Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm24837-201ENSMUST00000158683 81 ntBASIC2.26□□□□□ -2.05
Nup88Q8CEC0 Gm25836-201ENSMUST00000158918 123 ntBASIC2.26□□□□□ -2.05
Nup88Q8CEC0 Gm16038-201ENSMUST00000159317 193 ntBASIC2.26□□□□□ -2.05
Nup88Q8CEC0 Gm27878-201ENSMUST00000184000 106 ntBASIC2.26□□□□□ -2.05
Nup88Q8CEC0 Gm27544-201ENSMUST00000185069 155 ntBASIC2.26□□□□□ -2.05
Nup88Q8CEC0 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.26□□□□□ -2.05
Nup88Q8CEC0 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Nup88Q8CEC0 Gm45296-201ENSMUST00000209625 205 ntBASIC2.26□□□□□ -2.05
Nup88Q8CEC0 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.26□□□□□ -2.05
Nup88Q8CEC0 Gm22723-201ENSMUST00000083820 129 ntBASIC2.26□□□□□ -2.05
Nup88Q8CEC0 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.26□□□□□ -2.05
Nup88Q8CEC0 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Nup88Q8CEC0 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
Nup88Q8CEC0 Gm6829-201ENSMUST00000119858 360 ntBASIC2.25□□□□□ -2.05
Nup88Q8CEC0 Gm23120-201ENSMUST00000157654 287 ntBASIC2.25□□□□□ -2.05
Nup88Q8CEC0 Gm25671-201ENSMUST00000178612 105 ntBASIC2.25□□□□□ -2.05
Nup88Q8CEC0 Gm23307-201ENSMUST00000179167 105 ntBASIC2.25□□□□□ -2.05
Nup88Q8CEC0 Gm25286-201ENSMUST00000179790 105 ntBASIC2.25□□□□□ -2.05
Nup88Q8CEC0 Mir6950-201ENSMUST00000184438 73 ntBASIC2.25□□□□□ -2.05
Nup88Q8CEC0 Gm28717-201ENSMUST00000189950 315 ntBASIC2.25□□□□□ -2.05
Nup88Q8CEC0 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.25□□□□□ -2.05
Nup88Q8CEC0 Gm43427-201ENSMUST00000198188 331 ntBASIC2.25□□□□□ -2.05
Nup88Q8CEC0 Gm44794-201ENSMUST00000206550 411 ntBASIC2.25□□□□□ -2.05
Nup88Q8CEC0 AC125311.1-201ENSMUST00000226950 220 ntBASIC2.25□□□□□ -2.05
Nup88Q8CEC0 AC151833.1-201ENSMUST00000227752 574 ntBASIC2.25□□□□□ -2.05
Nup88Q8CEC0 Snord42a-201ENSMUST00000082606 65 ntBASIC2.25□□□□□ -2.05
Nup88Q8CEC0 Gm23377-201ENSMUST00000082943 126 ntBASIC2.25□□□□□ -2.05
Nup88Q8CEC0 Gm24044-201ENSMUST00000083107 156 ntBASIC2.25□□□□□ -2.05
Nup88Q8CEC0 Gm25124-201ENSMUST00000083345 164 ntBASIC2.25□□□□□ -2.05
Nup88Q8CEC0 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.25□□□□□ -2.05
Nup88Q8CEC0 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.24□□□□□ -2.05
Nup88Q8CEC0 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Nup88Q8CEC0 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Nup88Q8CEC0 Gm22494-201ENSMUST00000104495 128 ntBASIC2.24□□□□□ -2.05
Nup88Q8CEC0 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.24□□□□□ -2.05
Nup88Q8CEC0 Gm14980-201ENSMUST00000121247 736 ntBASIC2.24□□□□□ -2.05
Nup88Q8CEC0 Gm24598-201ENSMUST00000122510 74 ntBASIC2.24□□□□□ -2.05
Nup88Q8CEC0 Gm24896-201ENSMUST00000122741 135 ntBASIC2.24□□□□□ -2.05
Nup88Q8CEC0 Gm24504-201ENSMUST00000157679 100 ntBASIC2.24□□□□□ -2.05
Nup88Q8CEC0 Gm24394-201ENSMUST00000158141 123 ntBASIC2.24□□□□□ -2.05
Nup88Q8CEC0 Gm24348-201ENSMUST00000158710 130 ntBASIC2.24□□□□□ -2.05
Nup88Q8CEC0 Gm26157-201ENSMUST00000158974 126 ntBASIC2.24□□□□□ -2.05
Nup88Q8CEC0 Gm26400-201ENSMUST00000175012 85 ntBASIC2.24□□□□□ -2.05
Nup88Q8CEC0 Gm24308-201ENSMUST00000177773 114 ntBASIC2.24□□□□□ -2.05
Nup88Q8CEC0 Gm23793-201ENSMUST00000179396 117 ntBASIC2.24□□□□□ -2.05
Nup88Q8CEC0 Gm44482-201ENSMUST00000199232 103 ntBASIC2.24□□□□□ -2.05
Nup88Q8CEC0 AC192333.1-201ENSMUST00000224573 376 ntBASIC2.24□□□□□ -2.05
Nup88Q8CEC0 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Nup88Q8CEC0 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.23□□□□□ -2.05
Nup88Q8CEC0 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.23□□□□□ -2.05
Nup88Q8CEC0 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Nup88Q8CEC0 Mir872-201ENSMUST00000104728 81 ntBASIC2.23□□□□□ -2.05
Nup88Q8CEC0 Gm22554-201ENSMUST00000157798 147 ntBASIC2.23□□□□□ -2.05
Nup88Q8CEC0 Gm22085-201ENSMUST00000158344 110 ntBASIC2.23□□□□□ -2.05
Nup88Q8CEC0 Gm28257-201ENSMUST00000185244 463 ntBASIC2.23□□□□□ -2.05
Nup88Q8CEC0 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.23□□□□□ -2.05
Nup88Q8CEC0 Mir1291-201ENSMUST00000199842 117 ntBASIC2.23□□□□□ -2.05
Nup88Q8CEC0 Gm43505-201ENSMUST00000200579 139 ntBASIC2.23□□□□□ -2.05
Nup88Q8CEC0 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.23□□□□□ -2.05
Nup88Q8CEC0 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Nup88Q8CEC0 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.23□□□□□ -2.05
Nup88Q8CEC0 Gm25788-201ENSMUST00000082721 131 ntBASIC2.23□□□□□ -2.05
Nup88Q8CEC0 Snora34-201ENSMUST00000083402 138 ntBASIC2.23□□□□□ -2.05
Nup88Q8CEC0 Mir29c-201ENSMUST00000083614 88 ntBASIC2.23□□□□□ -2.05
Nup88Q8CEC0 Gm22032-201ENSMUST00000116946 116 ntBASIC2.22□□□□□ -2.05
Nup88Q8CEC0 Gm24478-201ENSMUST00000157439 158 ntBASIC2.22□□□□□ -2.05
Nup88Q8CEC0 Gm17100-201ENSMUST00000168963 272 ntBASIC2.22□□□□□ -2.05
Nup88Q8CEC0 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC2.22□□□□□ -2.05
Nup88Q8CEC0 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC2.22□□□□□ -2.05
Nup88Q8CEC0 Gm44308-201ENSMUST00000197080 99 ntBASIC2.22□□□□□ -2.05
Nup88Q8CEC0 Gm3724-201ENSMUST00000197957 349 ntBASIC2.22□□□□□ -2.05
Nup88Q8CEC0 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC2.22□□□□□ -2.05
Nup88Q8CEC0 Mir93-201ENSMUST00000083593 88 ntBASIC2.22□□□□□ -2.05
Nup88Q8CEC0 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
Nup88Q8CEC0 Gm24907-201ENSMUST00000116932 128 ntBASIC2.21□□□□□ -2.06
Nup88Q8CEC0 Gm14894-201ENSMUST00000117170 270 ntBASIC2.21□□□□□ -2.06
Nup88Q8CEC0 Gm11859-201ENSMUST00000118099 455 ntBASIC2.21□□□□□ -2.06
Nup88Q8CEC0 Gm13432-201ENSMUST00000118861 241 ntBASIC2.21□□□□□ -2.06
Nup88Q8CEC0 Gm26024-201ENSMUST00000158657 322 ntBASIC2.21□□□□□ -2.06
Nup88Q8CEC0 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Nup88Q8CEC0 Gm24799-201ENSMUST00000178431 79 ntBASIC2.21□□□□□ -2.06
Nup88Q8CEC0 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.21□□□□□ -2.06
Nup88Q8CEC0 Gm37557-201ENSMUST00000191640 139 ntBASIC2.21□□□□□ -2.06
Nup88Q8CEC0 Gm37449-201ENSMUST00000193016 270 ntBASIC2.21□□□□□ -2.06
Nup88Q8CEC0 Gm18658-201ENSMUST00000195558 270 ntBASIC2.21□□□□□ -2.06
Nup88Q8CEC0 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.21□□□□□ -2.06
Nup88Q8CEC0 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC2.21□□□□□ -2.06
Nup88Q8CEC0 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Nup88Q8CEC0 Gm22685-201ENSMUST00000082848 106 ntBASIC2.21□□□□□ -2.06
Nup88Q8CEC0 Gm25937-201ENSMUST00000083912 107 ntBASIC2.21□□□□□ -2.06
Nup88Q8CEC0 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.21□□□□□ -2.06
Nup88Q8CEC0 Gm25090-201ENSMUST00000104000 132 ntBASIC2.2□□□□□ -2.06
Nup88Q8CEC0 Gm25938-201ENSMUST00000104139 166 ntBASIC2.2□□□□□ -2.06
Nup88Q8CEC0 Gm25421-201ENSMUST00000104218 164 ntBASIC2.2□□□□□ -2.06
Nup88Q8CEC0 Gm24984-201ENSMUST00000104454 133 ntBASIC2.2□□□□□ -2.06
Nup88Q8CEC0 Gm23983-201ENSMUST00000157142 114 ntBASIC2.2□□□□□ -2.06
Nup88Q8CEC0 Gm23324-201ENSMUST00000157421 131 ntBASIC2.2□□□□□ -2.06
Nup88Q8CEC0 Gm25368-201ENSMUST00000158847 131 ntBASIC2.2□□□□□ -2.06
Nup88Q8CEC0 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC2.2□□□□□ -2.06
Nup88Q8CEC0 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 125 ms