Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm15733-201ENSMUST00000132957 242 ntBASIC3.03□□□□□ -1.92
Pif1Q80SX8 Gm24837-201ENSMUST00000158683 81 ntBASIC3.03□□□□□ -1.92
Pif1Q80SX8 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Pif1Q80SX8 Mir466b-4-201ENSMUST00000178801 90 ntBASIC3.03□□□□□ -1.92
Pif1Q80SX8 Gm25285-201ENSMUST00000178951 90 ntBASIC3.03□□□□□ -1.92
Pif1Q80SX8 Mir466b-6-201ENSMUST00000180061 90 ntBASIC3.03□□□□□ -1.92
Pif1Q80SX8 Mir466c-2-201ENSMUST00000180211 90 ntBASIC3.03□□□□□ -1.92
Pif1Q80SX8 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.03□□□□□ -1.92
Pif1Q80SX8 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.03□□□□□ -1.92
Pif1Q80SX8 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Pif1Q80SX8 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.02□□□□□ -1.93
Pif1Q80SX8 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Pif1Q80SX8 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Pif1Q80SX8 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Pif1Q80SX8 Mir881-201ENSMUST00000104844 78 ntBASIC3.02□□□□□ -1.93
Pif1Q80SX8 Gm12042-201ENSMUST00000120479 301 ntBASIC3.02□□□□□ -1.93
Pif1Q80SX8 Gm26426-201ENSMUST00000177866 123 ntBASIC3.02□□□□□ -1.93
Pif1Q80SX8 Gm26435-201ENSMUST00000179026 107 ntBASIC3.02□□□□□ -1.93
Pif1Q80SX8 Gm26060-201ENSMUST00000180094 123 ntBASIC3.02□□□□□ -1.93
Pif1Q80SX8 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.02□□□□□ -1.93
Pif1Q80SX8 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.02□□□□□ -1.93
Pif1Q80SX8 CT030687.1-201ENSMUST00000221854 162 ntBASIC3.02□□□□□ -1.93
Pif1Q80SX8 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Pif1Q80SX8 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.01□□□□□ -1.93
Pif1Q80SX8 Gm24049-201ENSMUST00000102409 100 ntBASIC3.01□□□□□ -1.93
Pif1Q80SX8 Gm25539-201ENSMUST00000116886 122 ntBASIC3.01□□□□□ -1.93
Pif1Q80SX8 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.01□□□□□ -1.93
Pif1Q80SX8 Gm14389-201ENSMUST00000140453 241 ntBASIC3.01□□□□□ -1.93
Pif1Q80SX8 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC3.01□□□□□ -1.93
Pif1Q80SX8 Gm22510-201ENSMUST00000179304 79 ntBASIC3.01□□□□□ -1.93
Pif1Q80SX8 Gm26336-201ENSMUST00000179449 79 ntBASIC3.01□□□□□ -1.93
Pif1Q80SX8 Gm26390-201ENSMUST00000179628 79 ntBASIC3.01□□□□□ -1.93
Pif1Q80SX8 Gm27878-201ENSMUST00000184000 106 ntBASIC3.01□□□□□ -1.93
Pif1Q80SX8 Gm10025-201ENSMUST00000079568 372 ntBASIC3.01□□□□□ -1.93
Pif1Q80SX8 Gm24204-201ENSMUST00000082950 107 ntBASIC3.01□□□□□ -1.93
Pif1Q80SX8 Gm13136-201ENSMUST00000121031 2950 ntBASIC3.01□□□□□ -1.93
Pif1Q80SX8 AC122828.3-201ENSMUST00000223019 3915 ntBASIC3.01□□□□□ -1.93
Pif1Q80SX8 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Pif1Q80SX8 Gm12858-201ENSMUST00000121913 208 ntBASIC3□□□□□ -1.93
Pif1Q80SX8 Gm25961-201ENSMUST00000157174 135 ntBASIC3□□□□□ -1.93
Pif1Q80SX8 Gm23668-201ENSMUST00000157465 111 ntBASIC3□□□□□ -1.93
Pif1Q80SX8 Gm22722-201ENSMUST00000157467 132 ntBASIC3□□□□□ -1.93
Pif1Q80SX8 Gm23892-201ENSMUST00000158105 130 ntBASIC3□□□□□ -1.93
Pif1Q80SX8 Gm22833-201ENSMUST00000158292 132 ntBASIC3□□□□□ -1.93
Pif1Q80SX8 Gm20672-201ENSMUST00000176605 261 ntBASIC3□□□□□ -1.93
Pif1Q80SX8 Gm23002-201ENSMUST00000179221 107 ntBASIC3□□□□□ -1.93
Pif1Q80SX8 Gm27648-201ENSMUST00000184315 107 ntBASIC3□□□□□ -1.93
Pif1Q80SX8 Mir6914-201ENSMUST00000184999 69 ntBASIC3□□□□□ -1.93
Pif1Q80SX8 Gm28358-202ENSMUST00000189292 223 ntBASIC3□□□□□ -1.93
Pif1Q80SX8 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3□□□□□ -1.93
Pif1Q80SX8 Mir3961-201ENSMUST00000198795 59 ntBASIC3□□□□□ -1.93
Pif1Q80SX8 Gm44555-201ENSMUST00000209008 148 ntBASIC3□□□□□ -1.93
Pif1Q80SX8 Gm45791-201ENSMUST00000212908 352 ntBASIC3□□□□□ -1.93
Pif1Q80SX8 AC132615.1-201ENSMUST00000213873 255 ntBASIC3□□□□□ -1.93
Pif1Q80SX8 Gm23615-201ENSMUST00000082602 65 ntBASIC3□□□□□ -1.93
Pif1Q80SX8 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.99□□□□□ -1.93
Pif1Q80SX8 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Pif1Q80SX8 Gm23841-201ENSMUST00000116951 114 ntBASIC2.99□□□□□ -1.93
Pif1Q80SX8 Gm15190-201ENSMUST00000120855 276 ntBASIC2.99□□□□□ -1.93
Pif1Q80SX8 Gm11204-201ENSMUST00000122438 147 ntBASIC2.99□□□□□ -1.93
Pif1Q80SX8 Gm23324-201ENSMUST00000157421 131 ntBASIC2.99□□□□□ -1.93
Pif1Q80SX8 Gm23671-201ENSMUST00000157472 103 ntBASIC2.99□□□□□ -1.93
Pif1Q80SX8 Gm23258-201ENSMUST00000158319 106 ntBASIC2.99□□□□□ -1.93
Pif1Q80SX8 Gm22532-201ENSMUST00000158822 140 ntBASIC2.99□□□□□ -1.93
Pif1Q80SX8 Gm17161-201ENSMUST00000169187 524 ntBASIC2.99□□□□□ -1.93
Pif1Q80SX8 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Pif1Q80SX8 Gm24510-201ENSMUST00000174965 94 ntBASIC2.99□□□□□ -1.93
Pif1Q80SX8 Gm24813-201ENSMUST00000175310 84 ntBASIC2.99□□□□□ -1.93
Pif1Q80SX8 Mir3106-201ENSMUST00000175401 82 ntBASIC2.99□□□□□ -1.93
Pif1Q80SX8 Mir6917-201ENSMUST00000184111 61 ntBASIC2.99□□□□□ -1.93
Pif1Q80SX8 Gm28282-201ENSMUST00000186072 186 ntBASIC2.99□□□□□ -1.93
Pif1Q80SX8 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC2.99□□□□□ -1.93
Pif1Q80SX8 Gm44964-201ENSMUST00000207011 273 ntBASIC2.99□□□□□ -1.93
Pif1Q80SX8 CT954323.1-201ENSMUST00000222774 229 ntBASIC2.99□□□□□ -1.93
Pif1Q80SX8 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
Pif1Q80SX8 Gm23039-201ENSMUST00000083870 161 ntBASIC2.99□□□□□ -1.93
Pif1Q80SX8 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Pif1Q80SX8 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
Pif1Q80SX8 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Pif1Q80SX8 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.98□□□□□ -1.93
Pif1Q80SX8 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
Pif1Q80SX8 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Pif1Q80SX8 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Pif1Q80SX8 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.98□□□□□ -1.93
Pif1Q80SX8 Gm24280-201ENSMUST00000104237 134 ntBASIC2.98□□□□□ -1.93
Pif1Q80SX8 Gm3788-201ENSMUST00000119949 136 ntBASIC2.98□□□□□ -1.93
Pif1Q80SX8 Gm16021-201ENSMUST00000121176 219 ntBASIC2.98□□□□□ -1.93
Pif1Q80SX8 Gm15986-201ENSMUST00000122153 400 ntBASIC2.98□□□□□ -1.93
Pif1Q80SX8 Gm18546-201ENSMUST00000197245 676 ntBASIC2.98□□□□□ -1.93
Pif1Q80SX8 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.98□□□□□ -1.93
Pif1Q80SX8 Mir340-201ENSMUST00000083483 98 ntBASIC2.98□□□□□ -1.93
Pif1Q80SX8 Gm37158-201ENSMUST00000191652 5704 ntBASIC2.98□□□□□ -1.93
Pif1Q80SX8 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Pif1Q80SX8 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.97□□□□□ -1.93
Pif1Q80SX8 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Pif1Q80SX8 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Pif1Q80SX8 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.97□□□□□ -1.93
Pif1Q80SX8 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.97□□□□□ -1.93
Pif1Q80SX8 Mir541-201ENSMUST00000102097 90 ntBASIC2.97□□□□□ -1.93
Pif1Q80SX8 Gm13761-201ENSMUST00000117238 807 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 153.6 ms