Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm3788-201ENSMUST00000119949 136 ntBASIC1.81□□□□□ -2.12
Ccdc43Q9CR29 Gm6956-201ENSMUST00000134724 546 ntBASIC1.81□□□□□ -2.12
Ccdc43Q9CR29 Rnu7-201ENSMUST00000158458 62 ntBASIC1.81□□□□□ -2.12
Ccdc43Q9CR29 Gm22664-201ENSMUST00000158719 105 ntBASIC1.81□□□□□ -2.12
Ccdc43Q9CR29 Gm28383-201ENSMUST00000187563 139 ntBASIC1.81□□□□□ -2.12
Ccdc43Q9CR29 Gm29262-201ENSMUST00000190084 196 ntBASIC1.81□□□□□ -2.12
Ccdc43Q9CR29 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.81□□□□□ -2.12
Ccdc43Q9CR29 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.81□□□□□ -2.12
Ccdc43Q9CR29 Gm24536-201ENSMUST00000083144 107 ntBASIC1.81□□□□□ -2.12
Ccdc43Q9CR29 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Ccdc43Q9CR29 Gm13475-201ENSMUST00000119290 234 ntBASIC1.8□□□□□ -2.12
Ccdc43Q9CR29 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.8□□□□□ -2.12
Ccdc43Q9CR29 Gm23022-201ENSMUST00000158768 180 ntBASIC1.8□□□□□ -2.12
Ccdc43Q9CR29 Gm26265-202ENSMUST00000196326 133 ntBASIC1.8□□□□□ -2.12
Ccdc43Q9CR29 AC116589.9-201ENSMUST00000221462 908 ntBASIC1.8□□□□□ -2.12
Ccdc43Q9CR29 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.8□□□□□ -2.12
Ccdc43Q9CR29 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Ccdc43Q9CR29 Gm25801-201ENSMUST00000082638 106 ntBASIC1.8□□□□□ -2.12
Ccdc43Q9CR29 Snora3-201ENSMUST00000083082 132 ntBASIC1.8□□□□□ -2.12
Ccdc43Q9CR29 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Ccdc43Q9CR29 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Ccdc43Q9CR29 Gm26474-201ENSMUST00000116762 122 ntBASIC1.79□□□□□ -2.12
Ccdc43Q9CR29 Gm13714-201ENSMUST00000117313 221 ntBASIC1.79□□□□□ -2.12
Ccdc43Q9CR29 Gm11606-201ENSMUST00000120706 617 ntBASIC1.79□□□□□ -2.12
Ccdc43Q9CR29 Gm26024-201ENSMUST00000158657 322 ntBASIC1.79□□□□□ -2.12
Ccdc43Q9CR29 Gm25836-201ENSMUST00000158918 123 ntBASIC1.79□□□□□ -2.12
Ccdc43Q9CR29 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.79□□□□□ -2.12
Ccdc43Q9CR29 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.79□□□□□ -2.12
Ccdc43Q9CR29 Gm25253-201ENSMUST00000179958 107 ntBASIC1.79□□□□□ -2.12
Ccdc43Q9CR29 Mir6406-201ENSMUST00000183592 120 ntBASIC1.79□□□□□ -2.12
Ccdc43Q9CR29 Gm27539-201ENSMUST00000184971 224 ntBASIC1.79□□□□□ -2.12
Ccdc43Q9CR29 AC167192.1-201ENSMUST00000225908 139 ntBASIC1.79□□□□□ -2.12
Ccdc43Q9CR29 Gm5899-201ENSMUST00000071770 270 ntBASIC1.79□□□□□ -2.12
Ccdc43Q9CR29 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
Ccdc43Q9CR29 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.79□□□□□ -2.12
Ccdc43Q9CR29 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
Ccdc43Q9CR29 Mir758-201ENSMUST00000103260 81 ntBASIC1.78□□□□□ -2.12
Ccdc43Q9CR29 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Ccdc43Q9CR29 Gm25541-201ENSMUST00000116888 126 ntBASIC1.78□□□□□ -2.12
Ccdc43Q9CR29 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.78□□□□□ -2.12
Ccdc43Q9CR29 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Ccdc43Q9CR29 Gm27236-201ENSMUST00000184147 442 ntBASIC1.78□□□□□ -2.12
Ccdc43Q9CR29 Gm27517-201ENSMUST00000184347 236 ntBASIC1.78□□□□□ -2.12
Ccdc43Q9CR29 Mir7017-201ENSMUST00000184894 62 ntBASIC1.78□□□□□ -2.12
Ccdc43Q9CR29 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.78□□□□□ -2.12
Ccdc43Q9CR29 Gm45456-201ENSMUST00000210841 243 ntBASIC1.78□□□□□ -2.12
Ccdc43Q9CR29 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.78□□□□□ -2.12
Ccdc43Q9CR29 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.78□□□□□ -2.12
Ccdc43Q9CR29 Gm26922-201ENSMUST00000082687 72 ntBASIC1.78□□□□□ -2.12
Ccdc43Q9CR29 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
Ccdc43Q9CR29 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Ccdc43Q9CR29 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Ccdc43Q9CR29 Gm14803-201ENSMUST00000117163 361 ntBASIC1.77□□□□□ -2.13
Ccdc43Q9CR29 Gm13439-201ENSMUST00000117541 409 ntBASIC1.77□□□□□ -2.13
Ccdc43Q9CR29 Gm22027-201ENSMUST00000122737 127 ntBASIC1.77□□□□□ -2.13
Ccdc43Q9CR29 Gm23535-201ENSMUST00000157542 106 ntBASIC1.77□□□□□ -2.13
Ccdc43Q9CR29 Gm25914-201ENSMUST00000157618 153 ntBASIC1.77□□□□□ -2.13
Ccdc43Q9CR29 Gm22555-201ENSMUST00000157801 62 ntBASIC1.77□□□□□ -2.13
Ccdc43Q9CR29 Gm22315-201ENSMUST00000158010 143 ntBASIC1.77□□□□□ -2.13
Ccdc43Q9CR29 Mir6351-201ENSMUST00000183826 99 ntBASIC1.77□□□□□ -2.13
Ccdc43Q9CR29 Gm38395-201ENSMUST00000199904 830 ntBASIC1.77□□□□□ -2.13
Ccdc43Q9CR29 Gm22723-201ENSMUST00000083820 129 ntBASIC1.77□□□□□ -2.13
Ccdc43Q9CR29 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC1.77□□□□□ -2.13
Ccdc43Q9CR29 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
Ccdc43Q9CR29 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.76□□□□□ -2.13
Ccdc43Q9CR29 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Ccdc43Q9CR29 Gm12433-201ENSMUST00000119659 255 ntBASIC1.76□□□□□ -2.13
Ccdc43Q9CR29 Gm14937-201ENSMUST00000119709 208 ntBASIC1.76□□□□□ -2.13
Ccdc43Q9CR29 Gm23656-201ENSMUST00000122626 112 ntBASIC1.76□□□□□ -2.13
Ccdc43Q9CR29 Gm26181-201ENSMUST00000157687 106 ntBASIC1.76□□□□□ -2.13
Ccdc43Q9CR29 Gm24677-201ENSMUST00000158755 150 ntBASIC1.76□□□□□ -2.13
Ccdc43Q9CR29 Gm3027-201ENSMUST00000167579 451 ntBASIC1.76□□□□□ -2.13
Ccdc43Q9CR29 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Ccdc43Q9CR29 Gm26435-201ENSMUST00000179026 107 ntBASIC1.76□□□□□ -2.13
Ccdc43Q9CR29 Gm25936-201ENSMUST00000179952 114 ntBASIC1.76□□□□□ -2.13
Ccdc43Q9CR29 Gm28912-201ENSMUST00000189001 234 ntBASIC1.76□□□□□ -2.13
Ccdc43Q9CR29 Gm37162-201ENSMUST00000191708 551 ntBASIC1.76□□□□□ -2.13
Ccdc43Q9CR29 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.76□□□□□ -2.13
Ccdc43Q9CR29 Gm44491-201ENSMUST00000196794 96 ntBASIC1.76□□□□□ -2.13
Ccdc43Q9CR29 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.76□□□□□ -2.13
Ccdc43Q9CR29 Gm35736-201ENSMUST00000203681 313 ntBASIC1.76□□□□□ -2.13
Ccdc43Q9CR29 Gm43993-201ENSMUST00000203972 247 ntBASIC1.76□□□□□ -2.13
Ccdc43Q9CR29 Gm24037-201ENSMUST00000082871 180 ntBASIC1.76□□□□□ -2.13
Ccdc43Q9CR29 Gm25579-201ENSMUST00000083407 106 ntBASIC1.76□□□□□ -2.13
Ccdc43Q9CR29 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.76□□□□□ -2.13
Ccdc43Q9CR29 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.75□□□□□ -2.13
Ccdc43Q9CR29 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Ccdc43Q9CR29 Mir872-201ENSMUST00000104728 81 ntBASIC1.75□□□□□ -2.13
Ccdc43Q9CR29 Gm11854-201ENSMUST00000117839 446 ntBASIC1.75□□□□□ -2.13
Ccdc43Q9CR29 Gm11862-201ENSMUST00000119678 659 ntBASIC1.75□□□□□ -2.13
Ccdc43Q9CR29 Gm13729-201ENSMUST00000120328 406 ntBASIC1.75□□□□□ -2.13
Ccdc43Q9CR29 Gm8121-201ENSMUST00000153583 499 ntBASIC1.75□□□□□ -2.13
Ccdc43Q9CR29 Gm23170-201ENSMUST00000157158 106 ntBASIC1.75□□□□□ -2.13
Ccdc43Q9CR29 Gm24177-201ENSMUST00000158927 131 ntBASIC1.75□□□□□ -2.13
Ccdc43Q9CR29 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.75□□□□□ -2.13
Ccdc43Q9CR29 Gm28453-203ENSMUST00000187041 189 ntBASIC1.75□□□□□ -2.13
Ccdc43Q9CR29 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.75□□□□□ -2.13
Ccdc43Q9CR29 Gm43512-201ENSMUST00000198495 176 ntBASIC1.75□□□□□ -2.13
Ccdc43Q9CR29 Gm44654-201ENSMUST00000208052 329 ntBASIC1.75□□□□□ -2.13
Ccdc43Q9CR29 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 157.2 ms