Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm26175-201ENSMUST00000083794 131 ntBASIC1.68□□□□□ -2.14
Cstf1Q99LC2 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Cstf1Q99LC2 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Cstf1Q99LC2 Gm24896-201ENSMUST00000122741 135 ntBASIC1.67□□□□□ -2.14
Cstf1Q99LC2 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.67□□□□□ -2.14
Cstf1Q99LC2 Gm22555-201ENSMUST00000157801 62 ntBASIC1.67□□□□□ -2.14
Cstf1Q99LC2 Gm25976-201ENSMUST00000158695 130 ntBASIC1.67□□□□□ -2.14
Cstf1Q99LC2 Gm25486-201ENSMUST00000158726 63 ntBASIC1.67□□□□□ -2.14
Cstf1Q99LC2 Snord87-201ENSMUST00000175437 87 ntBASIC1.67□□□□□ -2.14
Cstf1Q99LC2 Gm24656-201ENSMUST00000177548 132 ntBASIC1.67□□□□□ -2.14
Cstf1Q99LC2 Mir6379-201ENSMUST00000183392 115 ntBASIC1.67□□□□□ -2.14
Cstf1Q99LC2 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Cstf1Q99LC2 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.67□□□□□ -2.14
Cstf1Q99LC2 Gm8125-201ENSMUST00000216602 738 ntBASIC1.67□□□□□ -2.14
Cstf1Q99LC2 Gm25896-201ENSMUST00000083713 136 ntBASIC1.67□□□□□ -2.14
Cstf1Q99LC2 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Cstf1Q99LC2 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Cstf1Q99LC2 Gm25170-201ENSMUST00000104191 129 ntBASIC1.66□□□□□ -2.14
Cstf1Q99LC2 Gm15010-201ENSMUST00000117153 407 ntBASIC1.66□□□□□ -2.14
Cstf1Q99LC2 Gm27926-201ENSMUST00000157180 66 ntBASIC1.66□□□□□ -2.14
Cstf1Q99LC2 Gm22843-201ENSMUST00000157710 134 ntBASIC1.66□□□□□ -2.14
Cstf1Q99LC2 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.66□□□□□ -2.14
Cstf1Q99LC2 Gm24037-201ENSMUST00000082871 180 ntBASIC1.66□□□□□ -2.14
Cstf1Q99LC2 Gm26066-201ENSMUST00000083385 109 ntBASIC1.66□□□□□ -2.14
Cstf1Q99LC2 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.66□□□□□ -2.14
Cstf1Q99LC2 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.65□□□□□ -2.14
Cstf1Q99LC2 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.65□□□□□ -2.15
Cstf1Q99LC2 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Cstf1Q99LC2 Gm15443-201ENSMUST00000118947 820 ntBASIC1.65□□□□□ -2.15
Cstf1Q99LC2 Gm14269-201ENSMUST00000120455 306 ntBASIC1.65□□□□□ -2.15
Cstf1Q99LC2 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Cstf1Q99LC2 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.65□□□□□ -2.15
Cstf1Q99LC2 Gm22731-201ENSMUST00000158086 94 ntBASIC1.65□□□□□ -2.15
Cstf1Q99LC2 Gm22136-201ENSMUST00000158751 268 ntBASIC1.65□□□□□ -2.15
Cstf1Q99LC2 Mir1291-201ENSMUST00000199842 117 ntBASIC1.65□□□□□ -2.15
Cstf1Q99LC2 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.65□□□□□ -2.15
Cstf1Q99LC2 AC162857.1-201ENSMUST00000226614 400 ntBASIC1.65□□□□□ -2.15
Cstf1Q99LC2 Gm22299-201ENSMUST00000082663 136 ntBASIC1.65□□□□□ -2.15
Cstf1Q99LC2 Snora34-201ENSMUST00000083402 138 ntBASIC1.65□□□□□ -2.15
Cstf1Q99LC2 Mir320-201ENSMUST00000083594 82 ntBASIC1.65□□□□□ -2.15
Cstf1Q99LC2 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.64□□□□□ -2.15
Cstf1Q99LC2 Gm14296-202ENSMUST00000108931 750 ntBASIC1.64□□□□□ -2.15
Cstf1Q99LC2 Snord98-201ENSMUST00000116819 65 ntBASIC1.64□□□□□ -2.15
Cstf1Q99LC2 Gm6829-201ENSMUST00000119858 360 ntBASIC1.64□□□□□ -2.15
Cstf1Q99LC2 Gm24498-201ENSMUST00000158445 102 ntBASIC1.64□□□□□ -2.15
Cstf1Q99LC2 Gm24551-201ENSMUST00000158645 92 ntBASIC1.64□□□□□ -2.15
Cstf1Q99LC2 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.64□□□□□ -2.15
Cstf1Q99LC2 Gm3027-201ENSMUST00000167579 451 ntBASIC1.64□□□□□ -2.15
Cstf1Q99LC2 Gm22308-201ENSMUST00000177609 107 ntBASIC1.64□□□□□ -2.15
Cstf1Q99LC2 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.64□□□□□ -2.15
Cstf1Q99LC2 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC1.64□□□□□ -2.15
Cstf1Q99LC2 Mir3961-201ENSMUST00000198795 59 ntBASIC1.64□□□□□ -2.15
Cstf1Q99LC2 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.64□□□□□ -2.15
Cstf1Q99LC2 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.64□□□□□ -2.15
Cstf1Q99LC2 Gm20102-201ENSMUST00000222445 220 ntBASIC1.64□□□□□ -2.15
Cstf1Q99LC2 Gm22997-201ENSMUST00000082845 107 ntBASIC1.64□□□□□ -2.15
Cstf1Q99LC2 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Cstf1Q99LC2 Gm23336-201ENSMUST00000117023 123 ntBASIC1.63□□□□□ -2.15
Cstf1Q99LC2 Gm22338-201ENSMUST00000157715 129 ntBASIC1.63□□□□□ -2.15
Cstf1Q99LC2 Gm22386-201ENSMUST00000158192 129 ntBASIC1.63□□□□□ -2.15
Cstf1Q99LC2 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC1.63□□□□□ -2.15
Cstf1Q99LC2 Mir7059-201ENSMUST00000184825 59 ntBASIC1.63□□□□□ -2.15
Cstf1Q99LC2 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.63□□□□□ -2.15
Cstf1Q99LC2 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.63□□□□□ -2.15
Cstf1Q99LC2 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Cstf1Q99LC2 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.63□□□□□ -2.15
Cstf1Q99LC2 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.63□□□□□ -2.15
Cstf1Q99LC2 Gm25579-201ENSMUST00000083407 106 ntBASIC1.63□□□□□ -2.15
Cstf1Q99LC2 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
Cstf1Q99LC2 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Gm25773-201ENSMUST00000116718 127 ntBASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Gm14678-201ENSMUST00000121396 482 ntBASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Gm22603-201ENSMUST00000157603 96 ntBASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Gm23858-201ENSMUST00000158384 106 ntBASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Gm20438-201ENSMUST00000174441 329 ntBASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Gm25958-201ENSMUST00000175114 71 ntBASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Gm24572-201ENSMUST00000175505 88 ntBASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Mir7052-201ENSMUST00000184821 65 ntBASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Gm28383-201ENSMUST00000187563 139 ntBASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Gm29262-201ENSMUST00000190084 196 ntBASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Gm18291-201ENSMUST00000190791 301 ntBASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Gm43431-201ENSMUST00000198577 340 ntBASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Gm44384-201ENSMUST00000200208 114 ntBASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Gm44726-201ENSMUST00000203427 217 ntBASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.62□□□□□ -2.15
Cstf1Q99LC2 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Gm25801-201ENSMUST00000082638 106 ntBASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Gm26164-201ENSMUST00000083793 104 ntBASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Cstf1Q99LC2 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
Cstf1Q99LC2 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
Cstf1Q99LC2 Gm25496-201ENSMUST00000104430 120 ntBASIC1.61□□□□□ -2.15
Cstf1Q99LC2 Mir466f-2-201ENSMUST00000104805 94 ntBASIC1.61□□□□□ -2.15
Cstf1Q99LC2 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Cstf1Q99LC2 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 131.4 ms