Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm14716-201ENSMUST00000120138 718 ntBASIC0.07□□□□□ -2.4
Cspg4Q8VHY0 Gm13396-201ENSMUST00000120617 271 ntBASIC0.07□□□□□ -2.4
Cspg4Q8VHY0 Gm12591-201ENSMUST00000122407 1177 ntBASIC0.07□□□□□ -2.4
Cspg4Q8VHY0 Gm22706-201ENSMUST00000157907 112 ntBASIC0.07□□□□□ -2.4
Cspg4Q8VHY0 Gm22765-201ENSMUST00000158371 128 ntBASIC0.07□□□□□ -2.4
Cspg4Q8VHY0 Gm26405-201ENSMUST00000158495 100 ntBASIC0.07□□□□□ -2.4
Cspg4Q8VHY0 Gm25643-201ENSMUST00000158874 103 ntBASIC0.07□□□□□ -2.4
Cspg4Q8VHY0 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.07□□□□□ -2.4
Cspg4Q8VHY0 Gm37319-201ENSMUST00000193500 636 ntBASIC0.07□□□□□ -2.4
Cspg4Q8VHY0 Gm37089-201ENSMUST00000195616 129 ntBASIC0.07□□□□□ -2.4
Cspg4Q8VHY0 Gm42647-201ENSMUST00000195939 459 ntBASIC0.07□□□□□ -2.4
Cspg4Q8VHY0 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC0.07□□□□□ -2.4
Cspg4Q8VHY0 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.07□□□□□ -2.4
Cspg4Q8VHY0 Gm24527-201ENSMUST00000082920 107 ntBASIC0.07□□□□□ -2.4
Cspg4Q8VHY0 Gm24977-201ENSMUST00000083106 163 ntBASIC0.07□□□□□ -2.4
Cspg4Q8VHY0 Gm23851-201ENSMUST00000083831 103 ntBASIC0.07□□□□□ -2.4
Cspg4Q8VHY0 Gm14624-201ENSMUST00000117746 192 ntBASIC0.06□□□□□ -2.4
Cspg4Q8VHY0 Gm12806-201ENSMUST00000119384 268 ntBASIC0.06□□□□□ -2.4
Cspg4Q8VHY0 Gm14946-201ENSMUST00000119859 296 ntBASIC0.06□□□□□ -2.4
Cspg4Q8VHY0 Gm23206-201ENSMUST00000122720 184 ntBASIC0.06□□□□□ -2.4
Cspg4Q8VHY0 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.06□□□□□ -2.4
Cspg4Q8VHY0 Gm28921-201ENSMUST00000190219 378 ntBASIC0.06□□□□□ -2.4
Cspg4Q8VHY0 Gm37599-201ENSMUST00000193067 489 ntBASIC0.06□□□□□ -2.4
Cspg4Q8VHY0 Gm43035-201ENSMUST00000197626 517 ntBASIC0.06□□□□□ -2.4
Cspg4Q8VHY0 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
Cspg4Q8VHY0 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.06□□□□□ -2.4
Cspg4Q8VHY0 AL645546.2-201ENSMUST00000224526 265 ntBASIC0.06□□□□□ -2.4
Cspg4Q8VHY0 Gm15010-201ENSMUST00000117153 407 ntBASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Gm25663-201ENSMUST00000157698 135 ntBASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Mir3068-202ENSMUST00000197755 79 ntBASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Gm35262-201ENSMUST00000215133 267 ntBASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 DQ267101-201ENSMUST00000082562 73 ntBASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Gm25991-201ENSMUST00000102439 99 ntBASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Gm13378-201ENSMUST00000117483 336 ntBASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Gm23106-201ENSMUST00000157554 101 ntBASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Mir3108-201ENSMUST00000175500 79 ntBASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Gm25457-201ENSMUST00000179509 107 ntBASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Gm27475-201ENSMUST00000183420 61 ntBASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Gm27610-201ENSMUST00000184026 74 ntBASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Mir7065-201ENSMUST00000185110 61 ntBASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Gm36956-201ENSMUST00000193830 214 ntBASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Gm42976-201ENSMUST00000200313 222 ntBASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Gm43898-201ENSMUST00000204456 424 ntBASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 AC069561.3-201ENSMUST00000217321 114 ntBASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Gm26128-201ENSMUST00000083170 110 ntBASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Gm23462-201ENSMUST00000083264 104 ntBASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Gm25578-201ENSMUST00000083406 104 ntBASIC0.05□□□□□ -2.4
Cspg4Q8VHY0 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 Gm11813-201ENSMUST00000118586 291 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 Gm23317-201ENSMUST00000157999 129 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 Gm24851-201ENSMUST00000158028 103 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 Gm22087-201ENSMUST00000158339 88 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 Gm37578-201ENSMUST00000192256 1177 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 Gm20144-201ENSMUST00000203031 165 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 AC120540.1-201ENSMUST00000221879 324 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 AC154521.1-201ENSMUST00000222635 330 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 Gm24456-201ENSMUST00000083198 107 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 Gm24494-201ENSMUST00000083804 81 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 Gm24100-201ENSMUST00000178592 79 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 Gm26914-201ENSMUST00000182262 223 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 Gm28001-201ENSMUST00000183561 117 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 Mir6365-201ENSMUST00000183990 101 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 Gm28435-201ENSMUST00000185496 108 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 Gm19855-201ENSMUST00000210145 249 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 Gm25802-201ENSMUST00000082639 77 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 Gm25357-201ENSMUST00000082745 72 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 Gm22704-201ENSMUST00000083027 137 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 Snord33-201ENSMUST00000083694 84 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 AC124426.1-203ENSMUST00000221814 1362 ntBASIC0.04□□□□□ -2.4
Cspg4Q8VHY0 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC0.03□□□□□ -2.4
Cspg4Q8VHY0 Gm15878-201ENSMUST00000127561 306 ntBASIC0.03□□□□□ -2.4
Cspg4Q8VHY0 Gm22221-201ENSMUST00000157362 103 ntBASIC0.03□□□□□ -2.4
Cspg4Q8VHY0 Gm25162-201ENSMUST00000158906 159 ntBASIC0.03□□□□□ -2.4
Cspg4Q8VHY0 Gm27289-201ENSMUST00000183341 82 ntBASIC0.03□□□□□ -2.4
Cspg4Q8VHY0 Gm28995-201ENSMUST00000186625 261 ntBASIC0.03□□□□□ -2.4
Cspg4Q8VHY0 Gm37693-201ENSMUST00000194562 234 ntBASIC0.03□□□□□ -2.4
Cspg4Q8VHY0 Gm44137-201ENSMUST00000203670 367 ntBASIC0.03□□□□□ -2.4
Cspg4Q8VHY0 Gm45247-201ENSMUST00000210757 309 ntBASIC0.03□□□□□ -2.4
Cspg4Q8VHY0 AC134334.1-201ENSMUST00000214277 255 ntBASIC0.03□□□□□ -2.4
Cspg4Q8VHY0 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
Cspg4Q8VHY0 Gm25126-201ENSMUST00000083343 102 ntBASIC0.03□□□□□ -2.4
Cspg4Q8VHY0 Gm26166-201ENSMUST00000083788 107 ntBASIC0.03□□□□□ -2.4
Cspg4Q8VHY0 Gm22595-201ENSMUST00000104250 130 ntBASIC0.03□□□□□ -2.41
Cspg4Q8VHY0 Gm14362-201ENSMUST00000121679 273 ntBASIC0.03□□□□□ -2.41
Cspg4Q8VHY0 Gm15254-201ENSMUST00000149567 273 ntBASIC0.03□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms