Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm42862-201ENSMUST00000197494 2621 ntBASIC3.8□□□□□ -1.8
Trim11Q99PQ2 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.8□□□□□ -1.8
Trim11Q99PQ2 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Trim11Q99PQ2 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.79□□□□□ -1.8
Trim11Q99PQ2 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim11Q99PQ2 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Trim11Q99PQ2 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim11Q99PQ2 Snord64-201ENSMUST00000104003 67 ntBASIC3.79□□□□□ -1.8
Trim11Q99PQ2 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC3.79□□□□□ -1.8
Trim11Q99PQ2 Gm24634-201ENSMUST00000158672 107 ntBASIC3.79□□□□□ -1.8
Trim11Q99PQ2 Mir5136-201ENSMUST00000175573 76 ntBASIC3.79□□□□□ -1.8
Trim11Q99PQ2 Gm25817-201ENSMUST00000177758 121 ntBASIC3.79□□□□□ -1.8
Trim11Q99PQ2 Gm22910-201ENSMUST00000178568 132 ntBASIC3.79□□□□□ -1.8
Trim11Q99PQ2 Gm24766-201ENSMUST00000179182 121 ntBASIC3.79□□□□□ -1.8
Trim11Q99PQ2 Gm27648-201ENSMUST00000184315 107 ntBASIC3.79□□□□□ -1.8
Trim11Q99PQ2 Gm37097-201ENSMUST00000193676 336 ntBASIC3.79□□□□□ -1.8
Trim11Q99PQ2 Gm43587-201ENSMUST00000199590 204 ntBASIC3.79□□□□□ -1.8
Trim11Q99PQ2 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.79□□□□□ -1.8
Trim11Q99PQ2 Gm43898-201ENSMUST00000204456 424 ntBASIC3.79□□□□□ -1.8
Trim11Q99PQ2 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.79□□□□□ -1.8
Trim11Q99PQ2 Gm22248-201ENSMUST00000082482 150 ntBASIC3.79□□□□□ -1.8
Trim11Q99PQ2 Gm25797-201ENSMUST00000082640 107 ntBASIC3.79□□□□□ -1.8
Trim11Q99PQ2 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim11Q99PQ2 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.79□□□□□ -1.8
Trim11Q99PQ2 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Trim11Q99PQ2 Gm24232-201ENSMUST00000104314 132 ntBASIC3.78□□□□□ -1.8
Trim11Q99PQ2 Gm23772-201ENSMUST00000104433 102 ntBASIC3.78□□□□□ -1.8
Trim11Q99PQ2 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.78□□□□□ -1.8
Trim11Q99PQ2 Mir6399-201ENSMUST00000184050 84 ntBASIC3.78□□□□□ -1.8
Trim11Q99PQ2 Gm28825-201ENSMUST00000186233 238 ntBASIC3.78□□□□□ -1.8
Trim11Q99PQ2 Gm43676-201ENSMUST00000197532 540 ntBASIC3.78□□□□□ -1.8
Trim11Q99PQ2 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.78□□□□□ -1.8
Trim11Q99PQ2 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.78□□□□□ -1.8
Trim11Q99PQ2 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.78□□□□□ -1.8
Trim11Q99PQ2 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.78□□□□□ -1.8
Trim11Q99PQ2 Gm25789-201ENSMUST00000083294 76 ntBASIC3.78□□□□□ -1.8
Trim11Q99PQ2 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.78□□□□□ -1.8
Trim11Q99PQ2 Gm15120-201ENSMUST00000120602 301 ntBASIC3.77□□□□□ -1.81
Trim11Q99PQ2 Gm6025-201ENSMUST00000121517 201 ntBASIC3.77□□□□□ -1.81
Trim11Q99PQ2 Gm26104-201ENSMUST00000157250 108 ntBASIC3.77□□□□□ -1.81
Trim11Q99PQ2 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Trim11Q99PQ2 Gm43324-201ENSMUST00000197482 289 ntBASIC3.77□□□□□ -1.81
Trim11Q99PQ2 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.77□□□□□ -1.81
Trim11Q99PQ2 Gm23136-201ENSMUST00000083425 99 ntBASIC3.77□□□□□ -1.81
Trim11Q99PQ2 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Trim11Q99PQ2 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.77□□□□□ -1.81
Trim11Q99PQ2 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.77□□□□□ -1.81
Trim11Q99PQ2 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Trim11Q99PQ2 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.77□□□□□ -1.81
Trim11Q99PQ2 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Trim11Q99PQ2 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trim11Q99PQ2 Gm23230-201ENSMUST00000157298 133 ntBASIC3.76□□□□□ -1.81
Trim11Q99PQ2 Gm25427-201ENSMUST00000157605 103 ntBASIC3.76□□□□□ -1.81
Trim11Q99PQ2 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC3.76□□□□□ -1.81
Trim11Q99PQ2 Gm22055-201ENSMUST00000083388 107 ntBASIC3.76□□□□□ -1.81
Trim11Q99PQ2 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Trim11Q99PQ2 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.75□□□□□ -1.81
Trim11Q99PQ2 Gm26135-201ENSMUST00000101993 72 ntBASIC3.75□□□□□ -1.81
Trim11Q99PQ2 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.75□□□□□ -1.81
Trim11Q99PQ2 Gm22850-201ENSMUST00000157714 82 ntBASIC3.75□□□□□ -1.81
Trim11Q99PQ2 Gm23080-201ENSMUST00000157846 103 ntBASIC3.75□□□□□ -1.81
Trim11Q99PQ2 Snord50b-201ENSMUST00000178497 72 ntBASIC3.75□□□□□ -1.81
Trim11Q99PQ2 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC3.75□□□□□ -1.81
Trim11Q99PQ2 Trbv18-201ENSMUST00000194256 294 ntBASIC3.75□□□□□ -1.81
Trim11Q99PQ2 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.75□□□□□ -1.81
Trim11Q99PQ2 Gm45245-201ENSMUST00000210082 376 ntBASIC3.75□□□□□ -1.81
Trim11Q99PQ2 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.75□□□□□ -1.81
Trim11Q99PQ2 AC122834.1-201ENSMUST00000227182 425 ntBASIC3.75□□□□□ -1.81
Trim11Q99PQ2 Gm23736-201ENSMUST00000082553 75 ntBASIC3.75□□□□□ -1.81
Trim11Q99PQ2 Gm25851-201ENSMUST00000082794 107 ntBASIC3.75□□□□□ -1.81
Trim11Q99PQ2 Gm15314-201ENSMUST00000120740 1887 ntBASIC3.75□□□□□ -1.81
Trim11Q99PQ2 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.75□□□□□ -1.81
Trim11Q99PQ2 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Trim11Q99PQ2 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.74□□□□□ -1.81
Trim11Q99PQ2 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Trim11Q99PQ2 Gm44114-201ENSMUST00000203270 2727 ntBASIC3.74□□□□□ -1.81
Trim11Q99PQ2 Gm26423-201ENSMUST00000104277 128 ntBASIC3.74□□□□□ -1.81
Trim11Q99PQ2 Gm23530-201ENSMUST00000104564 137 ntBASIC3.74□□□□□ -1.81
Trim11Q99PQ2 Gm22071-201ENSMUST00000116857 83 ntBASIC3.74□□□□□ -1.81
Trim11Q99PQ2 Gm24936-201ENSMUST00000122598 247 ntBASIC3.74□□□□□ -1.81
Trim11Q99PQ2 Gm25623-201ENSMUST00000157216 108 ntBASIC3.74□□□□□ -1.81
Trim11Q99PQ2 Gm22586-201ENSMUST00000157507 122 ntBASIC3.74□□□□□ -1.81
Trim11Q99PQ2 Gm24745-201ENSMUST00000157840 85 ntBASIC3.74□□□□□ -1.81
Trim11Q99PQ2 Gm26360-201ENSMUST00000158872 103 ntBASIC3.74□□□□□ -1.81
Trim11Q99PQ2 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC3.74□□□□□ -1.81
Trim11Q99PQ2 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.74□□□□□ -1.81
Trim11Q99PQ2 Gm42834-201ENSMUST00000196845 256 ntBASIC3.74□□□□□ -1.81
Trim11Q99PQ2 Gm15235-201ENSMUST00000200572 194 ntBASIC3.74□□□□□ -1.81
Trim11Q99PQ2 Gm43264-201ENSMUST00000202284 325 ntBASIC3.74□□□□□ -1.81
Trim11Q99PQ2 Gm22978-201ENSMUST00000082607 160 ntBASIC3.74□□□□□ -1.81
Trim11Q99PQ2 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Trim11Q99PQ2 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Trim11Q99PQ2 AC159625.1-201ENSMUST00000220994 2625 ntBASIC3.74□□□□□ -1.81
Trim11Q99PQ2 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Trim11Q99PQ2 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.73□□□□□ -1.81
Trim11Q99PQ2 Gm14536-201ENSMUST00000118324 138 ntBASIC3.73□□□□□ -1.81
Trim11Q99PQ2 Gm15027-201ENSMUST00000120922 138 ntBASIC3.73□□□□□ -1.81
Trim11Q99PQ2 Gm23655-201ENSMUST00000122627 105 ntBASIC3.73□□□□□ -1.81
Trim11Q99PQ2 Gm23886-201ENSMUST00000122684 313 ntBASIC3.73□□□□□ -1.81
Trim11Q99PQ2 Gm25060-201ENSMUST00000157374 130 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 113.8 ms