Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm22622-201ENSMUST00000082870 129 ntBASIC2.59□□□□□ -1.99
Ubfd1Q78JW9 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
Ubfd1Q78JW9 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
Ubfd1Q78JW9 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
Ubfd1Q78JW9 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Ubfd1Q78JW9 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Ubfd1Q78JW9 Gm23013-201ENSMUST00000104146 106 ntBASIC2.58□□□□□ -2
Ubfd1Q78JW9 Gm11936-201ENSMUST00000118323 160 ntBASIC2.58□□□□□ -2
Ubfd1Q78JW9 Gm22483-201ENSMUST00000157986 274 ntBASIC2.58□□□□□ -2
Ubfd1Q78JW9 Gm25718-201ENSMUST00000158632 118 ntBASIC2.58□□□□□ -2
Ubfd1Q78JW9 Gm24736-201ENSMUST00000158862 130 ntBASIC2.58□□□□□ -2
Ubfd1Q78JW9 Mir3076-201ENSMUST00000175415 60 ntBASIC2.58□□□□□ -2
Ubfd1Q78JW9 Gm24304-201ENSMUST00000177635 107 ntBASIC2.58□□□□□ -2
Ubfd1Q78JW9 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC2.58□□□□□ -2
Ubfd1Q78JW9 Gm27540-201ENSMUST00000184950 187 ntBASIC2.58□□□□□ -2
Ubfd1Q78JW9 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.58□□□□□ -2
Ubfd1Q78JW9 Gm29597-201ENSMUST00000188035 308 ntBASIC2.58□□□□□ -2
Ubfd1Q78JW9 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC2.58□□□□□ -2
Ubfd1Q78JW9 Gm26265-202ENSMUST00000196326 133 ntBASIC2.58□□□□□ -2
Ubfd1Q78JW9 AC125374.2-201ENSMUST00000214278 162 ntBASIC2.58□□□□□ -2
Ubfd1Q78JW9 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.58□□□□□ -2
Ubfd1Q78JW9 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Ubfd1Q78JW9 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Ubfd1Q78JW9 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.58□□□□□ -2
Ubfd1Q78JW9 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Ubfd1Q78JW9 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.57□□□□□ -2
Ubfd1Q78JW9 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.57□□□□□ -2
Ubfd1Q78JW9 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.57□□□□□ -2
Ubfd1Q78JW9 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ubfd1Q78JW9 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC2.57□□□□□ -2
Ubfd1Q78JW9 Gm25392-201ENSMUST00000157335 297 ntBASIC2.57□□□□□ -2
Ubfd1Q78JW9 Gm22537-201ENSMUST00000158172 199 ntBASIC2.57□□□□□ -2
Ubfd1Q78JW9 Snord11-201ENSMUST00000158468 84 ntBASIC2.57□□□□□ -2
Ubfd1Q78JW9 Gm19901-201ENSMUST00000192191 495 ntBASIC2.57□□□□□ -2
Ubfd1Q78JW9 Gm43264-201ENSMUST00000202284 325 ntBASIC2.57□□□□□ -2
Ubfd1Q78JW9 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC2.57□□□□□ -2
Ubfd1Q78JW9 Gm19118-201ENSMUST00000222554 98 ntBASIC2.57□□□□□ -2
Ubfd1Q78JW9 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.57□□□□□ -2
Ubfd1Q78JW9 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ubfd1Q78JW9 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ubfd1Q78JW9 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.56□□□□□ -2
Ubfd1Q78JW9 Gm13880-201ENSMUST00000118421 474 ntBASIC2.56□□□□□ -2
Ubfd1Q78JW9 Gm12926-201ENSMUST00000121158 409 ntBASIC2.56□□□□□ -2
Ubfd1Q78JW9 Gm22027-201ENSMUST00000122737 127 ntBASIC2.56□□□□□ -2
Ubfd1Q78JW9 Gm25488-201ENSMUST00000158728 118 ntBASIC2.56□□□□□ -2
Ubfd1Q78JW9 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.56□□□□□ -2
Ubfd1Q78JW9 Gm20144-201ENSMUST00000203031 165 ntBASIC2.56□□□□□ -2
Ubfd1Q78JW9 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.56□□□□□ -2
Ubfd1Q78JW9 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.56□□□□□ -2
Ubfd1Q78JW9 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.56□□□□□ -2
Ubfd1Q78JW9 Gm9795-201ENSMUST00000062156 693 ntBASIC2.56□□□□□ -2
Ubfd1Q78JW9 Gm26126-201ENSMUST00000083188 164 ntBASIC2.56□□□□□ -2
Ubfd1Q78JW9 Gm23264-201ENSMUST00000083372 107 ntBASIC2.56□□□□□ -2
Ubfd1Q78JW9 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC2.56□□□□□ -2
Ubfd1Q78JW9 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ubfd1Q78JW9 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ubfd1Q78JW9 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ubfd1Q78JW9 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
Ubfd1Q78JW9 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ubfd1Q78JW9 Gm22195-201ENSMUST00000116861 108 ntBASIC2.55□□□□□ -2
Ubfd1Q78JW9 Gm6574-201ENSMUST00000120037 362 ntBASIC2.55□□□□□ -2
Ubfd1Q78JW9 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.55□□□□□ -2
Ubfd1Q78JW9 Gm22858-201ENSMUST00000174972 76 ntBASIC2.55□□□□□ -2
Ubfd1Q78JW9 Gm24573-201ENSMUST00000175499 112 ntBASIC2.55□□□□□ -2
Ubfd1Q78JW9 Gm27330-201ENSMUST00000184689 132 ntBASIC2.55□□□□□ -2
Ubfd1Q78JW9 Gm28900-201ENSMUST00000185232 156 ntBASIC2.55□□□□□ -2
Ubfd1Q78JW9 Mir7118-201ENSMUST00000197760 61 ntBASIC2.55□□□□□ -2
Ubfd1Q78JW9 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Ubfd1Q78JW9 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.55□□□□□ -2
Ubfd1Q78JW9 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.55□□□□□ -2
Ubfd1Q78JW9 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Ubfd1Q78JW9 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Ubfd1Q78JW9 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ubfd1Q78JW9 Gm22984-201ENSMUST00000122751 122 ntBASIC2.54□□□□□ -2
Ubfd1Q78JW9 Gm22416-201ENSMUST00000158590 88 ntBASIC2.54□□□□□ -2
Ubfd1Q78JW9 Gm25119-201ENSMUST00000158815 88 ntBASIC2.54□□□□□ -2
Ubfd1Q78JW9 Gm24082-201ENSMUST00000175175 83 ntBASIC2.54□□□□□ -2
Ubfd1Q78JW9 Gm29140-201ENSMUST00000190187 476 ntBASIC2.54□□□□□ -2
Ubfd1Q78JW9 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC2.54□□□□□ -2
Ubfd1Q78JW9 Mir465d-201ENSMUST00000196314 58 ntBASIC2.54□□□□□ -2
Ubfd1Q78JW9 Gm43676-201ENSMUST00000197532 540 ntBASIC2.54□□□□□ -2
Ubfd1Q78JW9 Gm44256-201ENSMUST00000203304 335 ntBASIC2.54□□□□□ -2
Ubfd1Q78JW9 Gm43993-201ENSMUST00000203972 247 ntBASIC2.54□□□□□ -2
Ubfd1Q78JW9 Gm44182-201ENSMUST00000204052 115 ntBASIC2.54□□□□□ -2
Ubfd1Q78JW9 Gm44977-201ENSMUST00000205283 420 ntBASIC2.54□□□□□ -2
Ubfd1Q78JW9 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC2.54□□□□□ -2
Ubfd1Q78JW9 Gm45879-201ENSMUST00000212521 392 ntBASIC2.54□□□□□ -2
Ubfd1Q78JW9 mt-Ti-201ENSMUST00000082393 69 ntBASIC2.54□□□□□ -2
Ubfd1Q78JW9 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.54□□□□□ -2
Ubfd1Q78JW9 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.54□□□□□ -2
Ubfd1Q78JW9 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.53□□□□□ -2
Ubfd1Q78JW9 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.53□□□□□ -2
Ubfd1Q78JW9 Gm11786-201ENSMUST00000120799 155 ntBASIC2.53□□□□□ -2
Ubfd1Q78JW9 Gm24896-201ENSMUST00000122741 135 ntBASIC2.53□□□□□ -2
Ubfd1Q78JW9 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.53□□□□□ -2
Ubfd1Q78JW9 Gm23409-201ENSMUST00000158516 237 ntBASIC2.53□□□□□ -2
Ubfd1Q78JW9 Gm22500-201ENSMUST00000158982 99 ntBASIC2.53□□□□□ -2
Ubfd1Q78JW9 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Ubfd1Q78JW9 Mir28b-201ENSMUST00000175399 80 ntBASIC2.53□□□□□ -2
Ubfd1Q78JW9 Gm20613-201ENSMUST00000175828 345 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 131.5 ms