00000158584 139 ntBASIC2.77□□□□□ -1.97
Ddx56Q9D0R4 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Ddx56Q9D0R4 Gm44256-201ENSMUST00000203304 335 ntBASIC2.77□□□□□ -1.97
Ddx56Q9D0R4 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC2.77□□□□□ -1.97
Ddx56Q9D0R4 Gm45456-201ENSMUST00000210841 243 ntBASIC2.77□□□□□ -1.97
Ddx56Q9D0R4 Gm7214-201ENSMUST00000222428 272 ntBASIC2.77□□□□□ -1.97
Ddx56Q9D0R4 Gm43706-201ENSMUST00000198767 2652 ntBASIC2.77□□□□□ -1.97
Ddx56Q9D0R4 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.77□□□□□ -1.97
Ddx56Q9D0R4 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
Ddx56Q9D0R4 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Ddx56Q9D0R4 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Ddx56Q9D0R4 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Ddx56Q9D0R4 Gm25875-201ENSMUST00000104323 107 ntBASIC2.76□□□□□ -1.97
Ddx56Q9D0R4 Gm13714-201ENSMUST00000117313 221 ntBASIC2.76□□□□□ -1.97
Ddx56Q9D0R4 Gm26411-201ENSMUST00000157668 107 ntBASIC2.76□□□□□ -1.97
Ddx56Q9D0R4 Gm25362-201ENSMUST00000158854 105 ntBASIC2.76□□□□□ -1.97
Ddx56Q9D0R4 Gm20438-201ENSMUST00000174441 329 ntBASIC2.76□□□□□ -1.97
Ddx56Q9D0R4 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC2.76□□□□□ -1.97
Ddx56Q9D0R4 Gm26435-201ENSMUST00000179026 107 ntBASIC2.76□□□□□ -1.97
Ddx56Q9D0R4 Gm27747-201ENSMUST00000184707 85 ntBASIC2.76□□□□□ -1.97
Ddx56Q9D0R4 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.76□□□□□ -1.97
Ddx56Q9D0R4 Gm32175-201ENSMUST00000193641 346 ntBASIC2.76□□□□□ -1.97
Ddx56Q9D0R4 Gm18546-201ENSMUST00000197245 676 ntBASIC2.76□□□□□ -1.97
Ddx56Q9D0R4 Gm42672-201ENSMUST00000197821 352 ntBASIC2.76□□□□□ -1.97
Ddx56Q9D0R4 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.76□□□□□ -1.97
Ddx56Q9D0R4 Gm24615-201ENSMUST00000083268 113 ntBASIC2.76□□□□□ -1.97
Ddx56Q9D0R4 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Ddx56Q9D0R4 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.76□□□□□ -1.97
Ddx56Q9D0R4 Gm15379-201ENSMUST00000121224 648 ntBASIC2.75□□□□□ -1.97
Ddx56Q9D0R4 Gm22731-201ENSMUST00000158086 94 ntBASIC2.75□□□□□ -1.97
Ddx56Q9D0R4 Gm26157-201ENSMUST00000158974 126 ntBASIC2.75□□□□□ -1.97
Ddx56Q9D0R4 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Ddx56Q9D0R4 Gm22118-201ENSMUST00000175593 171 ntBASIC2.75□□□□□ -1.97
Ddx56Q9D0R4 Gm23003-201ENSMUST00000179948 107 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 133.5 ms