Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Gm43035-201ENSMUST00000197626 517 ntBASIC0.23□□□□□ -2.37
Topbp1Q6ZQF0 Gm44232-201ENSMUST00000204537 225 ntBASIC0.23□□□□□ -2.37
Topbp1Q6ZQF0 Gm44088-201ENSMUST00000204595 237 ntBASIC0.23□□□□□ -2.37
Topbp1Q6ZQF0 Gm44961-201ENSMUST00000207450 196 ntBASIC0.23□□□□□ -2.37
Topbp1Q6ZQF0 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.23□□□□□ -2.37
Topbp1Q6ZQF0 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.23□□□□□ -2.37
Topbp1Q6ZQF0 Gm27545-201ENSMUST00000184755 202 ntBASIC0.23□□□□□ -2.37
Topbp1Q6ZQF0 Gm18252-203ENSMUST00000215855 757 ntBASIC0.23□□□□□ -2.37
Topbp1Q6ZQF0 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.23□□□□□ -2.37
Topbp1Q6ZQF0 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC0.22□□□□□ -2.37
Topbp1Q6ZQF0 Gm24896-201ENSMUST00000122741 135 ntBASIC0.22□□□□□ -2.37
Topbp1Q6ZQF0 Gm26150-201ENSMUST00000157426 151 ntBASIC0.22□□□□□ -2.37
Topbp1Q6ZQF0 Gm26405-201ENSMUST00000158495 100 ntBASIC0.22□□□□□ -2.37
Topbp1Q6ZQF0 Mir3473c-201ENSMUST00000175262 81 ntBASIC0.22□□□□□ -2.37
Topbp1Q6ZQF0 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.22□□□□□ -2.37
Topbp1Q6ZQF0 Gm22392-201ENSMUST00000177971 107 ntBASIC0.22□□□□□ -2.37
Topbp1Q6ZQF0 Gm22111-201ENSMUST00000178010 79 ntBASIC0.22□□□□□ -2.37
Topbp1Q6ZQF0 Gm23687-201ENSMUST00000178664 79 ntBASIC0.22□□□□□ -2.37
Topbp1Q6ZQF0 Gm24566-201ENSMUST00000179286 79 ntBASIC0.22□□□□□ -2.37
Topbp1Q6ZQF0 Gm23305-201ENSMUST00000179342 79 ntBASIC0.22□□□□□ -2.37
Topbp1Q6ZQF0 Gm26389-201ENSMUST00000179819 79 ntBASIC0.22□□□□□ -2.37
Topbp1Q6ZQF0 Gm22130-201ENSMUST00000179979 79 ntBASIC0.22□□□□□ -2.37
Topbp1Q6ZQF0 Gm22393-201ENSMUST00000180153 79 ntBASIC0.22□□□□□ -2.37
Topbp1Q6ZQF0 Gm25085-201ENSMUST00000180298 79 ntBASIC0.22□□□□□ -2.37
Topbp1Q6ZQF0 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC0.22□□□□□ -2.37
Topbp1Q6ZQF0 Gm18703-201ENSMUST00000215318 333 ntBASIC0.22□□□□□ -2.37
Topbp1Q6ZQF0 Gm23462-201ENSMUST00000083264 104 ntBASIC0.22□□□□□ -2.37
Topbp1Q6ZQF0 Gm22221-201ENSMUST00000157362 103 ntBASIC0.21□□□□□ -2.38
Topbp1Q6ZQF0 Gm20613-201ENSMUST00000175828 345 ntBASIC0.21□□□□□ -2.38
Topbp1Q6ZQF0 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.21□□□□□ -2.38
Topbp1Q6ZQF0 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC0.21□□□□□ -2.38
Topbp1Q6ZQF0 Gm25851-201ENSMUST00000082794 107 ntBASIC0.21□□□□□ -2.38
Topbp1Q6ZQF0 Gm43924-201ENSMUST00000204851 1736 ntBASIC0.2□□□□□ -2.38
Topbp1Q6ZQF0 Gm14913-201ENSMUST00000120011 1093 ntBASIC0.2□□□□□ -2.38
Topbp1Q6ZQF0 Gm23106-201ENSMUST00000157554 101 ntBASIC0.2□□□□□ -2.38
Topbp1Q6ZQF0 Scarna8-201ENSMUST00000158333 131 ntBASIC0.2□□□□□ -2.38
Topbp1Q6ZQF0 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.2□□□□□ -2.38
Topbp1Q6ZQF0 Gm37713-201ENSMUST00000191746 198 ntBASIC0.2□□□□□ -2.38
Topbp1Q6ZQF0 AC154552.7-201ENSMUST00000222824 156 ntBASIC0.2□□□□□ -2.38
Topbp1Q6ZQF0 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.2□□□□□ -2.38
Topbp1Q6ZQF0 AC167977.2-201ENSMUST00000225676 682 ntBASIC0.2□□□□□ -2.38
Topbp1Q6ZQF0 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.2□□□□□ -2.38
Topbp1Q6ZQF0 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC0.19□□□□□ -2.38
Topbp1Q6ZQF0 AC124426.1-203ENSMUST00000221814 1362 ntBASIC0.19□□□□□ -2.38
Topbp1Q6ZQF0 AA413626-201ENSMUST00000121125 494 ntBASIC0.19□□□□□ -2.38
Topbp1Q6ZQF0 Gm16412-201ENSMUST00000121602 273 ntBASIC0.19□□□□□ -2.38
Topbp1Q6ZQF0 Gm23317-201ENSMUST00000157999 129 ntBASIC0.19□□□□□ -2.38
Topbp1Q6ZQF0 Gm22675-201ENSMUST00000158430 104 ntBASIC0.19□□□□□ -2.38
Topbp1Q6ZQF0 Mir15a-201ENSMUST00000175266 84 ntBASIC0.19□□□□□ -2.38
Topbp1Q6ZQF0 Gm22802-201ENSMUST00000175621 89 ntBASIC0.19□□□□□ -2.38
Topbp1Q6ZQF0 Gm26914-201ENSMUST00000182262 223 ntBASIC0.19□□□□□ -2.38
Topbp1Q6ZQF0 Gm18667-201ENSMUST00000186523 484 ntBASIC0.19□□□□□ -2.38
Topbp1Q6ZQF0 Gm37869-201ENSMUST00000193385 595 ntBASIC0.19□□□□□ -2.38
Topbp1Q6ZQF0 Gm10297-201ENSMUST00000207136 651 ntBASIC0.19□□□□□ -2.38
Topbp1Q6ZQF0 Gm45704-201ENSMUST00000212582 403 ntBASIC0.19□□□□□ -2.38
Topbp1Q6ZQF0 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
Topbp1Q6ZQF0 Gm22620-201ENSMUST00000082700 133 ntBASIC0.19□□□□□ -2.38
Topbp1Q6ZQF0 Mir5104-201ENSMUST00000175319 94 ntBASIC0.18□□□□□ -2.38
Topbp1Q6ZQF0 Gm28412-201ENSMUST00000187243 177 ntBASIC0.18□□□□□ -2.38
Topbp1Q6ZQF0 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC0.18□□□□□ -2.38
Topbp1Q6ZQF0 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC0.18□□□□□ -2.38
Topbp1Q6ZQF0 AC156795.1-201ENSMUST00000214655 414 ntBASIC0.18□□□□□ -2.38
Topbp1Q6ZQF0 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.18□□□□□ -2.38
Topbp1Q6ZQF0 AC154692.1-201ENSMUST00000228314 544 ntBASIC0.18□□□□□ -2.38
Topbp1Q6ZQF0 Gm11219-201ENSMUST00000118565 358 ntBASIC0.18□□□□□ -2.38
Topbp1Q6ZQF0 Gm25393-201ENSMUST00000157336 285 ntBASIC0.18□□□□□ -2.38
Topbp1Q6ZQF0 Gm23390-201ENSMUST00000157393 106 ntBASIC0.18□□□□□ -2.38
Topbp1Q6ZQF0 Gm26487-201ENSMUST00000158022 94 ntBASIC0.18□□□□□ -2.38
Topbp1Q6ZQF0 Gm24678-201ENSMUST00000158756 104 ntBASIC0.18□□□□□ -2.38
Topbp1Q6ZQF0 Gm22403-201ENSMUST00000174919 84 ntBASIC0.18□□□□□ -2.38
Topbp1Q6ZQF0 Gm27342-201ENSMUST00000183530 109 ntBASIC0.18□□□□□ -2.38
Topbp1Q6ZQF0 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC0.18□□□□□ -2.38
Topbp1Q6ZQF0 Gm44429-201ENSMUST00000203542 186 ntBASIC0.18□□□□□ -2.38
Topbp1Q6ZQF0 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.18□□□□□ -2.38
Topbp1Q6ZQF0 Gm24311-201ENSMUST00000082570 104 ntBASIC0.18□□□□□ -2.38
Topbp1Q6ZQF0 Gm25650-201ENSMUST00000083784 162 ntBASIC0.18□□□□□ -2.38
Topbp1Q6ZQF0 Gm14624-201ENSMUST00000117746 192 ntBASIC0.17□□□□□ -2.38
Topbp1Q6ZQF0 Gm14359-201ENSMUST00000118883 424 ntBASIC0.17□□□□□ -2.38
Topbp1Q6ZQF0 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.17□□□□□ -2.38
Topbp1Q6ZQF0 Gm15274-201ENSMUST00000131442 291 ntBASIC0.17□□□□□ -2.38
Topbp1Q6ZQF0 Gm21979-201ENSMUST00000139887 291 ntBASIC0.17□□□□□ -2.38
Topbp1Q6ZQF0 Gm9498-201ENSMUST00000140849 291 ntBASIC0.17□□□□□ -2.38
Topbp1Q6ZQF0 Gm14368-201ENSMUST00000145305 415 ntBASIC0.17□□□□□ -2.38
Topbp1Q6ZQF0 Gm15259-201ENSMUST00000151262 291 ntBASIC0.17□□□□□ -2.38
Topbp1Q6ZQF0 Gm15279-201ENSMUST00000155593 288 ntBASIC0.17□□□□□ -2.38
Topbp1Q6ZQF0 Gm24559-201ENSMUST00000157519 121 ntBASIC0.17□□□□□ -2.38
Topbp1Q6ZQF0 Gm22765-201ENSMUST00000158371 128 ntBASIC0.17□□□□□ -2.38
Topbp1Q6ZQF0 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC0.17□□□□□ -2.38
Topbp1Q6ZQF0 Mir3061-201ENSMUST00000175129 91 ntBASIC0.17□□□□□ -2.38
Topbp1Q6ZQF0 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC0.17□□□□□ -2.38
Topbp1Q6ZQF0 Gm43026-201ENSMUST00000202972 325 ntBASIC0.17□□□□□ -2.38
Topbp1Q6ZQF0 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC0.17□□□□□ -2.38
Topbp1Q6ZQF0 Snord95-201ENSMUST00000082846 68 ntBASIC0.17□□□□□ -2.38
Topbp1Q6ZQF0 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.17□□□□□ -2.38
Topbp1Q6ZQF0 AC125532.1-201ENSMUST00000216210 2334 ntBASIC0.16□□□□□ -2.38
Topbp1Q6ZQF0 Gm23589-201ENSMUST00000157660 105 ntBASIC0.16□□□□□ -2.38
Topbp1Q6ZQF0 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.16□□□□□ -2.38
Topbp1Q6ZQF0 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.16□□□□□ -2.38
Topbp1Q6ZQF0 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.16□□□□□ -2.38
Topbp1Q6ZQF0 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.16□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms