Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Atg4aQ8C9S8 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.37□□□□□ -2.03
Atg4aQ8C9S8 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 Gm24835-201ENSMUST00000116777 111 ntBASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 Gm25543-201ENSMUST00000122678 312 ntBASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 Gm24630-201ENSMUST00000122768 106 ntBASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 Gm23548-201ENSMUST00000158963 106 ntBASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 Gm6788-201ENSMUST00000166459 270 ntBASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 Gm24799-201ENSMUST00000178431 79 ntBASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 Gm27997-201ENSMUST00000184942 69 ntBASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 Gm27544-201ENSMUST00000185069 155 ntBASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 Gm37801-201ENSMUST00000194754 274 ntBASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 Gm15235-201ENSMUST00000200572 194 ntBASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 Gm44459-201ENSMUST00000203926 160 ntBASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 Gm45005-201ENSMUST00000206640 157 ntBASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 Gm44938-201ENSMUST00000208614 427 ntBASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 AC164161.1-201ENSMUST00000214076 639 ntBASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Atg4aQ8C9S8 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Atg4aQ8C9S8 Mir542-201ENSMUST00000102186 85 ntBASIC2.35□□□□□ -2.03
Atg4aQ8C9S8 Gm12550-201ENSMUST00000118478 329 ntBASIC2.35□□□□□ -2.03
Atg4aQ8C9S8 Gm22814-201ENSMUST00000157452 104 ntBASIC2.35□□□□□ -2.03
Atg4aQ8C9S8 Gm24858-201ENSMUST00000158058 323 ntBASIC2.35□□□□□ -2.03
Atg4aQ8C9S8 Gm23581-201ENSMUST00000158531 63 ntBASIC2.35□□□□□ -2.03
Atg4aQ8C9S8 Gm24348-201ENSMUST00000158710 130 ntBASIC2.35□□□□□ -2.03
Atg4aQ8C9S8 Gm23355-201ENSMUST00000177614 107 ntBASIC2.35□□□□□ -2.03
Atg4aQ8C9S8 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Atg4aQ8C9S8 Gm23148-201ENSMUST00000180367 107 ntBASIC2.35□□□□□ -2.03
Atg4aQ8C9S8 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.35□□□□□ -2.03
Atg4aQ8C9S8 Gm37713-201ENSMUST00000191746 198 ntBASIC2.35□□□□□ -2.03
Atg4aQ8C9S8 Gm43193-201ENSMUST00000197732 441 ntBASIC2.35□□□□□ -2.03
Atg4aQ8C9S8 Gm43978-201ENSMUST00000203491 451 ntBASIC2.35□□□□□ -2.03
Atg4aQ8C9S8 Gm44655-201ENSMUST00000207768 423 ntBASIC2.35□□□□□ -2.03
Atg4aQ8C9S8 Gm44959-201ENSMUST00000209127 231 ntBASIC2.35□□□□□ -2.03
Atg4aQ8C9S8 Gm45296-201ENSMUST00000209625 205 ntBASIC2.35□□□□□ -2.03
Atg4aQ8C9S8 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.35□□□□□ -2.03
Atg4aQ8C9S8 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.35□□□□□ -2.03
Atg4aQ8C9S8 Gm23055-201ENSMUST00000082805 94 ntBASIC2.35□□□□□ -2.03
Atg4aQ8C9S8 Gm25258-201ENSMUST00000083049 107 ntBASIC2.35□□□□□ -2.03
Atg4aQ8C9S8 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Atg4aQ8C9S8 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.34□□□□□ -2.03
Atg4aQ8C9S8 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.34□□□□□ -2.03
Atg4aQ8C9S8 Gm14843-201ENSMUST00000119596 212 ntBASIC2.34□□□□□ -2.03
Atg4aQ8C9S8 Gm12304-201ENSMUST00000120312 385 ntBASIC2.34□□□□□ -2.03
Atg4aQ8C9S8 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Atg4aQ8C9S8 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.34□□□□□ -2.03
Atg4aQ8C9S8 Mir3103-201ENSMUST00000175474 67 ntBASIC2.34□□□□□ -2.03
Atg4aQ8C9S8 Gm43914-201ENSMUST00000203592 594 ntBASIC2.34□□□□□ -2.03
Atg4aQ8C9S8 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.34□□□□□ -2.03
Atg4aQ8C9S8 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.34□□□□□ -2.03
Atg4aQ8C9S8 Mir32-201ENSMUST00000083610 70 ntBASIC2.34□□□□□ -2.03
Atg4aQ8C9S8 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.34□□□□□ -2.03
Atg4aQ8C9S8 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Atg4aQ8C9S8 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.33□□□□□ -2.04
Atg4aQ8C9S8 Mir465b-1-201ENSMUST00000103940 79 ntBASIC2.33□□□□□ -2.04
Atg4aQ8C9S8 Mir465b-2-201ENSMUST00000104662 79 ntBASIC2.33□□□□□ -2.04
Atg4aQ8C9S8 Mir872-201ENSMUST00000104728 81 ntBASIC2.33□□□□□ -2.04
Atg4aQ8C9S8 Gm12513-201ENSMUST00000118617 352 ntBASIC2.33□□□□□ -2.04
Atg4aQ8C9S8 Gm24892-201ENSMUST00000122747 104 ntBASIC2.33□□□□□ -2.04
Atg4aQ8C9S8 Gm24911-201ENSMUST00000157292 136 ntBASIC2.33□□□□□ -2.04
Atg4aQ8C9S8 Gm22227-201ENSMUST00000157356 259 ntBASIC2.33□□□□□ -2.04
Atg4aQ8C9S8 Gm23589-201ENSMUST00000157660 105 ntBASIC2.33□□□□□ -2.04
Atg4aQ8C9S8 Gm28744-201ENSMUST00000189939 340 ntBASIC2.33□□□□□ -2.04
Atg4aQ8C9S8 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.33□□□□□ -2.04
Atg4aQ8C9S8 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.33□□□□□ -2.04
Atg4aQ8C9S8 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Atg4aQ8C9S8 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Atg4aQ8C9S8 Gm9174-201ENSMUST00000078149 255 ntBASIC2.33□□□□□ -2.04
Atg4aQ8C9S8 Gm24152-201ENSMUST00000082764 163 ntBASIC2.33□□□□□ -2.04
Atg4aQ8C9S8 Gm25199-201ENSMUST00000083095 104 ntBASIC2.33□□□□□ -2.04
Atg4aQ8C9S8 Gm23462-201ENSMUST00000083264 104 ntBASIC2.33□□□□□ -2.04
Atg4aQ8C9S8 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 Gm14894-201ENSMUST00000117170 270 ntBASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 Gm12646-201ENSMUST00000119144 238 ntBASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 Gm11572-201ENSMUST00000119164 120 ntBASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 Gm26200-201ENSMUST00000180273 79 ntBASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 Gm18357-201ENSMUST00000188184 580 ntBASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 Gm37449-201ENSMUST00000193016 270 ntBASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 Gm18658-201ENSMUST00000195558 270 ntBASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 Gm44055-201ENSMUST00000204376 247 ntBASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 Gm44533-201ENSMUST00000207782 268 ntBASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 Gm45313-201ENSMUST00000210584 178 ntBASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 Gm22062-201ENSMUST00000082563 107 ntBASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 Gm22683-201ENSMUST00000082854 137 ntBASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 Gm25124-201ENSMUST00000083345 164 ntBASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 Mir322-201ENSMUST00000083484 95 ntBASIC2.32□□□□□ -2.04
Atg4aQ8C9S8 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms