Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm22664-201ENSMUST00000158719 105 ntBASIC1.59□□□□□ -2.15
Ccdc40Q8BI79 Gm29603-201ENSMUST00000186792 334 ntBASIC1.59□□□□□ -2.15
Ccdc40Q8BI79 Gm5001-201ENSMUST00000204361 331 ntBASIC1.59□□□□□ -2.15
Ccdc40Q8BI79 Gm21937-201ENSMUST00000222825 218 ntBASIC1.59□□□□□ -2.15
Ccdc40Q8BI79 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Ccdc40Q8BI79 Mir340-201ENSMUST00000083483 98 ntBASIC1.59□□□□□ -2.15
Ccdc40Q8BI79 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Ccdc40Q8BI79 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Ccdc40Q8BI79 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Ccdc40Q8BI79 Gm6829-201ENSMUST00000119858 360 ntBASIC1.58□□□□□ -2.16
Ccdc40Q8BI79 Gm11358-201ENSMUST00000122310 373 ntBASIC1.58□□□□□ -2.16
Ccdc40Q8BI79 Gm22963-201ENSMUST00000157960 91 ntBASIC1.58□□□□□ -2.16
Ccdc40Q8BI79 Gm24177-201ENSMUST00000158927 131 ntBASIC1.58□□□□□ -2.16
Ccdc40Q8BI79 Gm18588-201ENSMUST00000177308 492 ntBASIC1.58□□□□□ -2.16
Ccdc40Q8BI79 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.58□□□□□ -2.16
Ccdc40Q8BI79 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.58□□□□□ -2.16
Ccdc40Q8BI79 Mir7026-201ENSMUST00000184384 67 ntBASIC1.58□□□□□ -2.16
Ccdc40Q8BI79 Gm29613-201ENSMUST00000185846 313 ntBASIC1.58□□□□□ -2.16
Ccdc40Q8BI79 Gm29544-201ENSMUST00000188860 313 ntBASIC1.58□□□□□ -2.16
Ccdc40Q8BI79 Gm28808-201ENSMUST00000190978 313 ntBASIC1.58□□□□□ -2.16
Ccdc40Q8BI79 Gm19901-201ENSMUST00000192191 495 ntBASIC1.58□□□□□ -2.16
Ccdc40Q8BI79 Gm18433-201ENSMUST00000192747 197 ntBASIC1.58□□□□□ -2.16
Ccdc40Q8BI79 Gm37054-201ENSMUST00000193481 543 ntBASIC1.58□□□□□ -2.16
Ccdc40Q8BI79 Gm43487-201ENSMUST00000200331 1031 ntBASIC1.58□□□□□ -2.16
Ccdc40Q8BI79 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Ccdc40Q8BI79 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.58□□□□□ -2.16
Ccdc40Q8BI79 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Ccdc40Q8BI79 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.57□□□□□ -2.16
Ccdc40Q8BI79 Gm23907-201ENSMUST00000104595 189 ntBASIC1.57□□□□□ -2.16
Ccdc40Q8BI79 Gm26249-201ENSMUST00000116708 118 ntBASIC1.57□□□□□ -2.16
Ccdc40Q8BI79 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Ccdc40Q8BI79 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC1.57□□□□□ -2.16
Ccdc40Q8BI79 Gm24438-201ENSMUST00000157893 115 ntBASIC1.57□□□□□ -2.16
Ccdc40Q8BI79 Gm24394-201ENSMUST00000158141 123 ntBASIC1.57□□□□□ -2.16
Ccdc40Q8BI79 Gm22862-201ENSMUST00000178593 121 ntBASIC1.57□□□□□ -2.16
Ccdc40Q8BI79 Gm28848-201ENSMUST00000189984 168 ntBASIC1.57□□□□□ -2.16
Ccdc40Q8BI79 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.57□□□□□ -2.16
Ccdc40Q8BI79 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.57□□□□□ -2.16
Ccdc40Q8BI79 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Ccdc40Q8BI79 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.56□□□□□ -2.16
Ccdc40Q8BI79 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.56□□□□□ -2.16
Ccdc40Q8BI79 n-R5s207-201ENSMUST00000122497 118 ntBASIC1.56□□□□□ -2.16
Ccdc40Q8BI79 Gm23048-201ENSMUST00000157237 129 ntBASIC1.56□□□□□ -2.16
Ccdc40Q8BI79 Gm25491-201ENSMUST00000158733 308 ntBASIC1.56□□□□□ -2.16
Ccdc40Q8BI79 Gm26435-201ENSMUST00000179026 107 ntBASIC1.56□□□□□ -2.16
Ccdc40Q8BI79 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.56□□□□□ -2.16
Ccdc40Q8BI79 Gm23515-201ENSMUST00000082829 107 ntBASIC1.56□□□□□ -2.16
Ccdc40Q8BI79 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.56□□□□□ -2.16
Ccdc40Q8BI79 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.56□□□□□ -2.16
Ccdc40Q8BI79 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Ccdc40Q8BI79 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Ccdc40Q8BI79 Gm25759-201ENSMUST00000103988 129 ntBASIC1.55□□□□□ -2.16
Ccdc40Q8BI79 Gm14287-201ENSMUST00000121060 117 ntBASIC1.55□□□□□ -2.16
Ccdc40Q8BI79 Gm25543-201ENSMUST00000122678 312 ntBASIC1.55□□□□□ -2.16
Ccdc40Q8BI79 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.55□□□□□ -2.16
Ccdc40Q8BI79 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.55□□□□□ -2.16
Ccdc40Q8BI79 Gm23379-201ENSMUST00000180026 107 ntBASIC1.55□□□□□ -2.16
Ccdc40Q8BI79 Gm27755-201ENSMUST00000184623 132 ntBASIC1.55□□□□□ -2.16
Ccdc40Q8BI79 Gm27421-201ENSMUST00000184729 167 ntBASIC1.55□□□□□ -2.16
Ccdc40Q8BI79 Gm28597-201ENSMUST00000187664 666 ntBASIC1.55□□□□□ -2.16
Ccdc40Q8BI79 Gm29037-201ENSMUST00000189092 313 ntBASIC1.55□□□□□ -2.16
Ccdc40Q8BI79 Gm45296-201ENSMUST00000209625 205 ntBASIC1.55□□□□□ -2.16
Ccdc40Q8BI79 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.55□□□□□ -2.16
Ccdc40Q8BI79 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Ccdc40Q8BI79 Gm25495-201ENSMUST00000104431 131 ntBASIC1.54□□□□□ -2.16
Ccdc40Q8BI79 Gm8121-201ENSMUST00000153583 499 ntBASIC1.54□□□□□ -2.16
Ccdc40Q8BI79 Gm25392-201ENSMUST00000157335 297 ntBASIC1.54□□□□□ -2.16
Ccdc40Q8BI79 Mir7017-201ENSMUST00000184894 62 ntBASIC1.54□□□□□ -2.16
Ccdc40Q8BI79 Gm44491-201ENSMUST00000196794 96 ntBASIC1.54□□□□□ -2.16
Ccdc40Q8BI79 Gm23370-201ENSMUST00000199545 130 ntBASIC1.54□□□□□ -2.16
Ccdc40Q8BI79 Gm18617-201ENSMUST00000222311 259 ntBASIC1.54□□□□□ -2.16
Ccdc40Q8BI79 Snord68-201ENSMUST00000082516 86 ntBASIC1.54□□□□□ -2.16
Ccdc40Q8BI79 Gm15115-201ENSMUST00000121145 264 ntBASIC1.53□□□□□ -2.16
Ccdc40Q8BI79 Gm15529-201ENSMUST00000121833 994 ntBASIC1.53□□□□□ -2.16
Ccdc40Q8BI79 Gm24632-201ENSMUST00000122770 323 ntBASIC1.53□□□□□ -2.16
Ccdc40Q8BI79 Gm22537-201ENSMUST00000158172 199 ntBASIC1.53□□□□□ -2.16
Ccdc40Q8BI79 Gm27313-201ENSMUST00000183500 142 ntBASIC1.53□□□□□ -2.16
Ccdc40Q8BI79 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.53□□□□□ -2.16
Ccdc40Q8BI79 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.53□□□□□ -2.16
Ccdc40Q8BI79 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Ccdc40Q8BI79 Gm5899-201ENSMUST00000071770 270 ntBASIC1.53□□□□□ -2.16
Ccdc40Q8BI79 Gm26314-201ENSMUST00000083891 107 ntBASIC1.53□□□□□ -2.16
Ccdc40Q8BI79 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.52□□□□□ -2.17
Ccdc40Q8BI79 Gm23951-201ENSMUST00000104029 132 ntBASIC1.52□□□□□ -2.17
Ccdc40Q8BI79 Gm23010-201ENSMUST00000104151 126 ntBASIC1.52□□□□□ -2.17
Ccdc40Q8BI79 Gm25559-201ENSMUST00000157182 74 ntBASIC1.52□□□□□ -2.17
Ccdc40Q8BI79 Gm24915-201ENSMUST00000157288 78 ntBASIC1.52□□□□□ -2.17
Ccdc40Q8BI79 Gm17148-201ENSMUST00000164702 249 ntBASIC1.52□□□□□ -2.17
Ccdc40Q8BI79 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.52□□□□□ -2.17
Ccdc40Q8BI79 Gm27711-201ENSMUST00000183802 118 ntBASIC1.52□□□□□ -2.17
Ccdc40Q8BI79 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1.52□□□□□ -2.17
Ccdc40Q8BI79 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.52□□□□□ -2.17
Ccdc40Q8BI79 Mir320-201ENSMUST00000083594 82 ntBASIC1.52□□□□□ -2.17
Ccdc40Q8BI79 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm11862-201ENSMUST00000119678 659 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm14269-201ENSMUST00000120455 306 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm22559-201ENSMUST00000157329 134 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm23208-201ENSMUST00000158666 127 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm24668-201ENSMUST00000158935 104 ntBASIC1.51□□□□□ -2.17
Ccdc40Q8BI79 Gm27817-201ENSMUST00000184302 233 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms