Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Mir466b-8-201ENSMUST00000103883 86 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Gm23202-201ENSMUST00000104376 129 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Gm6954-201ENSMUST00000117416 225 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Gm25543-201ENSMUST00000122678 312 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Gm22792-201ENSMUST00000157225 133 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Gm27723-201ENSMUST00000157398 63 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Gm27396-201ENSMUST00000157708 58 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Gm22316-201ENSMUST00000158012 216 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Gm22382-201ENSMUST00000158185 130 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Gm20660-201ENSMUST00000177515 289 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Gm22367-201ENSMUST00000178930 132 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Gm25450-201ENSMUST00000179144 107 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Mir6995-201ENSMUST00000183658 71 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Gm29452-201ENSMUST00000187996 313 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Mir7116-201ENSMUST00000195956 70 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Mir466e-201ENSMUST00000198862 84 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Mir466c-1-201ENSMUST00000200654 84 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Gm42739-201ENSMUST00000200687 226 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Gm43978-201ENSMUST00000203491 451 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 AC145736.2-201ENSMUST00000216305 365 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Gm22249-201ENSMUST00000082485 136 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Mir93-201ENSMUST00000083593 88 ntBASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.09□□□□□ -2.07
Ccdc28bQ8CEG5 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
Ccdc28bQ8CEG5 Gm15526-201ENSMUST00000112504 204 ntBASIC2.08□□□□□ -2.08
Ccdc28bQ8CEG5 Gm11936-201ENSMUST00000118323 160 ntBASIC2.08□□□□□ -2.08
Ccdc28bQ8CEG5 Gm14881-201ENSMUST00000120366 372 ntBASIC2.08□□□□□ -2.08
Ccdc28bQ8CEG5 Gm24629-201ENSMUST00000122762 89 ntBASIC2.08□□□□□ -2.08
Ccdc28bQ8CEG5 Gm24911-201ENSMUST00000157292 136 ntBASIC2.08□□□□□ -2.08
Ccdc28bQ8CEG5 Gm25454-201ENSMUST00000157947 315 ntBASIC2.08□□□□□ -2.08
Ccdc28bQ8CEG5 Gm25224-201ENSMUST00000158195 68 ntBASIC2.08□□□□□ -2.08
Ccdc28bQ8CEG5 Gm24922-201ENSMUST00000158511 102 ntBASIC2.08□□□□□ -2.08
Ccdc28bQ8CEG5 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.08□□□□□ -2.08
Ccdc28bQ8CEG5 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.08□□□□□ -2.08
Ccdc28bQ8CEG5 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.08□□□□□ -2.08
Ccdc28bQ8CEG5 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Ccdc28bQ8CEG5 Gm25078-201ENSMUST00000082530 107 ntBASIC2.08□□□□□ -2.08
Ccdc28bQ8CEG5 Gm26497-201ENSMUST00000083146 107 ntBASIC2.08□□□□□ -2.08
Ccdc28bQ8CEG5 Gm23462-201ENSMUST00000083264 104 ntBASIC2.08□□□□□ -2.08
Ccdc28bQ8CEG5 Gm23451-201ENSMUST00000083328 122 ntBASIC2.08□□□□□ -2.08
Ccdc28bQ8CEG5 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.08□□□□□ -2.08
Ccdc28bQ8CEG5 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.08□□□□□ -2.08
Ccdc28bQ8CEG5 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Ccdc28bQ8CEG5 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.08□□□□□ -2.08
Ccdc28bQ8CEG5 Gm15102-201ENSMUST00000118740 1502 ntBASIC2.07□□□□□ -2.08
Ccdc28bQ8CEG5 AC160115.1-201ENSMUST00000224678 1574 ntBASIC2.07□□□□□ -2.08
Ccdc28bQ8CEG5 Gm24127-201ENSMUST00000104110 130 ntBASIC2.07□□□□□ -2.08
Ccdc28bQ8CEG5 Mir872-201ENSMUST00000104728 81 ntBASIC2.07□□□□□ -2.08
Ccdc28bQ8CEG5 Gm15497-201ENSMUST00000119137 551 ntBASIC2.07□□□□□ -2.08
Ccdc28bQ8CEG5 Gm11794-201ENSMUST00000119446 237 ntBASIC2.07□□□□□ -2.08
Ccdc28bQ8CEG5 Gm14792-201ENSMUST00000119725 258 ntBASIC2.07□□□□□ -2.08
Ccdc28bQ8CEG5 Gm24909-201ENSMUST00000157290 280 ntBASIC2.07□□□□□ -2.08
Ccdc28bQ8CEG5 Gm23589-201ENSMUST00000157660 105 ntBASIC2.07□□□□□ -2.08
Ccdc28bQ8CEG5 Gm23474-201ENSMUST00000158884 75 ntBASIC2.07□□□□□ -2.08
Ccdc28bQ8CEG5 Gm27753-201ENSMUST00000184742 203 ntBASIC2.07□□□□□ -2.08
Ccdc28bQ8CEG5 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.07□□□□□ -2.08
Ccdc28bQ8CEG5 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.07□□□□□ -2.08
Ccdc28bQ8CEG5 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Ccdc28bQ8CEG5 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.07□□□□□ -2.08
Ccdc28bQ8CEG5 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.06□□□□□ -2.08
Ccdc28bQ8CEG5 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
Ccdc28bQ8CEG5 Mir875-201ENSMUST00000104698 78 ntBASIC2.06□□□□□ -2.08
Ccdc28bQ8CEG5 Gm15846-201ENSMUST00000116022 320 ntBASIC2.06□□□□□ -2.08
Ccdc28bQ8CEG5 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.06□□□□□ -2.08
Ccdc28bQ8CEG5 Gm13581-201ENSMUST00000120675 278 ntBASIC2.06□□□□□ -2.08
Ccdc28bQ8CEG5 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.06□□□□□ -2.08
Ccdc28bQ8CEG5 Gm25373-201ENSMUST00000158156 115 ntBASIC2.06□□□□□ -2.08
Ccdc28bQ8CEG5 Gm27747-201ENSMUST00000184707 85 ntBASIC2.06□□□□□ -2.08
Ccdc28bQ8CEG5 Gm27760-201ENSMUST00000185048 114 ntBASIC2.06□□□□□ -2.08
Ccdc28bQ8CEG5 Gm28849-201ENSMUST00000188127 174 ntBASIC2.06□□□□□ -2.08
Ccdc28bQ8CEG5 Gm28330-201ENSMUST00000190353 171 ntBASIC2.06□□□□□ -2.08
Ccdc28bQ8CEG5 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.06□□□□□ -2.08
Ccdc28bQ8CEG5 Igkv15-102-201ENSMUST00000197885 287 ntBASIC2.06□□□□□ -2.08
Ccdc28bQ8CEG5 Gm44429-201ENSMUST00000203542 186 ntBASIC2.06□□□□□ -2.08
Ccdc28bQ8CEG5 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.06□□□□□ -2.08
Ccdc28bQ8CEG5 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC2.06□□□□□ -2.08
Ccdc28bQ8CEG5 Gm24356-201ENSMUST00000082859 106 ntBASIC2.06□□□□□ -2.08
Ccdc28bQ8CEG5 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.06□□□□□ -2.08
Ccdc28bQ8CEG5 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.06□□□□□ -2.08
Ccdc28bQ8CEG5 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Ccdc28bQ8CEG5 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.05□□□□□ -2.08
Ccdc28bQ8CEG5 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Ccdc28bQ8CEG5 Gm25184-201ENSMUST00000157753 163 ntBASIC2.05□□□□□ -2.08
Ccdc28bQ8CEG5 Gm25643-201ENSMUST00000158874 103 ntBASIC2.05□□□□□ -2.08
Ccdc28bQ8CEG5 Gm22192-201ENSMUST00000175128 85 ntBASIC2.05□□□□□ -2.08
Ccdc28bQ8CEG5 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Ccdc28bQ8CEG5 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC2.05□□□□□ -2.08
Ccdc28bQ8CEG5 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.05□□□□□ -2.08
Ccdc28bQ8CEG5 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Ccdc28bQ8CEG5 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Ccdc28bQ8CEG5 Gm24316-201ENSMUST00000083041 107 ntBASIC2.05□□□□□ -2.08
Ccdc28bQ8CEG5 Gm25632-201ENSMUST00000083112 85 ntBASIC2.05□□□□□ -2.08
Ccdc28bQ8CEG5 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.04□□□□□ -2.08
Ccdc28bQ8CEG5 Gm23472-201ENSMUST00000101806 191 ntBASIC2.04□□□□□ -2.08
Ccdc28bQ8CEG5 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Ccdc28bQ8CEG5 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.04□□□□□ -2.08
Ccdc28bQ8CEG5 Gm14782-201ENSMUST00000120151 195 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms