Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm23042-201ENSMUST00000083866 101 ntBASIC3.81□□□□□ -1.8
Usp40Q8BWR4 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.81□□□□□ -1.8
Usp40Q8BWR4 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Usp40Q8BWR4 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.8□□□□□ -1.8
Usp40Q8BWR4 Gm13343-201ENSMUST00000116474 105 ntBASIC3.8□□□□□ -1.8
Usp40Q8BWR4 Gm25805-201ENSMUST00000122788 108 ntBASIC3.8□□□□□ -1.8
Usp40Q8BWR4 Gm22036-201ENSMUST00000157279 215 ntBASIC3.8□□□□□ -1.8
Usp40Q8BWR4 Gm24291-201ENSMUST00000157633 162 ntBASIC3.8□□□□□ -1.8
Usp40Q8BWR4 Gm20718-201ENSMUST00000176058 259 ntBASIC3.8□□□□□ -1.8
Usp40Q8BWR4 Gm27718-201ENSMUST00000183721 86 ntBASIC3.8□□□□□ -1.8
Usp40Q8BWR4 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.8□□□□□ -1.8
Usp40Q8BWR4 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Usp40Q8BWR4 Gm43955-201ENSMUST00000204332 142 ntBASIC3.8□□□□□ -1.8
Usp40Q8BWR4 Gm25136-201ENSMUST00000083253 115 ntBASIC3.8□□□□□ -1.8
Usp40Q8BWR4 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Usp40Q8BWR4 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Usp40Q8BWR4 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.79□□□□□ -1.8
Usp40Q8BWR4 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.79□□□□□ -1.8
Usp40Q8BWR4 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.79□□□□□ -1.8
Usp40Q8BWR4 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Usp40Q8BWR4 Mdga2-203ENSMUST00000113942 423 ntBASIC3.79□□□□□ -1.8
Usp40Q8BWR4 Gm25364-201ENSMUST00000158851 107 ntBASIC3.79□□□□□ -1.8
Usp40Q8BWR4 Gm23415-201ENSMUST00000175519 83 ntBASIC3.79□□□□□ -1.8
Usp40Q8BWR4 Gm22775-201ENSMUST00000177630 120 ntBASIC3.79□□□□□ -1.8
Usp40Q8BWR4 Gm23569-201ENSMUST00000180120 120 ntBASIC3.79□□□□□ -1.8
Usp40Q8BWR4 Gm38332-201ENSMUST00000194189 147 ntBASIC3.79□□□□□ -1.8
Usp40Q8BWR4 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC3.79□□□□□ -1.8
Usp40Q8BWR4 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Usp40Q8BWR4 Gm26458-201ENSMUST00000082832 128 ntBASIC3.79□□□□□ -1.8
Usp40Q8BWR4 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.79□□□□□ -1.8
Usp40Q8BWR4 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Usp40Q8BWR4 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Usp40Q8BWR4 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.78□□□□□ -1.8
Usp40Q8BWR4 Gm5967-201ENSMUST00000172723 494 ntBASIC3.78□□□□□ -1.8
Usp40Q8BWR4 Gm43563-201ENSMUST00000196761 198 ntBASIC3.78□□□□□ -1.8
Usp40Q8BWR4 Gm44052-201ENSMUST00000203382 396 ntBASIC3.78□□□□□ -1.8
Usp40Q8BWR4 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.78□□□□□ -1.8
Usp40Q8BWR4 Gm5358-201ENSMUST00000212814 353 ntBASIC3.78□□□□□ -1.8
Usp40Q8BWR4 Snora70-201ENSMUST00000083047 137 ntBASIC3.78□□□□□ -1.8
Usp40Q8BWR4 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Usp40Q8BWR4 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Usp40Q8BWR4 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Usp40Q8BWR4 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Usp40Q8BWR4 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
Usp40Q8BWR4 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Usp40Q8BWR4 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.77□□□□□ -1.81
Usp40Q8BWR4 Gm22782-201ENSMUST00000104082 132 ntBASIC3.77□□□□□ -1.81
Usp40Q8BWR4 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC3.77□□□□□ -1.81
Usp40Q8BWR4 Gm12238-201ENSMUST00000127764 124 ntBASIC3.77□□□□□ -1.81
Usp40Q8BWR4 Gm26049-201ENSMUST00000157313 108 ntBASIC3.77□□□□□ -1.81
Usp40Q8BWR4 Gm23260-201ENSMUST00000158317 172 ntBASIC3.77□□□□□ -1.81
Usp40Q8BWR4 Gm23196-201ENSMUST00000158806 107 ntBASIC3.77□□□□□ -1.81
Usp40Q8BWR4 Gm24666-201ENSMUST00000158937 167 ntBASIC3.77□□□□□ -1.81
Usp40Q8BWR4 Gm24816-201ENSMUST00000175311 151 ntBASIC3.77□□□□□ -1.81
Usp40Q8BWR4 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.77□□□□□ -1.81
Usp40Q8BWR4 Gm24966-201ENSMUST00000082443 79 ntBASIC3.77□□□□□ -1.81
Usp40Q8BWR4 Gm25896-201ENSMUST00000083713 136 ntBASIC3.77□□□□□ -1.81
Usp40Q8BWR4 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Usp40Q8BWR4 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Usp40Q8BWR4 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Usp40Q8BWR4 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.76□□□□□ -1.81
Usp40Q8BWR4 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.76□□□□□ -1.81
Usp40Q8BWR4 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC3.76□□□□□ -1.81
Usp40Q8BWR4 Gm16354-201ENSMUST00000155376 150 ntBASIC3.76□□□□□ -1.81
Usp40Q8BWR4 Gm22561-201ENSMUST00000157331 84 ntBASIC3.76□□□□□ -1.81
Usp40Q8BWR4 Gm25424-201ENSMUST00000157612 58 ntBASIC3.76□□□□□ -1.81
Usp40Q8BWR4 Gm16546-201ENSMUST00000159442 355 ntBASIC3.76□□□□□ -1.81
Usp40Q8BWR4 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.76□□□□□ -1.81
Usp40Q8BWR4 Trbv6-201ENSMUST00000193743 276 ntBASIC3.76□□□□□ -1.81
Usp40Q8BWR4 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.76□□□□□ -1.81
Usp40Q8BWR4 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.76□□□□□ -1.81
Usp40Q8BWR4 Gm23738-201ENSMUST00000082828 171 ntBASIC3.76□□□□□ -1.81
Usp40Q8BWR4 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.76□□□□□ -1.81
Usp40Q8BWR4 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.75□□□□□ -1.81
Usp40Q8BWR4 Gm26140-201ENSMUST00000103807 110 ntBASIC3.75□□□□□ -1.81
Usp40Q8BWR4 Gm13432-201ENSMUST00000118861 241 ntBASIC3.75□□□□□ -1.81
Usp40Q8BWR4 Gm22883-201ENSMUST00000157376 106 ntBASIC3.75□□□□□ -1.81
Usp40Q8BWR4 Gm24010-201ENSMUST00000157731 282 ntBASIC3.75□□□□□ -1.81
Usp40Q8BWR4 Gm24552-201ENSMUST00000158646 103 ntBASIC3.75□□□□□ -1.81
Usp40Q8BWR4 Gm22476-201ENSMUST00000158902 100 ntBASIC3.75□□□□□ -1.81
Usp40Q8BWR4 Gm22500-201ENSMUST00000158982 99 ntBASIC3.75□□□□□ -1.81
Usp40Q8BWR4 Gm22908-201ENSMUST00000177620 110 ntBASIC3.75□□□□□ -1.81
Usp40Q8BWR4 Gm44256-201ENSMUST00000203304 335 ntBASIC3.75□□□□□ -1.81
Usp40Q8BWR4 Gm44703-201ENSMUST00000205724 248 ntBASIC3.75□□□□□ -1.81
Usp40Q8BWR4 Gm18617-201ENSMUST00000222311 259 ntBASIC3.75□□□□□ -1.81
Usp40Q8BWR4 Gm25895-201ENSMUST00000083714 100 ntBASIC3.75□□□□□ -1.81
Usp40Q8BWR4 Gm23847-201ENSMUST00000083829 110 ntBASIC3.75□□□□□ -1.81
Usp40Q8BWR4 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Usp40Q8BWR4 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Usp40Q8BWR4 Gm22373-201ENSMUST00000104584 89 ntBASIC3.74□□□□□ -1.81
Usp40Q8BWR4 Mir1298-201ENSMUST00000116681 98 ntBASIC3.74□□□□□ -1.81
Usp40Q8BWR4 Gm14947-201ENSMUST00000133704 303 ntBASIC3.74□□□□□ -1.81
Usp40Q8BWR4 Gm23536-201ENSMUST00000157541 134 ntBASIC3.74□□□□□ -1.81
Usp40Q8BWR4 Gm25069-201ENSMUST00000175238 86 ntBASIC3.74□□□□□ -1.81
Usp40Q8BWR4 Mir3103-201ENSMUST00000175474 67 ntBASIC3.74□□□□□ -1.81
Usp40Q8BWR4 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.74□□□□□ -1.81
Usp40Q8BWR4 Gm44030-201ENSMUST00000204865 432 ntBASIC3.74□□□□□ -1.81
Usp40Q8BWR4 AC100209.2-201ENSMUST00000224461 451 ntBASIC3.74□□□□□ -1.81
Usp40Q8BWR4 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Usp40Q8BWR4 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 134.6 ms