Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm23860-201ENSMUST00000179446 132 ntBASIC2.87□□□□□ -1.95
Clrn1Q8K445 Gm26297-201ENSMUST00000179464 132 ntBASIC2.87□□□□□ -1.95
Clrn1Q8K445 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Clrn1Q8K445 Gm27582-201ENSMUST00000184084 126 ntBASIC2.87□□□□□ -1.95
Clrn1Q8K445 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.87□□□□□ -1.95
Clrn1Q8K445 Gm44476-201ENSMUST00000196225 91 ntBASIC2.87□□□□□ -1.95
Clrn1Q8K445 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.87□□□□□ -1.95
Clrn1Q8K445 Gm18617-201ENSMUST00000222311 259 ntBASIC2.87□□□□□ -1.95
Clrn1Q8K445 Gm25589-201ENSMUST00000082502 166 ntBASIC2.87□□□□□ -1.95
Clrn1Q8K445 Gm24453-201ENSMUST00000083346 76 ntBASIC2.87□□□□□ -1.95
Clrn1Q8K445 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Clrn1Q8K445 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.86□□□□□ -1.95
Clrn1Q8K445 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.86□□□□□ -1.95
Clrn1Q8K445 Gm23391-201ENSMUST00000157579 104 ntBASIC2.86□□□□□ -1.95
Clrn1Q8K445 Gm28992-201ENSMUST00000190534 139 ntBASIC2.86□□□□□ -1.95
Clrn1Q8K445 Gm37918-201ENSMUST00000192071 120 ntBASIC2.86□□□□□ -1.95
Clrn1Q8K445 Igkv11-118-201ENSMUST00000199448 346 ntBASIC2.86□□□□□ -1.95
Clrn1Q8K445 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.86□□□□□ -1.95
Clrn1Q8K445 Gm46993-201ENSMUST00000220708 259 ntBASIC2.86□□□□□ -1.95
Clrn1Q8K445 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.86□□□□□ -1.95
Clrn1Q8K445 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.86□□□□□ -1.95
Clrn1Q8K445 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Clrn1Q8K445 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
Clrn1Q8K445 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Clrn1Q8K445 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Clrn1Q8K445 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Clrn1Q8K445 Gm24376-201ENSMUST00000104399 127 ntBASIC2.85□□□□□ -1.95
Clrn1Q8K445 Gm12143-201ENSMUST00000119666 332 ntBASIC2.85□□□□□ -1.95
Clrn1Q8K445 Gm14389-201ENSMUST00000140453 241 ntBASIC2.85□□□□□ -1.95
Clrn1Q8K445 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.85□□□□□ -1.95
Clrn1Q8K445 Gm22853-201ENSMUST00000174974 131 ntBASIC2.85□□□□□ -1.95
Clrn1Q8K445 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Clrn1Q8K445 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.85□□□□□ -1.95
Clrn1Q8K445 Gm43749-201ENSMUST00000199345 352 ntBASIC2.85□□□□□ -1.95
Clrn1Q8K445 Gm18991-201ENSMUST00000209225 746 ntBASIC2.85□□□□□ -1.95
Clrn1Q8K445 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.85□□□□□ -1.95
Clrn1Q8K445 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Clrn1Q8K445 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Clrn1Q8K445 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.85□□□□□ -1.95
Clrn1Q8K445 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Clrn1Q8K445 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC2.84□□□□□ -1.95
Clrn1Q8K445 Gm22187-201ENSMUST00000157819 129 ntBASIC2.84□□□□□ -1.95
Clrn1Q8K445 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Clrn1Q8K445 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Clrn1Q8K445 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Clrn1Q8K445 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Clrn1Q8K445 Gm17522-201ENSMUST00000178144 498 ntBASIC2.84□□□□□ -1.95
Clrn1Q8K445 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Clrn1Q8K445 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Clrn1Q8K445 Gm25253-201ENSMUST00000179958 107 ntBASIC2.84□□□□□ -1.95
Clrn1Q8K445 Ighv1-28-201ENSMUST00000192987 351 ntBASIC2.84□□□□□ -1.95
Clrn1Q8K445 Mir721-201ENSMUST00000200230 88 ntBASIC2.84□□□□□ -1.95
Clrn1Q8K445 AC134596.2-201ENSMUST00000222158 171 ntBASIC2.84□□□□□ -1.95
Clrn1Q8K445 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.84□□□□□ -1.95
Clrn1Q8K445 Gm22248-201ENSMUST00000082482 150 ntBASIC2.84□□□□□ -1.95
Clrn1Q8K445 Gm25081-201ENSMUST00000082534 108 ntBASIC2.84□□□□□ -1.95
Clrn1Q8K445 Gm25634-201ENSMUST00000082667 105 ntBASIC2.84□□□□□ -1.95
Clrn1Q8K445 Gm22421-201ENSMUST00000083058 107 ntBASIC2.84□□□□□ -1.95
Clrn1Q8K445 Gm26265-201ENSMUST00000083277 135 ntBASIC2.84□□□□□ -1.95
Clrn1Q8K445 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Clrn1Q8K445 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Clrn1Q8K445 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.83□□□□□ -1.96
Clrn1Q8K445 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Clrn1Q8K445 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Clrn1Q8K445 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Clrn1Q8K445 Gm24126-201ENSMUST00000104111 106 ntBASIC2.83□□□□□ -1.96
Clrn1Q8K445 Gm25168-201ENSMUST00000104189 132 ntBASIC2.83□□□□□ -1.96
Clrn1Q8K445 Gm25915-201ENSMUST00000104265 126 ntBASIC2.83□□□□□ -1.96
Clrn1Q8K445 Mir291a-201ENSMUST00000104815 82 ntBASIC2.83□□□□□ -1.96
Clrn1Q8K445 Gm22281-201ENSMUST00000157198 103 ntBASIC2.83□□□□□ -1.96
Clrn1Q8K445 Gm26482-201ENSMUST00000158015 62 ntBASIC2.83□□□□□ -1.96
Clrn1Q8K445 Gm33866-201ENSMUST00000196911 289 ntBASIC2.83□□□□□ -1.96
Clrn1Q8K445 Snord80-202ENSMUST00000199023 77 ntBASIC2.83□□□□□ -1.96
Clrn1Q8K445 Gm18213-201ENSMUST00000207850 178 ntBASIC2.83□□□□□ -1.96
Clrn1Q8K445 Gm45288-201ENSMUST00000210236 151 ntBASIC2.83□□□□□ -1.96
Clrn1Q8K445 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.83□□□□□ -1.96
Clrn1Q8K445 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC2.83□□□□□ -1.96
Clrn1Q8K445 Gm24625-201ENSMUST00000082622 130 ntBASIC2.83□□□□□ -1.96
Clrn1Q8K445 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Clrn1Q8K445 Gm22961-201ENSMUST00000157964 106 ntBASIC2.82□□□□□ -1.96
Clrn1Q8K445 Gm24131-201ENSMUST00000158539 107 ntBASIC2.82□□□□□ -1.96
Clrn1Q8K445 Gm28344-201ENSMUST00000185704 279 ntBASIC2.82□□□□□ -1.96
Clrn1Q8K445 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.82□□□□□ -1.96
Clrn1Q8K445 Gm44964-201ENSMUST00000207011 273 ntBASIC2.82□□□□□ -1.96
Clrn1Q8K445 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.82□□□□□ -1.96
Clrn1Q8K445 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.82□□□□□ -1.96
Clrn1Q8K445 Gm11351-202ENSMUST00000225724 478 ntBASIC2.82□□□□□ -1.96
Clrn1Q8K445 AF357341-201ENSMUST00000083088 75 ntBASIC2.82□□□□□ -1.96
Clrn1Q8K445 Gm23297-201ENSMUST00000083184 127 ntBASIC2.82□□□□□ -1.96
Clrn1Q8K445 Mir184-201ENSMUST00000083662 69 ntBASIC2.82□□□□□ -1.96
Clrn1Q8K445 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.82□□□□□ -1.96
Clrn1Q8K445 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Clrn1Q8K445 Gm22193-201ENSMUST00000116868 76 ntBASIC2.81□□□□□ -1.96
Clrn1Q8K445 Gm15282-201ENSMUST00000117707 300 ntBASIC2.81□□□□□ -1.96
Clrn1Q8K445 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC2.81□□□□□ -1.96
Clrn1Q8K445 Gm25985-201ENSMUST00000122677 107 ntBASIC2.81□□□□□ -1.96
Clrn1Q8K445 Gm24480-201ENSMUST00000157442 103 ntBASIC2.81□□□□□ -1.96
Clrn1Q8K445 Gm23588-201ENSMUST00000157659 99 ntBASIC2.81□□□□□ -1.96
Clrn1Q8K445 Gm17020-201ENSMUST00000172274 274 ntBASIC2.81□□□□□ -1.96
Clrn1Q8K445 Gm4479-201ENSMUST00000178807 171 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms