Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Gm25119-201ENSMUST00000158815 88 ntBASIC2.59□□□□□ -1.99
Lig4Q8BTF7 Mir3075-201ENSMUST00000175340 85 ntBASIC2.59□□□□□ -1.99
Lig4Q8BTF7 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.59□□□□□ -1.99
Lig4Q8BTF7 Gm38311-201ENSMUST00000192945 165 ntBASIC2.59□□□□□ -1.99
Lig4Q8BTF7 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.59□□□□□ -1.99
Lig4Q8BTF7 Mir376a-201ENSMUST00000197584 68 ntBASIC2.59□□□□□ -1.99
Lig4Q8BTF7 Gm44903-201ENSMUST00000206840 130 ntBASIC2.59□□□□□ -1.99
Lig4Q8BTF7 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.59□□□□□ -1.99
Lig4Q8BTF7 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.59□□□□□ -1.99
Lig4Q8BTF7 Gm6030-201ENSMUST00000078768 402 ntBASIC2.59□□□□□ -1.99
Lig4Q8BTF7 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.59□□□□□ -1.99
Lig4Q8BTF7 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.59□□□□□ -2
Lig4Q8BTF7 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Lig4Q8BTF7 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Lig4Q8BTF7 Gm26341-201ENSMUST00000104561 134 ntBASIC2.58□□□□□ -2
Lig4Q8BTF7 Gm23889-201ENSMUST00000122689 104 ntBASIC2.58□□□□□ -2
Lig4Q8BTF7 Gm3852-201ENSMUST00000182781 264 ntBASIC2.58□□□□□ -2
Lig4Q8BTF7 Mir6386-201ENSMUST00000183558 104 ntBASIC2.58□□□□□ -2
Lig4Q8BTF7 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.58□□□□□ -2
Lig4Q8BTF7 Gm44010-201ENSMUST00000204432 331 ntBASIC2.58□□□□□ -2
Lig4Q8BTF7 Gm6796-201ENSMUST00000211919 243 ntBASIC2.58□□□□□ -2
Lig4Q8BTF7 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.58□□□□□ -2
Lig4Q8BTF7 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.58□□□□□ -2
Lig4Q8BTF7 Gm25078-201ENSMUST00000082530 107 ntBASIC2.58□□□□□ -2
Lig4Q8BTF7 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.58□□□□□ -2
Lig4Q8BTF7 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Lig4Q8BTF7 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Lig4Q8BTF7 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Lig4Q8BTF7 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.57□□□□□ -2
Lig4Q8BTF7 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Lig4Q8BTF7 Gm22752-201ENSMUST00000102083 109 ntBASIC2.57□□□□□ -2
Lig4Q8BTF7 Gm22270-201ENSMUST00000104034 132 ntBASIC2.57□□□□□ -2
Lig4Q8BTF7 Gm25875-201ENSMUST00000104323 107 ntBASIC2.57□□□□□ -2
Lig4Q8BTF7 Gm15846-201ENSMUST00000116022 320 ntBASIC2.57□□□□□ -2
Lig4Q8BTF7 Gm23841-201ENSMUST00000116951 114 ntBASIC2.57□□□□□ -2
Lig4Q8BTF7 Gm12513-201ENSMUST00000118617 352 ntBASIC2.57□□□□□ -2
Lig4Q8BTF7 Gm26186-201ENSMUST00000157689 125 ntBASIC2.57□□□□□ -2
Lig4Q8BTF7 Gm24750-201ENSMUST00000157843 104 ntBASIC2.57□□□□□ -2
Lig4Q8BTF7 Gm26406-201ENSMUST00000158503 124 ntBASIC2.57□□□□□ -2
Lig4Q8BTF7 Gm6788-201ENSMUST00000166459 270 ntBASIC2.57□□□□□ -2
Lig4Q8BTF7 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Lig4Q8BTF7 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.57□□□□□ -2
Lig4Q8BTF7 Gm23921-201ENSMUST00000175258 107 ntBASIC2.57□□□□□ -2
Lig4Q8BTF7 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.57□□□□□ -2
Lig4Q8BTF7 Gm43193-201ENSMUST00000197732 441 ntBASIC2.57□□□□□ -2
Lig4Q8BTF7 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.57□□□□□ -2
Lig4Q8BTF7 Gm15235-201ENSMUST00000200572 194 ntBASIC2.57□□□□□ -2
Lig4Q8BTF7 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC2.57□□□□□ -2
Lig4Q8BTF7 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.57□□□□□ -2
Lig4Q8BTF7 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.57□□□□□ -2
Lig4Q8BTF7 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.57□□□□□ -2
Lig4Q8BTF7 Snord47-201ENSMUST00000083034 77 ntBASIC2.57□□□□□ -2
Lig4Q8BTF7 Mir127-201ENSMUST00000093568 70 ntBASIC2.57□□□□□ -2
Lig4Q8BTF7 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.57□□□□□ -2
Lig4Q8BTF7 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Lig4Q8BTF7 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
Lig4Q8BTF7 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.56□□□□□ -2
Lig4Q8BTF7 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Lig4Q8BTF7 Gm23578-201ENSMUST00000103943 104 ntBASIC2.56□□□□□ -2
Lig4Q8BTF7 Gm24282-201ENSMUST00000104232 66 ntBASIC2.56□□□□□ -2
Lig4Q8BTF7 Gm14894-201ENSMUST00000117170 270 ntBASIC2.56□□□□□ -2
Lig4Q8BTF7 Gm14402-201ENSMUST00000122217 508 ntBASIC2.56□□□□□ -2
Lig4Q8BTF7 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.56□□□□□ -2
Lig4Q8BTF7 Gm23232-201ENSMUST00000157300 105 ntBASIC2.56□□□□□ -2
Lig4Q8BTF7 Gm22527-201ENSMUST00000158816 106 ntBASIC2.56□□□□□ -2
Lig4Q8BTF7 Gm23476-201ENSMUST00000158881 274 ntBASIC2.56□□□□□ -2
Lig4Q8BTF7 Gm23190-201ENSMUST00000180307 64 ntBASIC2.56□□□□□ -2
Lig4Q8BTF7 Gm37449-201ENSMUST00000193016 270 ntBASIC2.56□□□□□ -2
Lig4Q8BTF7 Gm18658-201ENSMUST00000195558 270 ntBASIC2.56□□□□□ -2
Lig4Q8BTF7 Gm44322-201ENSMUST00000196830 115 ntBASIC2.56□□□□□ -2
Lig4Q8BTF7 Mir3068-202ENSMUST00000197755 79 ntBASIC2.56□□□□□ -2
Lig4Q8BTF7 Gm44459-201ENSMUST00000203926 160 ntBASIC2.56□□□□□ -2
Lig4Q8BTF7 Gm45002-201ENSMUST00000208045 120 ntBASIC2.56□□□□□ -2
Lig4Q8BTF7 CT954323.1-201ENSMUST00000222774 229 ntBASIC2.56□□□□□ -2
Lig4Q8BTF7 AC158982.2-201ENSMUST00000226283 184 ntBASIC2.56□□□□□ -2
Lig4Q8BTF7 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.56□□□□□ -2
Lig4Q8BTF7 Mir32-201ENSMUST00000083610 70 ntBASIC2.56□□□□□ -2
Lig4Q8BTF7 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Lig4Q8BTF7 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.55□□□□□ -2
Lig4Q8BTF7 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
Lig4Q8BTF7 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
Lig4Q8BTF7 Gm23202-201ENSMUST00000104376 129 ntBASIC2.55□□□□□ -2
Lig4Q8BTF7 Gm6954-201ENSMUST00000117416 225 ntBASIC2.55□□□□□ -2
Lig4Q8BTF7 Gm12721-201ENSMUST00000120621 268 ntBASIC2.55□□□□□ -2
Lig4Q8BTF7 Gm25269-201ENSMUST00000122601 104 ntBASIC2.55□□□□□ -2
Lig4Q8BTF7 Gm23599-201ENSMUST00000157261 251 ntBASIC2.55□□□□□ -2
Lig4Q8BTF7 Gm22517-201ENSMUST00000158265 136 ntBASIC2.55□□□□□ -2
Lig4Q8BTF7 Gm23005-201ENSMUST00000158950 136 ntBASIC2.55□□□□□ -2
Lig4Q8BTF7 Gm17528-201ENSMUST00000171026 239 ntBASIC2.55□□□□□ -2
Lig4Q8BTF7 Gm23355-201ENSMUST00000177614 107 ntBASIC2.55□□□□□ -2
Lig4Q8BTF7 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Lig4Q8BTF7 Gm23148-201ENSMUST00000180367 107 ntBASIC2.55□□□□□ -2
Lig4Q8BTF7 Gm44977-201ENSMUST00000205283 420 ntBASIC2.55□□□□□ -2
Lig4Q8BTF7 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Lig4Q8BTF7 Gm25258-201ENSMUST00000083049 107 ntBASIC2.55□□□□□ -2
Lig4Q8BTF7 Gm22973-201ENSMUST00000083298 191 ntBASIC2.55□□□□□ -2
Lig4Q8BTF7 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.55□□□□□ -2
Lig4Q8BTF7 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Lig4Q8BTF7 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Lig4Q8BTF7 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms