Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Gm24125-201ENSMUST00000104105 137 ntBASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Gm23320-201ENSMUST00000104462 127 ntBASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Gm15214-201ENSMUST00000122155 470 ntBASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Gm16533-201ENSMUST00000140035 228 ntBASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Gm22961-201ENSMUST00000157964 106 ntBASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Gm25267-201ENSMUST00000158522 63 ntBASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Gm17522-201ENSMUST00000178144 498 ntBASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Mir7074-201ENSMUST00000183884 63 ntBASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Mir129b-201ENSMUST00000197461 65 ntBASIC3.14□□□□□ -1.91
Ssu72Q9CY97 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.14□□□□□ -1.91
Ssu72Q9CY97 CT030645.1-201ENSMUST00000224020 231 ntBASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Gm24625-201ENSMUST00000082622 130 ntBASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Gm22304-201ENSMUST00000082688 129 ntBASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Gm26456-201ENSMUST00000082831 111 ntBASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Gm23947-201ENSMUST00000093636 107 ntBASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ssu72Q9CY97 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.13□□□□□ -1.91
Ssu72Q9CY97 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Ssu72Q9CY97 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.13□□□□□ -1.91
Ssu72Q9CY97 Gm25938-201ENSMUST00000104139 166 ntBASIC3.13□□□□□ -1.91
Ssu72Q9CY97 Gm14448-201ENSMUST00000116383 210 ntBASIC3.13□□□□□ -1.91
Ssu72Q9CY97 Gm9119-201ENSMUST00000118866 495 ntBASIC3.13□□□□□ -1.91
Ssu72Q9CY97 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.13□□□□□ -1.91
Ssu72Q9CY97 Gm15466-201ENSMUST00000122299 333 ntBASIC3.13□□□□□ -1.91
Ssu72Q9CY97 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.13□□□□□ -1.91
Ssu72Q9CY97 Gm26020-201ENSMUST00000122729 183 ntBASIC3.13□□□□□ -1.91
Ssu72Q9CY97 Gm22722-201ENSMUST00000157467 132 ntBASIC3.13□□□□□ -1.91
Ssu72Q9CY97 Gm22833-201ENSMUST00000158292 132 ntBASIC3.13□□□□□ -1.91
Ssu72Q9CY97 Gm24811-201ENSMUST00000175313 100 ntBASIC3.13□□□□□ -1.91
Ssu72Q9CY97 Gm25464-201ENSMUST00000175481 107 ntBASIC3.13□□□□□ -1.91
Ssu72Q9CY97 Gm46233-201ENSMUST00000217831 449 ntBASIC3.13□□□□□ -1.91
Ssu72Q9CY97 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.13□□□□□ -1.91
Ssu72Q9CY97 Gm24449-201ENSMUST00000083985 106 ntBASIC3.13□□□□□ -1.91
Ssu72Q9CY97 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ssu72Q9CY97 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
Ssu72Q9CY97 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ssu72Q9CY97 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ssu72Q9CY97 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.12□□□□□ -1.91
Ssu72Q9CY97 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ssu72Q9CY97 Gm24936-201ENSMUST00000122598 247 ntBASIC3.12□□□□□ -1.91
Ssu72Q9CY97 Gm22527-201ENSMUST00000158816 106 ntBASIC3.12□□□□□ -1.91
Ssu72Q9CY97 Gm23337-201ENSMUST00000158959 118 ntBASIC3.12□□□□□ -1.91
Ssu72Q9CY97 Mir6402-201ENSMUST00000183406 80 ntBASIC3.12□□□□□ -1.91
Ssu72Q9CY97 Gm27921-201ENSMUST00000183968 108 ntBASIC3.12□□□□□ -1.91
Ssu72Q9CY97 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.12□□□□□ -1.91
Ssu72Q9CY97 Gm37281-201ENSMUST00000192412 439 ntBASIC3.12□□□□□ -1.91
Ssu72Q9CY97 Gm38255-201ENSMUST00000194910 2996 ntBASIC3.12□□□□□ -1.91
Ssu72Q9CY97 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.12□□□□□ -1.91
Ssu72Q9CY97 Gm10172-201ENSMUST00000085929 558 ntBASIC3.12□□□□□ -1.91
Ssu72Q9CY97 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC3.12□□□□□ -1.91
Ssu72Q9CY97 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Ssu72Q9CY97 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Ssu72Q9CY97 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ssu72Q9CY97 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ssu72Q9CY97 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ssu72Q9CY97 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.11□□□□□ -1.91
Ssu72Q9CY97 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ssu72Q9CY97 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ssu72Q9CY97 Gm13761-201ENSMUST00000117238 807 ntBASIC3.11□□□□□ -1.91
Ssu72Q9CY97 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.11□□□□□ -1.91
Ssu72Q9CY97 Gm22789-201ENSMUST00000157884 130 ntBASIC3.11□□□□□ -1.91
Ssu72Q9CY97 Gm26061-201ENSMUST00000175584 108 ntBASIC3.11□□□□□ -1.91
Ssu72Q9CY97 Gm19898-201ENSMUST00000177490 251 ntBASIC3.11□□□□□ -1.91
Ssu72Q9CY97 AC114010.1-201ENSMUST00000222060 379 ntBASIC3.11□□□□□ -1.91
Ssu72Q9CY97 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ssu72Q9CY97 Gm6030-201ENSMUST00000078768 402 ntBASIC3.11□□□□□ -1.91
Ssu72Q9CY97 Mir340-201ENSMUST00000083483 98 ntBASIC3.11□□□□□ -1.91
Ssu72Q9CY97 Gm23040-201ENSMUST00000083869 163 ntBASIC3.11□□□□□ -1.91
Ssu72Q9CY97 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.11□□□□□ -1.91
Ssu72Q9CY97 AC159625.1-201ENSMUST00000220994 2625 ntBASIC3.11□□□□□ -1.91
Ssu72Q9CY97 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.11□□□□□ -1.91
Ssu72Q9CY97 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ssu72Q9CY97 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.1□□□□□ -1.91
Ssu72Q9CY97 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.1□□□□□ -1.91
Ssu72Q9CY97 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Ssu72Q9CY97 Snord89-201ENSMUST00000104516 110 ntBASIC3.1□□□□□ -1.91
Ssu72Q9CY97 Gm6025-201ENSMUST00000121517 201 ntBASIC3.1□□□□□ -1.91
Ssu72Q9CY97 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Ssu72Q9CY97 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.1□□□□□ -1.91
Ssu72Q9CY97 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.1□□□□□ -1.91
Ssu72Q9CY97 Gm22277-201ENSMUST00000157204 277 ntBASIC3.1□□□□□ -1.91
Ssu72Q9CY97 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.1□□□□□ -1.91
Ssu72Q9CY97 Gm37796-201ENSMUST00000195327 134 ntBASIC3.1□□□□□ -1.91
Ssu72Q9CY97 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.1□□□□□ -1.91
Ssu72Q9CY97 Gm10042-201ENSMUST00000079884 78 ntBASIC3.1□□□□□ -1.91
Ssu72Q9CY97 Gm22245-201ENSMUST00000082479 103 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 98.4 ms