Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.09□□□□□ -2.07
Ddx28Q9CWT6 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.09□□□□□ -2.08
Ddx28Q9CWT6 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.09□□□□□ -2.08
Ddx28Q9CWT6 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm24049-201ENSMUST00000102409 100 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm26402-201ENSMUST00000158499 113 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm23813-201ENSMUST00000175153 77 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Mir5624-201ENSMUST00000176635 61 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm22114-201ENSMUST00000177756 107 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm21827-201ENSMUST00000178247 423 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm27369-201ENSMUST00000185182 71 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm29512-201ENSMUST00000185544 315 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm28110-201ENSMUST00000185782 315 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm29057-201ENSMUST00000186468 315 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm29661-201ENSMUST00000186781 315 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm28737-201ENSMUST00000186808 315 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm29118-201ENSMUST00000186908 315 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm28433-201ENSMUST00000187085 315 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm28759-201ENSMUST00000187621 315 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm28831-201ENSMUST00000187739 315 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm28200-201ENSMUST00000187778 315 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm28752-201ENSMUST00000188340 315 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm29378-201ENSMUST00000188723 315 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm28569-201ENSMUST00000188748 315 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm28120-201ENSMUST00000188812 315 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm28369-201ENSMUST00000188993 315 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm29037-201ENSMUST00000189092 313 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm28909-201ENSMUST00000189406 315 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm28861-201ENSMUST00000189681 315 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm29180-201ENSMUST00000190003 315 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm29575-201ENSMUST00000190597 315 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm29469-201ENSMUST00000191448 315 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm37557-201ENSMUST00000191640 139 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm19901-201ENSMUST00000192191 495 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm24044-201ENSMUST00000083107 156 ntBASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.08□□□□□ -2.08
Ddx28Q9CWT6 Gm24274-201ENSMUST00000116787 124 ntBASIC2.07□□□□□ -2.08
Ddx28Q9CWT6 Gm14782-201ENSMUST00000120151 195 ntBASIC2.07□□□□□ -2.08
Ddx28Q9CWT6 Gm12926-201ENSMUST00000121158 409 ntBASIC2.07□□□□□ -2.08
Ddx28Q9CWT6 Gm12956-201ENSMUST00000122184 414 ntBASIC2.07□□□□□ -2.08
Ddx28Q9CWT6 Gm24937-201ENSMUST00000122597 134 ntBASIC2.07□□□□□ -2.08
Ddx28Q9CWT6 Gm24896-201ENSMUST00000122741 135 ntBASIC2.07□□□□□ -2.08
Ddx28Q9CWT6 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.07□□□□□ -2.08
Ddx28Q9CWT6 Gm16510-201ENSMUST00000153501 249 ntBASIC2.07□□□□□ -2.08
Ddx28Q9CWT6 Gm24358-201ENSMUST00000158424 288 ntBASIC2.07□□□□□ -2.08
Ddx28Q9CWT6 Gm22448-201ENSMUST00000179254 107 ntBASIC2.07□□□□□ -2.08
Ddx28Q9CWT6 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Ddx28Q9CWT6 Mir6376-201ENSMUST00000185149 131 ntBASIC2.07□□□□□ -2.08
Ddx28Q9CWT6 Gm26265-202ENSMUST00000196326 133 ntBASIC2.07□□□□□ -2.08
Ddx28Q9CWT6 Gm44256-201ENSMUST00000203304 335 ntBASIC2.07□□□□□ -2.08
Ddx28Q9CWT6 Gm44794-201ENSMUST00000206550 411 ntBASIC2.07□□□□□ -2.08
Ddx28Q9CWT6 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC2.07□□□□□ -2.08
Ddx28Q9CWT6 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.07□□□□□ -2.08
Ddx28Q9CWT6 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.07□□□□□ -2.08
Ddx28Q9CWT6 Gm25402-201ENSMUST00000082966 131 ntBASIC2.07□□□□□ -2.08
Ddx28Q9CWT6 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
Ddx28Q9CWT6 AC160115.1-201ENSMUST00000224678 1574 ntBASIC2.06□□□□□ -2.08
Ddx28Q9CWT6 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Ddx28Q9CWT6 Gm11572-201ENSMUST00000119164 120 ntBASIC2.06□□□□□ -2.08
Ddx28Q9CWT6 Gm13992-201ENSMUST00000120558 156 ntBASIC2.06□□□□□ -2.08
Ddx28Q9CWT6 Gm11786-201ENSMUST00000120799 155 ntBASIC2.06□□□□□ -2.08
Ddx28Q9CWT6 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.06□□□□□ -2.08
Ddx28Q9CWT6 Gm24770-201ENSMUST00000158505 92 ntBASIC2.06□□□□□ -2.08
Ddx28Q9CWT6 Gm24769-201ENSMUST00000158506 129 ntBASIC2.06□□□□□ -2.08
Ddx28Q9CWT6 Mir3103-201ENSMUST00000175474 67 ntBASIC2.06□□□□□ -2.08
Ddx28Q9CWT6 Gm29665-201ENSMUST00000191457 528 ntBASIC2.06□□□□□ -2.08
Ddx28Q9CWT6 Trbv7-201ENSMUST00000193339 402 ntBASIC2.06□□□□□ -2.08
Ddx28Q9CWT6 Gm44482-201ENSMUST00000199232 103 ntBASIC2.06□□□□□ -2.08
Ddx28Q9CWT6 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.06□□□□□ -2.08
Ddx28Q9CWT6 Gm44564-201ENSMUST00000207985 180 ntBASIC2.06□□□□□ -2.08
Ddx28Q9CWT6 Gm44666-201ENSMUST00000208544 391 ntBASIC2.06□□□□□ -2.08
Ddx28Q9CWT6 Gm6109-201ENSMUST00000223297 348 ntBASIC2.06□□□□□ -2.08
Ddx28Q9CWT6 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.06□□□□□ -2.08
Ddx28Q9CWT6 Gm24661-201ENSMUST00000083205 104 ntBASIC2.06□□□□□ -2.08
Ddx28Q9CWT6 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Ddx28Q9CWT6 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.06□□□□□ -2.08
Ddx28Q9CWT6 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Ddx28Q9CWT6 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.06□□□□□ -2.08
Ddx28Q9CWT6 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Ddx28Q9CWT6 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Ddx28Q9CWT6 Gm25529-201ENSMUST00000104850 92 ntBASIC2.05□□□□□ -2.08
Ddx28Q9CWT6 Gm15526-201ENSMUST00000112504 204 ntBASIC2.05□□□□□ -2.08
Ddx28Q9CWT6 Gm15215-201ENSMUST00000117773 489 ntBASIC2.05□□□□□ -2.08
Ddx28Q9CWT6 Gm12924-201ENSMUST00000121747 318 ntBASIC2.05□□□□□ -2.08
Ddx28Q9CWT6 Gm25805-201ENSMUST00000122788 108 ntBASIC2.05□□□□□ -2.08
Ddx28Q9CWT6 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Ddx28Q9CWT6 Gm27271-201ENSMUST00000183509 170 ntBASIC2.05□□□□□ -2.08
Ddx28Q9CWT6 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.05□□□□□ -2.08
Ddx28Q9CWT6 Gm29167-201ENSMUST00000190024 377 ntBASIC2.05□□□□□ -2.08
Ddx28Q9CWT6 Mir6925-201ENSMUST00000197857 70 ntBASIC2.05□□□□□ -2.08
Ddx28Q9CWT6 Mir7227-201ENSMUST00000200408 59 ntBASIC2.05□□□□□ -2.08
Ddx28Q9CWT6 Gm45013-201ENSMUST00000206883 178 ntBASIC2.05□□□□□ -2.08
Ddx28Q9CWT6 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.05□□□□□ -2.08
Ddx28Q9CWT6 Gm23406-201ENSMUST00000082537 122 ntBASIC2.05□□□□□ -2.08
Ddx28Q9CWT6 Gm23845-201ENSMUST00000083834 152 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms