Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Smc1aQ9CU62 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Smc1aQ9CU62 Gm25970-201ENSMUST00000157165 86 ntBASIC1.91□□□□□ -2.1
Smc1aQ9CU62 Gm22603-201ENSMUST00000157603 96 ntBASIC1.91□□□□□ -2.1
Smc1aQ9CU62 Gm20613-201ENSMUST00000175828 345 ntBASIC1.91□□□□□ -2.1
Smc1aQ9CU62 Gm9830-201ENSMUST00000178509 357 ntBASIC1.91□□□□□ -2.1
Smc1aQ9CU62 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Smc1aQ9CU62 Gm28211-201ENSMUST00000190920 315 ntBASIC1.91□□□□□ -2.1
Smc1aQ9CU62 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.91□□□□□ -2.1
Smc1aQ9CU62 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.91□□□□□ -2.1
Smc1aQ9CU62 Gm45403-201ENSMUST00000209453 276 ntBASIC1.91□□□□□ -2.1
Smc1aQ9CU62 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.91□□□□□ -2.1
Smc1aQ9CU62 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.91□□□□□ -2.1
Smc1aQ9CU62 Gm26066-201ENSMUST00000083385 109 ntBASIC1.91□□□□□ -2.1
Smc1aQ9CU62 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.1
Smc1aQ9CU62 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
Smc1aQ9CU62 Gm22761-201ENSMUST00000102278 96 ntBASIC1.9□□□□□ -2.11
Smc1aQ9CU62 Gm24338-201ENSMUST00000104205 127 ntBASIC1.9□□□□□ -2.11
Smc1aQ9CU62 Gm25269-201ENSMUST00000122601 104 ntBASIC1.9□□□□□ -2.11
Smc1aQ9CU62 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.9□□□□□ -2.11
Smc1aQ9CU62 Gm25486-201ENSMUST00000158726 63 ntBASIC1.9□□□□□ -2.11
Smc1aQ9CU62 Gm3027-201ENSMUST00000167579 451 ntBASIC1.9□□□□□ -2.11
Smc1aQ9CU62 Mir7093-201ENSMUST00000184195 101 ntBASIC1.9□□□□□ -2.11
Smc1aQ9CU62 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.9□□□□□ -2.11
Smc1aQ9CU62 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Smc1aQ9CU62 Gm7495-201ENSMUST00000215099 426 ntBASIC1.9□□□□□ -2.11
Smc1aQ9CU62 Gm25589-201ENSMUST00000082502 166 ntBASIC1.9□□□□□ -2.11
Smc1aQ9CU62 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Smc1aQ9CU62 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Smc1aQ9CU62 Gm24896-201ENSMUST00000122741 135 ntBASIC1.89□□□□□ -2.11
Smc1aQ9CU62 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Smc1aQ9CU62 Gm27926-201ENSMUST00000157180 66 ntBASIC1.89□□□□□ -2.11
Smc1aQ9CU62 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Smc1aQ9CU62 Gm25956-201ENSMUST00000175115 217 ntBASIC1.89□□□□□ -2.11
Smc1aQ9CU62 Gm22308-201ENSMUST00000177609 107 ntBASIC1.89□□□□□ -2.11
Smc1aQ9CU62 Gm21737-201ENSMUST00000178112 664 ntBASIC1.89□□□□□ -2.11
Smc1aQ9CU62 Gm23186-201ENSMUST00000180078 107 ntBASIC1.89□□□□□ -2.11
Smc1aQ9CU62 Gm20901-201ENSMUST00000180177 664 ntBASIC1.89□□□□□ -2.11
Smc1aQ9CU62 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC1.89□□□□□ -2.11
Smc1aQ9CU62 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Smc1aQ9CU62 Gm28090-201ENSMUST00000189458 664 ntBASIC1.89□□□□□ -2.11
Smc1aQ9CU62 Gm21647-201ENSMUST00000189755 664 ntBASIC1.89□□□□□ -2.11
Smc1aQ9CU62 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.89□□□□□ -2.11
Smc1aQ9CU62 AC166358.7-201ENSMUST00000221132 108 ntBASIC1.89□□□□□ -2.11
Smc1aQ9CU62 AC125543.5-201ENSMUST00000222799 108 ntBASIC1.89□□□□□ -2.11
Smc1aQ9CU62 CT485612.2-201ENSMUST00000223014 151 ntBASIC1.89□□□□□ -2.11
Smc1aQ9CU62 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.89□□□□□ -2.11
Smc1aQ9CU62 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.89□□□□□ -2.11
Smc1aQ9CU62 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Smc1aQ9CU62 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.89□□□□□ -2.11
Smc1aQ9CU62 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Smc1aQ9CU62 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Smc1aQ9CU62 Gm22316-201ENSMUST00000158012 216 ntBASIC1.88□□□□□ -2.11
Smc1aQ9CU62 Gm20477-201ENSMUST00000174028 280 ntBASIC1.88□□□□□ -2.11
Smc1aQ9CU62 Gm24572-201ENSMUST00000175505 88 ntBASIC1.88□□□□□ -2.11
Smc1aQ9CU62 Gm23660-201ENSMUST00000178362 79 ntBASIC1.88□□□□□ -2.11
Smc1aQ9CU62 Gm24088-201ENSMUST00000179100 79 ntBASIC1.88□□□□□ -2.11
Smc1aQ9CU62 Mir8116-201ENSMUST00000184134 97 ntBASIC1.88□□□□□ -2.11
Smc1aQ9CU62 Gm38050-201ENSMUST00000191904 238 ntBASIC1.88□□□□□ -2.11
Smc1aQ9CU62 Gm44337-201ENSMUST00000196553 114 ntBASIC1.88□□□□□ -2.11
Smc1aQ9CU62 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.88□□□□□ -2.11
Smc1aQ9CU62 Gm26056-201ENSMUST00000083043 104 ntBASIC1.88□□□□□ -2.11
Smc1aQ9CU62 Gm26164-201ENSMUST00000083793 104 ntBASIC1.88□□□□□ -2.11
Smc1aQ9CU62 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Smc1aQ9CU62 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.88□□□□□ -2.11
Smc1aQ9CU62 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Smc1aQ9CU62 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.87□□□□□ -2.11
Smc1aQ9CU62 Mir701-201ENSMUST00000102208 109 ntBASIC1.87□□□□□ -2.11
Smc1aQ9CU62 Gm24079-201ENSMUST00000104352 132 ntBASIC1.87□□□□□ -2.11
Smc1aQ9CU62 Gm25333-201ENSMUST00000158035 246 ntBASIC1.87□□□□□ -2.11
Smc1aQ9CU62 Gm22665-201ENSMUST00000158720 275 ntBASIC1.87□□□□□ -2.11
Smc1aQ9CU62 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.87□□□□□ -2.11
Smc1aQ9CU62 Gm24085-201ENSMUST00000175172 116 ntBASIC1.87□□□□□ -2.11
Smc1aQ9CU62 Gm25035-201ENSMUST00000175414 77 ntBASIC1.87□□□□□ -2.11
Smc1aQ9CU62 Mir7241-201ENSMUST00000184532 64 ntBASIC1.87□□□□□ -2.11
Smc1aQ9CU62 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.87□□□□□ -2.11
Smc1aQ9CU62 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.87□□□□□ -2.11
Smc1aQ9CU62 Gm44149-201ENSMUST00000204256 226 ntBASIC1.87□□□□□ -2.11
Smc1aQ9CU62 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.87□□□□□ -2.11
Smc1aQ9CU62 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.87□□□□□ -2.11
Smc1aQ9CU62 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC1.87□□□□□ -2.11
Smc1aQ9CU62 Gm30155-201ENSMUST00000223458 339 ntBASIC1.87□□□□□ -2.11
Smc1aQ9CU62 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.87□□□□□ -2.11
Smc1aQ9CU62 Mir148b-201ENSMUST00000083626 97 ntBASIC1.87□□□□□ -2.11
Smc1aQ9CU62 Gm25896-201ENSMUST00000083713 136 ntBASIC1.87□□□□□ -2.11
Smc1aQ9CU62 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Smc1aQ9CU62 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Smc1aQ9CU62 Gm26080-201ENSMUST00000104069 131 ntBASIC1.86□□□□□ -2.11
Smc1aQ9CU62 Gm14296-202ENSMUST00000108931 750 ntBASIC1.86□□□□□ -2.11
Smc1aQ9CU62 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.86□□□□□ -2.11
Smc1aQ9CU62 Gm26004-201ENSMUST00000158804 116 ntBASIC1.86□□□□□ -2.11
Smc1aQ9CU62 Gm24222-201ENSMUST00000158834 93 ntBASIC1.86□□□□□ -2.11
Smc1aQ9CU62 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.86□□□□□ -2.11
Smc1aQ9CU62 Gm23267-201ENSMUST00000178490 132 ntBASIC1.86□□□□□ -2.11
Smc1aQ9CU62 Gm23714-201ENSMUST00000179259 105 ntBASIC1.86□□□□□ -2.11
Smc1aQ9CU62 Mir6351-201ENSMUST00000183826 99 ntBASIC1.86□□□□□ -2.11
Smc1aQ9CU62 Gm7654-201ENSMUST00000186738 683 ntBASIC1.86□□□□□ -2.11
Smc1aQ9CU62 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.86□□□□□ -2.11
Smc1aQ9CU62 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.86□□□□□ -2.11
Smc1aQ9CU62 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms