Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm25506-201ENSMUST00000104339 70 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Gm11572-201ENSMUST00000119164 120 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Gm14713-201ENSMUST00000122362 686 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Gm16265-201ENSMUST00000134558 108 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Gm23777-201ENSMUST00000158994 259 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Mir1954-201ENSMUST00000175595 86 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Gm16404-201ENSMUST00000177739 468 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Gm23568-201ENSMUST00000177960 92 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Gm7958-201ENSMUST00000178255 468 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Gm24829-201ENSMUST00000179245 92 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Gm7950-201ENSMUST00000179633 468 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Gm14598-201ENSMUST00000180109 468 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Gm24306-201ENSMUST00000180229 79 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Gm14625-201ENSMUST00000180231 468 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Gm28956-201ENSMUST00000189047 427 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Gm29167-201ENSMUST00000190024 377 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Gm37713-201ENSMUST00000191746 198 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Gm44449-201ENSMUST00000203610 153 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Gm18242-201ENSMUST00000218455 542 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 AC124569.4-201ENSMUST00000223830 1220 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 AC167669.4-201ENSMUST00000225967 140 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 AC120553.1-201ENSMUST00000227313 260 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Mir362-201ENSMUST00000093592 65 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.46□□□□□ -2.34
Nup35Q8R4R6 Gm24430-201ENSMUST00000104077 104 ntBASIC0.45□□□□□ -2.34
Nup35Q8R4R6 Gm25876-201ENSMUST00000104329 119 ntBASIC0.45□□□□□ -2.34
Nup35Q8R4R6 Gm22543-201ENSMUST00000104347 94 ntBASIC0.45□□□□□ -2.34
Nup35Q8R4R6 Gm12432-201ENSMUST00000119540 186 ntBASIC0.45□□□□□ -2.34
Nup35Q8R4R6 Gm25384-201ENSMUST00000157807 105 ntBASIC0.45□□□□□ -2.34
Nup35Q8R4R6 Gm25166-201ENSMUST00000158909 111 ntBASIC0.45□□□□□ -2.34
Nup35Q8R4R6 Gm24084-201ENSMUST00000175173 137 ntBASIC0.45□□□□□ -2.34
Nup35Q8R4R6 Mir7663-201ENSMUST00000183950 61 ntBASIC0.45□□□□□ -2.34
Nup35Q8R4R6 Gm43602-201ENSMUST00000196772 300 ntBASIC0.45□□□□□ -2.34
Nup35Q8R4R6 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.45□□□□□ -2.34
Nup35Q8R4R6 Gm6369-201ENSMUST00000069626 412 ntBASIC0.45□□□□□ -2.34
Nup35Q8R4R6 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
Nup35Q8R4R6 Gm22302-201ENSMUST00000082657 106 ntBASIC0.45□□□□□ -2.34
Nup35Q8R4R6 Gm25651-201ENSMUST00000083782 119 ntBASIC0.45□□□□□ -2.34
Nup35Q8R4R6 Gm24340-201ENSMUST00000104208 97 ntBASIC0.44□□□□□ -2.34
Nup35Q8R4R6 Gm26249-201ENSMUST00000116708 118 ntBASIC0.44□□□□□ -2.34
Nup35Q8R4R6 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.44□□□□□ -2.34
Nup35Q8R4R6 Gm11792-201ENSMUST00000120640 168 ntBASIC0.44□□□□□ -2.34
Nup35Q8R4R6 Gm22236-201ENSMUST00000157093 106 ntBASIC0.44□□□□□ -2.34
Nup35Q8R4R6 Gm23819-201ENSMUST00000158744 109 ntBASIC0.44□□□□□ -2.34
Nup35Q8R4R6 Gm17164-201ENSMUST00000169013 506 ntBASIC0.44□□□□□ -2.34
Nup35Q8R4R6 Gm26236-201ENSMUST00000175536 137 ntBASIC0.44□□□□□ -2.34
Nup35Q8R4R6 Gm18396-201ENSMUST00000177095 361 ntBASIC0.44□□□□□ -2.34
Nup35Q8R4R6 Gm24862-201ENSMUST00000179103 79 ntBASIC0.44□□□□□ -2.34
Nup35Q8R4R6 Gm23310-201ENSMUST00000179105 79 ntBASIC0.44□□□□□ -2.34
Nup35Q8R4R6 Gm25461-201ENSMUST00000179293 79 ntBASIC0.44□□□□□ -2.34
Nup35Q8R4R6 Mir6364-201ENSMUST00000183396 86 ntBASIC0.44□□□□□ -2.34
Nup35Q8R4R6 Gm44358-201ENSMUST00000196301 98 ntBASIC0.44□□□□□ -2.34
Nup35Q8R4R6 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC0.44□□□□□ -2.34
Nup35Q8R4R6 Gm44487-201ENSMUST00000205145 325 ntBASIC0.44□□□□□ -2.34
Nup35Q8R4R6 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.44□□□□□ -2.34
Nup35Q8R4R6 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC0.44□□□□□ -2.34
Nup35Q8R4R6 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.44□□□□□ -2.34
Nup35Q8R4R6 AC167229.1-201ENSMUST00000220057 469 ntBASIC0.44□□□□□ -2.34
Nup35Q8R4R6 AC157654.1-201ENSMUST00000224130 820 ntBASIC0.44□□□□□ -2.34
Nup35Q8R4R6 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Nup35Q8R4R6 Gm25131-201ENSMUST00000082653 151 ntBASIC0.44□□□□□ -2.34
Nup35Q8R4R6 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
Nup35Q8R4R6 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.44□□□□□ -2.34
Nup35Q8R4R6 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Nup35Q8R4R6 Gm23203-201ENSMUST00000104374 107 ntBASIC0.43□□□□□ -2.34
Nup35Q8R4R6 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC0.43□□□□□ -2.34
Nup35Q8R4R6 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
Nup35Q8R4R6 Gm23714-201ENSMUST00000179259 105 ntBASIC0.43□□□□□ -2.34
Nup35Q8R4R6 Mir7052-201ENSMUST00000184821 65 ntBASIC0.43□□□□□ -2.34
Nup35Q8R4R6 Gm19901-201ENSMUST00000192191 495 ntBASIC0.43□□□□□ -2.34
Nup35Q8R4R6 Gm44396-201ENSMUST00000199843 114 ntBASIC0.43□□□□□ -2.34
Nup35Q8R4R6 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.43□□□□□ -2.34
Nup35Q8R4R6 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC0.43□□□□□ -2.34
Nup35Q8R4R6 AC154506.3-201ENSMUST00000225417 213 ntBASIC0.43□□□□□ -2.34
Nup35Q8R4R6 Gm5899-201ENSMUST00000071770 270 ntBASIC0.43□□□□□ -2.34
Nup35Q8R4R6 DQ267101-201ENSMUST00000082562 73 ntBASIC0.43□□□□□ -2.34
Nup35Q8R4R6 Gm24311-201ENSMUST00000082570 104 ntBASIC0.43□□□□□ -2.34
Nup35Q8R4R6 Gm26203-201ENSMUST00000082911 114 ntBASIC0.43□□□□□ -2.34
Nup35Q8R4R6 Snord33-201ENSMUST00000083694 84 ntBASIC0.43□□□□□ -2.34
Nup35Q8R4R6 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.43□□□□□ -2.34
Nup35Q8R4R6 Mir706-201ENSMUST00000102262 84 ntBASIC0.42□□□□□ -2.34
Nup35Q8R4R6 Gm12507-201ENSMUST00000119155 415 ntBASIC0.42□□□□□ -2.34
Nup35Q8R4R6 Gm6829-201ENSMUST00000119858 360 ntBASIC0.42□□□□□ -2.34
Nup35Q8R4R6 Gm15077-201ENSMUST00000122344 362 ntBASIC0.42□□□□□ -2.34
Nup35Q8R4R6 Gm24385-201ENSMUST00000122694 350 ntBASIC0.42□□□□□ -2.34
Nup35Q8R4R6 Gm26271-201ENSMUST00000158349 104 ntBASIC0.42□□□□□ -2.34
Nup35Q8R4R6 Gm2962-201ENSMUST00000159266 336 ntBASIC0.42□□□□□ -2.34
Nup35Q8R4R6 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
Nup35Q8R4R6 Mir3968-201ENSMUST00000175355 100 ntBASIC0.42□□□□□ -2.34
Nup35Q8R4R6 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.42□□□□□ -2.34
Nup35Q8R4R6 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
Nup35Q8R4R6 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.42□□□□□ -2.34
Nup35Q8R4R6 Gm24624-201ENSMUST00000082617 164 ntBASIC0.42□□□□□ -2.34
Nup35Q8R4R6 Mir33-201ENSMUST00000083531 69 ntBASIC0.42□□□□□ -2.34
Nup35Q8R4R6 AC102369.2-201ENSMUST00000219725 1679 ntBASIC0.42□□□□□ -2.34
Nup35Q8R4R6 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.42□□□□□ -2.34
Nup35Q8R4R6 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.41□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 120.5 ms