Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 CT010454.1-201ENSMUST00000225975 265 ntBASIC2.66□□□□□ -1.98
CopaQ8CIE6 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.66□□□□□ -1.98
CopaQ8CIE6 Gm22294-201ENSMUST00000083308 104 ntBASIC2.66□□□□□ -1.98
CopaQ8CIE6 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
CopaQ8CIE6 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.66□□□□□ -1.98
CopaQ8CIE6 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
CopaQ8CIE6 AC160115.1-201ENSMUST00000224678 1574 ntBASIC2.66□□□□□ -1.98
CopaQ8CIE6 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CopaQ8CIE6 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CopaQ8CIE6 Defb44-ps-201ENSMUST00000126871 219 ntBASIC2.65□□□□□ -1.99
CopaQ8CIE6 Gm16355-201ENSMUST00000128606 231 ntBASIC2.65□□□□□ -1.99
CopaQ8CIE6 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CopaQ8CIE6 Gm24436-201ENSMUST00000157889 302 ntBASIC2.65□□□□□ -1.99
CopaQ8CIE6 Gm24681-201ENSMUST00000158760 107 ntBASIC2.65□□□□□ -1.99
CopaQ8CIE6 Gm24082-201ENSMUST00000175175 83 ntBASIC2.65□□□□□ -1.99
CopaQ8CIE6 Mir3103-201ENSMUST00000175474 67 ntBASIC2.65□□□□□ -1.99
CopaQ8CIE6 Mir7013-201ENSMUST00000183540 72 ntBASIC2.65□□□□□ -1.99
CopaQ8CIE6 Gm18991-201ENSMUST00000209225 746 ntBASIC2.65□□□□□ -1.99
CopaQ8CIE6 AL929417.1-201ENSMUST00000214901 124 ntBASIC2.65□□□□□ -1.99
CopaQ8CIE6 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.65□□□□□ -1.99
CopaQ8CIE6 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.65□□□□□ -1.99
CopaQ8CIE6 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CopaQ8CIE6 Mir875-201ENSMUST00000104698 78 ntBASIC2.64□□□□□ -1.99
CopaQ8CIE6 Gm25321-201ENSMUST00000122558 102 ntBASIC2.64□□□□□ -1.99
CopaQ8CIE6 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC2.64□□□□□ -1.99
CopaQ8CIE6 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.64□□□□□ -1.99
CopaQ8CIE6 Gm22500-201ENSMUST00000158982 99 ntBASIC2.64□□□□□ -1.99
CopaQ8CIE6 Gm23977-201ENSMUST00000177871 74 ntBASIC2.64□□□□□ -1.99
CopaQ8CIE6 Gm27220-201ENSMUST00000183453 262 ntBASIC2.64□□□□□ -1.99
CopaQ8CIE6 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC2.64□□□□□ -1.99
CopaQ8CIE6 Igkv15-102-201ENSMUST00000197885 287 ntBASIC2.64□□□□□ -1.99
CopaQ8CIE6 Gm44256-201ENSMUST00000203304 335 ntBASIC2.64□□□□□ -1.99
CopaQ8CIE6 Gm18346-201ENSMUST00000216782 325 ntBASIC2.64□□□□□ -1.99
CopaQ8CIE6 AC163033.1-201ENSMUST00000218608 157 ntBASIC2.64□□□□□ -1.99
CopaQ8CIE6 AL606472.1-201ENSMUST00000224628 275 ntBASIC2.64□□□□□ -1.99
CopaQ8CIE6 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CopaQ8CIE6 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CopaQ8CIE6 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CopaQ8CIE6 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.63□□□□□ -1.99
CopaQ8CIE6 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2.63□□□□□ -1.99
CopaQ8CIE6 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CopaQ8CIE6 Gm24116-201ENSMUST00000103975 107 ntBASIC2.63□□□□□ -1.99
CopaQ8CIE6 Gm22195-201ENSMUST00000116861 108 ntBASIC2.63□□□□□ -1.99
CopaQ8CIE6 Gm22678-201ENSMUST00000116974 101 ntBASIC2.63□□□□□ -1.99
CopaQ8CIE6 Gm6829-201ENSMUST00000119858 360 ntBASIC2.63□□□□□ -1.99
CopaQ8CIE6 Gm28849-201ENSMUST00000188127 174 ntBASIC2.63□□□□□ -1.99
CopaQ8CIE6 Gm28330-201ENSMUST00000190353 171 ntBASIC2.63□□□□□ -1.99
CopaQ8CIE6 Gm29818-201ENSMUST00000218070 165 ntBASIC2.63□□□□□ -1.99
CopaQ8CIE6 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.63□□□□□ -1.99
CopaQ8CIE6 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.63□□□□□ -1.99
CopaQ8CIE6 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.62□□□□□ -1.99
CopaQ8CIE6 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
CopaQ8CIE6 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CopaQ8CIE6 Snora36b-201ENSMUST00000104383 132 ntBASIC2.62□□□□□ -1.99
CopaQ8CIE6 Gm26249-201ENSMUST00000116708 118 ntBASIC2.62□□□□□ -1.99
CopaQ8CIE6 Gm13880-201ENSMUST00000118421 474 ntBASIC2.62□□□□□ -1.99
CopaQ8CIE6 Gm25059-201ENSMUST00000157367 117 ntBASIC2.62□□□□□ -1.99
CopaQ8CIE6 Gm23381-201ENSMUST00000157676 94 ntBASIC2.62□□□□□ -1.99
CopaQ8CIE6 Gm24818-201ENSMUST00000175093 161 ntBASIC2.62□□□□□ -1.99
CopaQ8CIE6 Gm17067-202ENSMUST00000180131 123 ntBASIC2.62□□□□□ -1.99
CopaQ8CIE6 Mir6353-201ENSMUST00000183596 113 ntBASIC2.62□□□□□ -1.99
CopaQ8CIE6 Gm27786-201ENSMUST00000184337 70 ntBASIC2.62□□□□□ -1.99
CopaQ8CIE6 Trbv18-201ENSMUST00000194256 294 ntBASIC2.62□□□□□ -1.99
CopaQ8CIE6 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.62□□□□□ -1.99
CopaQ8CIE6 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.62□□□□□ -1.99
CopaQ8CIE6 Gm25589-201ENSMUST00000082502 166 ntBASIC2.62□□□□□ -1.99
CopaQ8CIE6 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CopaQ8CIE6 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
CopaQ8CIE6 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CopaQ8CIE6 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CopaQ8CIE6 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.61□□□□□ -1.99
CopaQ8CIE6 Gm25875-201ENSMUST00000104323 107 ntBASIC2.61□□□□□ -1.99
CopaQ8CIE6 n-R5s67-201ENSMUST00000104336 114 ntBASIC2.61□□□□□ -1.99
CopaQ8CIE6 Gm13714-201ENSMUST00000117313 221 ntBASIC2.61□□□□□ -1.99
CopaQ8CIE6 Gm13885-201ENSMUST00000117569 187 ntBASIC2.61□□□□□ -1.99
CopaQ8CIE6 Gm12351-201ENSMUST00000118727 292 ntBASIC2.61□□□□□ -1.99
CopaQ8CIE6 Gm13862-201ENSMUST00000121220 197 ntBASIC2.61□□□□□ -1.99
CopaQ8CIE6 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC2.61□□□□□ -1.99
CopaQ8CIE6 Gm24475-201ENSMUST00000157435 143 ntBASIC2.61□□□□□ -1.99
CopaQ8CIE6 Gm22675-201ENSMUST00000158430 104 ntBASIC2.61□□□□□ -1.99
CopaQ8CIE6 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC2.61□□□□□ -1.99
CopaQ8CIE6 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CopaQ8CIE6 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.61□□□□□ -1.99
CopaQ8CIE6 Gm37807-201ENSMUST00000194310 190 ntBASIC2.61□□□□□ -1.99
CopaQ8CIE6 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC2.61□□□□□ -1.99
CopaQ8CIE6 Gm25930-201ENSMUST00000082785 107 ntBASIC2.61□□□□□ -1.99
CopaQ8CIE6 Gm22571-201ENSMUST00000082984 70 ntBASIC2.61□□□□□ -1.99
CopaQ8CIE6 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CopaQ8CIE6 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CopaQ8CIE6 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.6□□□□□ -1.99
CopaQ8CIE6 Mir682-201ENSMUST00000102281 96 ntBASIC2.6□□□□□ -1.99
CopaQ8CIE6 Gm22486-201ENSMUST00000116815 137 ntBASIC2.6□□□□□ -1.99
CopaQ8CIE6 Gm11936-201ENSMUST00000118323 160 ntBASIC2.6□□□□□ -1.99
CopaQ8CIE6 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.6□□□□□ -1.99
CopaQ8CIE6 Gm24909-201ENSMUST00000157290 280 ntBASIC2.6□□□□□ -1.99
CopaQ8CIE6 Gm24480-201ENSMUST00000157442 103 ntBASIC2.6□□□□□ -1.99
CopaQ8CIE6 Gm25888-201ENSMUST00000157778 302 ntBASIC2.6□□□□□ -1.99
CopaQ8CIE6 Gm22483-201ENSMUST00000157986 274 ntBASIC2.6□□□□□ -1.99
CopaQ8CIE6 Gm23033-201ENSMUST00000157996 134 ntBASIC2.6□□□□□ -1.99
CopaQ8CIE6 Gm22315-201ENSMUST00000158010 143 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 162.1 ms