Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm23841-201ENSMUST00000116951 114 ntBASIC2.52□□□□□ -2.01
Usp43Q8BUM9 Gm22321-201ENSMUST00000157152 104 ntBASIC2.52□□□□□ -2.01
Usp43Q8BUM9 Gm23892-201ENSMUST00000158105 130 ntBASIC2.52□□□□□ -2.01
Usp43Q8BUM9 Gm23223-201ENSMUST00000158119 127 ntBASIC2.52□□□□□ -2.01
Usp43Q8BUM9 Gm24212-201ENSMUST00000158258 132 ntBASIC2.52□□□□□ -2.01
Usp43Q8BUM9 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.52□□□□□ -2.01
Usp43Q8BUM9 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Usp43Q8BUM9 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Usp43Q8BUM9 Gm4468-201ENSMUST00000170206 294 ntBASIC2.52□□□□□ -2.01
Usp43Q8BUM9 Gm7958-201ENSMUST00000178255 468 ntBASIC2.52□□□□□ -2.01
Usp43Q8BUM9 Gm7950-201ENSMUST00000179633 468 ntBASIC2.52□□□□□ -2.01
Usp43Q8BUM9 Gm29657-201ENSMUST00000189807 342 ntBASIC2.52□□□□□ -2.01
Usp43Q8BUM9 Gm29262-201ENSMUST00000190084 196 ntBASIC2.52□□□□□ -2.01
Usp43Q8BUM9 Gm44429-201ENSMUST00000203542 186 ntBASIC2.52□□□□□ -2.01
Usp43Q8BUM9 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.52□□□□□ -2.01
Usp43Q8BUM9 Gm25930-201ENSMUST00000082785 107 ntBASIC2.52□□□□□ -2.01
Usp43Q8BUM9 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Usp43Q8BUM9 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Usp43Q8BUM9 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Usp43Q8BUM9 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Usp43Q8BUM9 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Usp43Q8BUM9 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.51□□□□□ -2.01
Usp43Q8BUM9 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.51□□□□□ -2.01
Usp43Q8BUM9 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.51□□□□□ -2.01
Usp43Q8BUM9 Gm22784-201ENSMUST00000104088 132 ntBASIC2.51□□□□□ -2.01
Usp43Q8BUM9 Gm5396-201ENSMUST00000121222 532 ntBASIC2.51□□□□□ -2.01
Usp43Q8BUM9 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.51□□□□□ -2.01
Usp43Q8BUM9 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Usp43Q8BUM9 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Usp43Q8BUM9 Gm25235-201ENSMUST00000179933 107 ntBASIC2.51□□□□□ -2.01
Usp43Q8BUM9 Mir7014-201ENSMUST00000183853 63 ntBASIC2.51□□□□□ -2.01
Usp43Q8BUM9 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.51□□□□□ -2.01
Usp43Q8BUM9 Mir465d-201ENSMUST00000196314 58 ntBASIC2.51□□□□□ -2.01
Usp43Q8BUM9 Gm45508-201ENSMUST00000209298 299 ntBASIC2.51□□□□□ -2.01
Usp43Q8BUM9 Gm7065-201ENSMUST00000222150 474 ntBASIC2.51□□□□□ -2.01
Usp43Q8BUM9 CT954323.1-201ENSMUST00000222774 229 ntBASIC2.51□□□□□ -2.01
Usp43Q8BUM9 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.51□□□□□ -2.01
Usp43Q8BUM9 Gm26225-201ENSMUST00000082508 135 ntBASIC2.51□□□□□ -2.01
Usp43Q8BUM9 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Usp43Q8BUM9 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Usp43Q8BUM9 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.5□□□□□ -2.01
Usp43Q8BUM9 Gm13862-201ENSMUST00000121220 197 ntBASIC2.5□□□□□ -2.01
Usp43Q8BUM9 Gm25270-201ENSMUST00000122606 138 ntBASIC2.5□□□□□ -2.01
Usp43Q8BUM9 Gm23982-201ENSMUST00000157141 106 ntBASIC2.5□□□□□ -2.01
Usp43Q8BUM9 Gm23589-201ENSMUST00000157660 105 ntBASIC2.5□□□□□ -2.01
Usp43Q8BUM9 Gm22537-201ENSMUST00000158172 199 ntBASIC2.5□□□□□ -2.01
Usp43Q8BUM9 Gm26024-201ENSMUST00000158657 322 ntBASIC2.5□□□□□ -2.01
Usp43Q8BUM9 Gm22192-201ENSMUST00000175128 85 ntBASIC2.5□□□□□ -2.01
Usp43Q8BUM9 Gm22259-201ENSMUST00000178926 107 ntBASIC2.5□□□□□ -2.01
Usp43Q8BUM9 Gm3852-201ENSMUST00000182781 264 ntBASIC2.5□□□□□ -2.01
Usp43Q8BUM9 Gm27220-201ENSMUST00000183453 262 ntBASIC2.5□□□□□ -2.01
Usp43Q8BUM9 Gm28453-203ENSMUST00000187041 189 ntBASIC2.5□□□□□ -2.01
Usp43Q8BUM9 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC2.5□□□□□ -2.01
Usp43Q8BUM9 Gm19123-201ENSMUST00000190716 651 ntBASIC2.5□□□□□ -2.01
Usp43Q8BUM9 Trbv6-201ENSMUST00000193743 276 ntBASIC2.5□□□□□ -2.01
Usp43Q8BUM9 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Usp43Q8BUM9 Gm8031-201ENSMUST00000213430 626 ntBASIC2.5□□□□□ -2.01
Usp43Q8BUM9 Gm22622-201ENSMUST00000082870 129 ntBASIC2.5□□□□□ -2.01
Usp43Q8BUM9 Gm25632-201ENSMUST00000083112 85 ntBASIC2.5□□□□□ -2.01
Usp43Q8BUM9 Mir181b-2-201ENSMUST00000083644 89 ntBASIC2.5□□□□□ -2.01
Usp43Q8BUM9 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Usp43Q8BUM9 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Usp43Q8BUM9 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.5□□□□□ -2.01
Usp43Q8BUM9 Gm24122-201ENSMUST00000104107 132 ntBASIC2.49□□□□□ -2.01
Usp43Q8BUM9 Gm15846-201ENSMUST00000116022 320 ntBASIC2.49□□□□□ -2.01
Usp43Q8BUM9 Gm12417-201ENSMUST00000119153 403 ntBASIC2.49□□□□□ -2.01
Usp43Q8BUM9 Gm24475-201ENSMUST00000157435 143 ntBASIC2.49□□□□□ -2.01
Usp43Q8BUM9 Gm24392-201ENSMUST00000158136 103 ntBASIC2.49□□□□□ -2.01
Usp43Q8BUM9 Gm24922-201ENSMUST00000158511 102 ntBASIC2.49□□□□□ -2.01
Usp43Q8BUM9 Gm24667-201ENSMUST00000158938 103 ntBASIC2.49□□□□□ -2.01
Usp43Q8BUM9 Gm22450-201ENSMUST00000179641 107 ntBASIC2.49□□□□□ -2.01
Usp43Q8BUM9 Gm25473-201ENSMUST00000180191 107 ntBASIC2.49□□□□□ -2.01
Usp43Q8BUM9 Gm27470-201ENSMUST00000184070 210 ntBASIC2.49□□□□□ -2.01
Usp43Q8BUM9 Mir7050-201ENSMUST00000184636 60 ntBASIC2.49□□□□□ -2.01
Usp43Q8BUM9 Gm27421-201ENSMUST00000184729 167 ntBASIC2.49□□□□□ -2.01
Usp43Q8BUM9 Mir6540-201ENSMUST00000184886 108 ntBASIC2.49□□□□□ -2.01
Usp43Q8BUM9 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.49□□□□□ -2.01
Usp43Q8BUM9 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.49□□□□□ -2.01
Usp43Q8BUM9 Gm24856-201ENSMUST00000082809 107 ntBASIC2.49□□□□□ -2.01
Usp43Q8BUM9 Gm26071-201ENSMUST00000083261 107 ntBASIC2.49□□□□□ -2.01
Usp43Q8BUM9 Gm24521-201ENSMUST00000083958 107 ntBASIC2.49□□□□□ -2.01
Usp43Q8BUM9 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Usp43Q8BUM9 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Usp43Q8BUM9 Mir541-201ENSMUST00000102097 90 ntBASIC2.48□□□□□ -2.01
Usp43Q8BUM9 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Usp43Q8BUM9 Mir344c-201ENSMUST00000103919 92 ntBASIC2.48□□□□□ -2.01
Usp43Q8BUM9 Gm12797-201ENSMUST00000118645 273 ntBASIC2.48□□□□□ -2.01
Usp43Q8BUM9 Gm15162-201ENSMUST00000119325 283 ntBASIC2.48□□□□□ -2.01
Usp43Q8BUM9 Gm14069-201ENSMUST00000120815 229 ntBASIC2.48□□□□□ -2.01
Usp43Q8BUM9 Gm24892-201ENSMUST00000122747 104 ntBASIC2.48□□□□□ -2.01
Usp43Q8BUM9 Gm22215-201ENSMUST00000157558 96 ntBASIC2.48□□□□□ -2.01
Usp43Q8BUM9 Gm22527-201ENSMUST00000158816 106 ntBASIC2.48□□□□□ -2.01
Usp43Q8BUM9 Gm25024-201ENSMUST00000179667 104 ntBASIC2.48□□□□□ -2.01
Usp43Q8BUM9 Gm27540-201ENSMUST00000184950 187 ntBASIC2.48□□□□□ -2.01
Usp43Q8BUM9 Gm44476-201ENSMUST00000196225 91 ntBASIC2.48□□□□□ -2.01
Usp43Q8BUM9 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.48□□□□□ -2.01
Usp43Q8BUM9 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC2.48□□□□□ -2.01
Usp43Q8BUM9 Gm45522-201ENSMUST00000210784 166 ntBASIC2.48□□□□□ -2.01
Usp43Q8BUM9 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.48□□□□□ -2.01
Usp43Q8BUM9 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms