Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm44726-201ENSMUST00000203427 217 ntBASIC1.63□□□□□ -2.15
Sf3b1Q99NB9 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.63□□□□□ -2.15
Sf3b1Q99NB9 Gm45815-201ENSMUST00000220241 146 ntBASIC1.63□□□□□ -2.15
Sf3b1Q99NB9 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Sf3b1Q99NB9 Gm24805-201ENSMUST00000082931 104 ntBASIC1.63□□□□□ -2.15
Sf3b1Q99NB9 Gm14674-201ENSMUST00000117816 342 ntBASIC1.62□□□□□ -2.15
Sf3b1Q99NB9 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.62□□□□□ -2.15
Sf3b1Q99NB9 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.62□□□□□ -2.15
Sf3b1Q99NB9 Gm22555-201ENSMUST00000157801 62 ntBASIC1.62□□□□□ -2.15
Sf3b1Q99NB9 Gm24726-201ENSMUST00000158232 121 ntBASIC1.62□□□□□ -2.15
Sf3b1Q99NB9 Gm22136-201ENSMUST00000158751 268 ntBASIC1.62□□□□□ -2.15
Sf3b1Q99NB9 Gm16038-201ENSMUST00000159317 193 ntBASIC1.62□□□□□ -2.15
Sf3b1Q99NB9 Cfap61-214ENSMUST00000167179 183 ntBASIC1.62□□□□□ -2.15
Sf3b1Q99NB9 Gm23967-201ENSMUST00000175062 78 ntBASIC1.62□□□□□ -2.15
Sf3b1Q99NB9 Gm27236-201ENSMUST00000184147 442 ntBASIC1.62□□□□□ -2.15
Sf3b1Q99NB9 Gm36891-201ENSMUST00000191995 655 ntBASIC1.62□□□□□ -2.15
Sf3b1Q99NB9 Gm45754-201ENSMUST00000212380 279 ntBASIC1.62□□□□□ -2.15
Sf3b1Q99NB9 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.62□□□□□ -2.15
Sf3b1Q99NB9 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Sf3b1Q99NB9 Gm22972-201ENSMUST00000083297 131 ntBASIC1.62□□□□□ -2.15
Sf3b1Q99NB9 Mir410-201ENSMUST00000083563 81 ntBASIC1.62□□□□□ -2.15
Sf3b1Q99NB9 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Sf3b1Q99NB9 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Sf3b1Q99NB9 Gm22656-201ENSMUST00000104199 171 ntBASIC1.61□□□□□ -2.15
Sf3b1Q99NB9 Gm22221-201ENSMUST00000157362 103 ntBASIC1.61□□□□□ -2.15
Sf3b1Q99NB9 Gm26004-201ENSMUST00000158804 116 ntBASIC1.61□□□□□ -2.15
Sf3b1Q99NB9 Gm22510-201ENSMUST00000179304 79 ntBASIC1.61□□□□□ -2.15
Sf3b1Q99NB9 Gm26336-201ENSMUST00000179449 79 ntBASIC1.61□□□□□ -2.15
Sf3b1Q99NB9 Gm26390-201ENSMUST00000179628 79 ntBASIC1.61□□□□□ -2.15
Sf3b1Q99NB9 Gm22263-201ENSMUST00000180060 104 ntBASIC1.61□□□□□ -2.15
Sf3b1Q99NB9 Gm27265-201ENSMUST00000183559 77 ntBASIC1.61□□□□□ -2.15
Sf3b1Q99NB9 Gm28848-201ENSMUST00000189984 168 ntBASIC1.61□□□□□ -2.15
Sf3b1Q99NB9 AC116589.3-202ENSMUST00000221770 649 ntBASIC1.61□□□□□ -2.15
Sf3b1Q99NB9 AC116589.6-201ENSMUST00000222252 649 ntBASIC1.61□□□□□ -2.15
Sf3b1Q99NB9 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.61□□□□□ -2.15
Sf3b1Q99NB9 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.61□□□□□ -2.15
Sf3b1Q99NB9 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Sf3b1Q99NB9 Gm26314-201ENSMUST00000083891 107 ntBASIC1.61□□□□□ -2.15
Sf3b1Q99NB9 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.61□□□□□ -2.15
Sf3b1Q99NB9 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.6□□□□□ -2.15
Sf3b1Q99NB9 Mir374b-201ENSMUST00000102314 95 ntBASIC1.6□□□□□ -2.15
Sf3b1Q99NB9 Gm22193-201ENSMUST00000116868 76 ntBASIC1.6□□□□□ -2.15
Sf3b1Q99NB9 Gm25543-201ENSMUST00000122678 312 ntBASIC1.6□□□□□ -2.15
Sf3b1Q99NB9 Gm26401-201ENSMUST00000158502 76 ntBASIC1.6□□□□□ -2.15
Sf3b1Q99NB9 Gm22075-201ENSMUST00000158599 192 ntBASIC1.6□□□□□ -2.15
Sf3b1Q99NB9 Gm24085-201ENSMUST00000175172 116 ntBASIC1.6□□□□□ -2.15
Sf3b1Q99NB9 Gm23090-201ENSMUST00000177331 78 ntBASIC1.6□□□□□ -2.15
Sf3b1Q99NB9 Mir7683-201ENSMUST00000183842 61 ntBASIC1.6□□□□□ -2.15
Sf3b1Q99NB9 Mir6388-201ENSMUST00000184417 75 ntBASIC1.6□□□□□ -2.15
Sf3b1Q99NB9 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.6□□□□□ -2.15
Sf3b1Q99NB9 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1.6□□□□□ -2.15
Sf3b1Q99NB9 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.6□□□□□ -2.15
Sf3b1Q99NB9 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.6□□□□□ -2.15
Sf3b1Q99NB9 Gm45403-201ENSMUST00000209453 276 ntBASIC1.6□□□□□ -2.15
Sf3b1Q99NB9 Gm45365-201ENSMUST00000209489 256 ntBASIC1.6□□□□□ -2.15
Sf3b1Q99NB9 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.6□□□□□ -2.15
Sf3b1Q99NB9 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Sf3b1Q99NB9 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm12512-201ENSMUST00000119620 217 ntBASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm23169-201ENSMUST00000157157 112 ntBASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm27926-201ENSMUST00000157180 66 ntBASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm23718-201ENSMUST00000157350 307 ntBASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm23558-201ENSMUST00000157823 80 ntBASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm25333-201ENSMUST00000158035 246 ntBASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm23714-201ENSMUST00000179259 105 ntBASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm27539-201ENSMUST00000184971 224 ntBASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm44384-201ENSMUST00000200208 114 ntBASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm43578-201ENSMUST00000201250 459 ntBASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.59□□□□□ -2.16
Sf3b1Q99NB9 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.58□□□□□ -2.16
Sf3b1Q99NB9 Mir873a-201ENSMUST00000104863 77 ntBASIC1.58□□□□□ -2.16
Sf3b1Q99NB9 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Sf3b1Q99NB9 Gm26249-201ENSMUST00000116708 118 ntBASIC1.58□□□□□ -2.16
Sf3b1Q99NB9 Gm12351-201ENSMUST00000118727 292 ntBASIC1.58□□□□□ -2.16
Sf3b1Q99NB9 Gm13475-201ENSMUST00000119290 234 ntBASIC1.58□□□□□ -2.16
Sf3b1Q99NB9 Gm12433-201ENSMUST00000119659 255 ntBASIC1.58□□□□□ -2.16
Sf3b1Q99NB9 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.58□□□□□ -2.16
Sf3b1Q99NB9 Gm24005-201ENSMUST00000158459 296 ntBASIC1.58□□□□□ -2.16
Sf3b1Q99NB9 Gm25035-201ENSMUST00000175414 77 ntBASIC1.58□□□□□ -2.16
Sf3b1Q99NB9 Gm25730-201ENSMUST00000178753 165 ntBASIC1.58□□□□□ -2.16
Sf3b1Q99NB9 Gm27326-201ENSMUST00000183504 95 ntBASIC1.58□□□□□ -2.16
Sf3b1Q99NB9 Gm37128-201ENSMUST00000192599 232 ntBASIC1.58□□□□□ -2.16
Sf3b1Q99NB9 Gm7495-201ENSMUST00000215099 426 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms