Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm24861-201ENSMUST00000083459 107 ntBASIC0.9□□□□□ -2.27
Ccdc28aQ8CEI3 Gm24803-201ENSMUST00000083693 107 ntBASIC0.9□□□□□ -2.27
Ccdc28aQ8CEI3 Gm23103-201ENSMUST00000083725 107 ntBASIC0.9□□□□□ -2.27
Ccdc28aQ8CEI3 Gm22580-201ENSMUST00000083727 107 ntBASIC0.9□□□□□ -2.27
Ccdc28aQ8CEI3 Gm24260-201ENSMUST00000083741 107 ntBASIC0.9□□□□□ -2.27
Ccdc28aQ8CEI3 Gm23732-201ENSMUST00000083751 107 ntBASIC0.9□□□□□ -2.27
Ccdc28aQ8CEI3 Gm22682-201ENSMUST00000083854 107 ntBASIC0.9□□□□□ -2.27
Ccdc28aQ8CEI3 Gm25869-201ENSMUST00000083855 107 ntBASIC0.9□□□□□ -2.27
Ccdc28aQ8CEI3 Gm24693-201ENSMUST00000083885 107 ntBASIC0.9□□□□□ -2.27
Ccdc28aQ8CEI3 Gm26317-201ENSMUST00000083894 107 ntBASIC0.9□□□□□ -2.27
Ccdc28aQ8CEI3 Gm22352-201ENSMUST00000083917 107 ntBASIC0.9□□□□□ -2.27
Ccdc28aQ8CEI3 Gm24448-201ENSMUST00000083979 107 ntBASIC0.9□□□□□ -2.27
Ccdc28aQ8CEI3 Gm22798-201ENSMUST00000083992 107 ntBASIC0.9□□□□□ -2.27
Ccdc28aQ8CEI3 Gm26427-201ENSMUST00000093648 107 ntBASIC0.9□□□□□ -2.27
Ccdc28aQ8CEI3 Gm22886-201ENSMUST00000093714 107 ntBASIC0.9□□□□□ -2.27
Ccdc28aQ8CEI3 Gm22170-201ENSMUST00000097247 107 ntBASIC0.9□□□□□ -2.27
Ccdc28aQ8CEI3 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC0.9□□□□□ -2.27
Ccdc28aQ8CEI3 Gm12512-201ENSMUST00000119620 217 ntBASIC0.89□□□□□ -2.27
Ccdc28aQ8CEI3 Gm3788-201ENSMUST00000119949 136 ntBASIC0.89□□□□□ -2.27
Ccdc28aQ8CEI3 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC0.89□□□□□ -2.27
Ccdc28aQ8CEI3 Gm25956-201ENSMUST00000175115 217 ntBASIC0.89□□□□□ -2.27
Ccdc28aQ8CEI3 Gm21815-201ENSMUST00000178213 664 ntBASIC0.89□□□□□ -2.27
Ccdc28aQ8CEI3 Gm20874-201ENSMUST00000178356 663 ntBASIC0.89□□□□□ -2.27
Ccdc28aQ8CEI3 Gm22631-201ENSMUST00000179656 94 ntBASIC0.89□□□□□ -2.27
Ccdc28aQ8CEI3 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC0.89□□□□□ -2.27
Ccdc28aQ8CEI3 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Ccdc28aQ8CEI3 Gm38261-201ENSMUST00000192608 316 ntBASIC0.89□□□□□ -2.27
Ccdc28aQ8CEI3 AC134334.1-201ENSMUST00000214277 255 ntBASIC0.89□□□□□ -2.27
Ccdc28aQ8CEI3 Gm40810-201ENSMUST00000219149 253 ntBASIC0.89□□□□□ -2.27
Ccdc28aQ8CEI3 Gm35558-203ENSMUST00000222264 204 ntBASIC0.89□□□□□ -2.27
Ccdc28aQ8CEI3 Gm26457-201ENSMUST00000082678 78 ntBASIC0.89□□□□□ -2.27
Ccdc28aQ8CEI3 Gm25038-201ENSMUST00000082928 130 ntBASIC0.89□□□□□ -2.27
Ccdc28aQ8CEI3 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Ccdc28aQ8CEI3 Gm24172-201ENSMUST00000104127 117 ntBASIC0.88□□□□□ -2.27
Ccdc28aQ8CEI3 Gm11891-201ENSMUST00000121241 619 ntBASIC0.88□□□□□ -2.27
Ccdc28aQ8CEI3 Gm25384-201ENSMUST00000157807 105 ntBASIC0.88□□□□□ -2.27
Ccdc28aQ8CEI3 Gm22328-201ENSMUST00000158074 112 ntBASIC0.88□□□□□ -2.27
Ccdc28aQ8CEI3 Gm23289-201ENSMUST00000175615 108 ntBASIC0.88□□□□□ -2.27
Ccdc28aQ8CEI3 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
Ccdc28aQ8CEI3 Gm23523-201ENSMUST00000180190 107 ntBASIC0.88□□□□□ -2.27
Ccdc28aQ8CEI3 Gm27660-201ENSMUST00000184028 208 ntBASIC0.88□□□□□ -2.27
Ccdc28aQ8CEI3 Gm27587-201ENSMUST00000185116 163 ntBASIC0.88□□□□□ -2.27
Ccdc28aQ8CEI3 Gm28409-201ENSMUST00000187064 103 ntBASIC0.88□□□□□ -2.27
Ccdc28aQ8CEI3 Gm29352-201ENSMUST00000188054 544 ntBASIC0.88□□□□□ -2.27
Ccdc28aQ8CEI3 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC0.88□□□□□ -2.27
Ccdc28aQ8CEI3 Gm38274-201ENSMUST00000195689 148 ntBASIC0.88□□□□□ -2.27
Ccdc28aQ8CEI3 Gm44446-201ENSMUST00000204864 255 ntBASIC0.88□□□□□ -2.27
Ccdc28aQ8CEI3 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC0.88□□□□□ -2.27
Ccdc28aQ8CEI3 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC0.88□□□□□ -2.27
Ccdc28aQ8CEI3 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
Ccdc28aQ8CEI3 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC0.88□□□□□ -2.27
Ccdc28aQ8CEI3 AC161250.2-201ENSMUST00000215114 3107 ntBASIC0.88□□□□□ -2.27
Ccdc28aQ8CEI3 Gm13457-201ENSMUST00000117885 267 ntBASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 Gm26278-201ENSMUST00000157098 132 ntBASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 Gm22654-201ENSMUST00000157874 105 ntBASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 Gm27510-201ENSMUST00000158214 64 ntBASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 Gm25768-201ENSMUST00000158570 98 ntBASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 Mir7050-201ENSMUST00000184636 60 ntBASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 Gm27385-201ENSMUST00000184747 104 ntBASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 Gm28344-201ENSMUST00000185704 279 ntBASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 Gm9156-201ENSMUST00000189660 463 ntBASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 AC192616.1-201ENSMUST00000221922 132 ntBASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 Gm24977-201ENSMUST00000083106 163 ntBASIC0.87□□□□□ -2.27
Ccdc28aQ8CEI3 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
Ccdc28aQ8CEI3 Gm22193-201ENSMUST00000116868 76 ntBASIC0.86□□□□□ -2.27
Ccdc28aQ8CEI3 Gm14355-201ENSMUST00000117352 264 ntBASIC0.86□□□□□ -2.27
Ccdc28aQ8CEI3 Gm12449-201ENSMUST00000117572 234 ntBASIC0.86□□□□□ -2.27
Ccdc28aQ8CEI3 Fau-ps1-201ENSMUST00000119675 252 ntBASIC0.86□□□□□ -2.27
Ccdc28aQ8CEI3 Gm14364-201ENSMUST00000129209 267 ntBASIC0.86□□□□□ -2.27
Ccdc28aQ8CEI3 Gm23230-201ENSMUST00000157298 133 ntBASIC0.86□□□□□ -2.27
Ccdc28aQ8CEI3 Gm25371-201ENSMUST00000158162 101 ntBASIC0.86□□□□□ -2.27
Ccdc28aQ8CEI3 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
Ccdc28aQ8CEI3 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC0.86□□□□□ -2.27
Ccdc28aQ8CEI3 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
Ccdc28aQ8CEI3 Gm18296-201ENSMUST00000192475 783 ntBASIC0.86□□□□□ -2.27
Ccdc28aQ8CEI3 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.86□□□□□ -2.27
Ccdc28aQ8CEI3 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.86□□□□□ -2.27
Ccdc28aQ8CEI3 Gm22972-201ENSMUST00000083297 131 ntBASIC0.86□□□□□ -2.27
Ccdc28aQ8CEI3 Snora34-201ENSMUST00000083402 138 ntBASIC0.86□□□□□ -2.27
Ccdc28aQ8CEI3 Gm24494-201ENSMUST00000083804 81 ntBASIC0.86□□□□□ -2.27
Ccdc28aQ8CEI3 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
Ccdc28aQ8CEI3 Gm26074-201ENSMUST00000104063 129 ntBASIC0.85□□□□□ -2.27
Ccdc28aQ8CEI3 Gm23015-201ENSMUST00000104145 128 ntBASIC0.85□□□□□ -2.27
Ccdc28aQ8CEI3 Gm11407-201ENSMUST00000120362 1058 ntBASIC0.85□□□□□ -2.27
Ccdc28aQ8CEI3 Gm13992-201ENSMUST00000120558 156 ntBASIC0.85□□□□□ -2.27
Ccdc28aQ8CEI3 Gm23212-201ENSMUST00000122718 60 ntBASIC0.85□□□□□ -2.27
Ccdc28aQ8CEI3 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC0.85□□□□□ -2.27
Ccdc28aQ8CEI3 Gm26149-201ENSMUST00000157432 108 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms